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NM_016356.5(DCDC2):c.840AGA[1] (p.Glu281del) AND multiple conditions

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Feb 16, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002489885.1

Allele description [Variation Report for NM_016356.5(DCDC2):c.840AGA[1] (p.Glu281del)]

NM_016356.5(DCDC2):c.840AGA[1] (p.Glu281del)

Gene:
DCDC2:doublecortin domain containing 2 [Gene - OMIM - HGNC]
Variant type:
Microsatellite
Cytogenetic location:
6p22.3
Genomic location:
Preferred name:
NM_016356.5(DCDC2):c.840AGA[1] (p.Glu281del)
HGVS:
  • NC_000006.12:g.24278127CTT[1]
  • NG_012829.2:g.110162AGA[1]
  • NM_001195610.2:c.840AGA[1]
  • NM_016356.5:c.840AGA[1]MANE SELECT
  • NP_001182539.1:p.Glu281del
  • NP_057440.2:p.Glu281del
  • NC_000006.11:g.24278354_24278356del
  • NC_000006.11:g.24278355CTT[1]
  • NM_016356.4:c.843_845del
  • NM_016356.5:c.843_845delMANE SELECT
Protein change:
E281del
Links:
dbSNP: rs760375899
NCBI 1000 Genomes Browser:
rs760375899
Molecular consequence:
  • NM_001195610.2:c.840AGA[1] - inframe_deletion - [Sequence Ontology: SO:0001822]
  • NM_016356.5:c.840AGA[1] - inframe_deletion - [Sequence Ontology: SO:0001822]

Condition(s)

Name:
Autosomal recessive nonsyndromic hearing loss 66 (DFNB66)
Synonyms:
Deafness, autosomal recessive 66
Identifiers:
MONDO: MONDO:0012442; MedGen: C1857750; Orphanet: 90636; OMIM: 610212
Name:
Nephronophthisis 19 (NPHP19)
Identifiers:
MONDO: MONDO:0014537; MedGen: C4015542; Orphanet: 84081; OMIM: 616217
Name:
Isolated neonatal sclerosing cholangitis (NSC)
Synonyms:
Sclerosing cholangitis, neonatal
Identifiers:
MONDO: MONDO:0018816; MedGen: C4479344; OMIM: 617394

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002778212Fulgent Genetics, Fulgent Genetics
criteria provided, single submitter

(ACMG Guidelines, 2015)		Uncertain significance
(Feb 16, 2022) 		unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee.

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Fulgent Genetics, Fulgent Genetics, SCV002778212.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 8, 2024