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NC_000023.11:g.70027876_70027911del AND multiple conditions

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Feb 20, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002482984.1

Allele description [Variation Report for NC_000023.11:g.70027876_70027911del]

NC_000023.11:g.70027876_70027911del

Gene:
EDA:ectodysplasin A [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
Xq13.1
Genomic location:
Preferred name:
NC_000023.11:g.70027876_70027911del
HGVS:
  • NC_000023.11:g.70027876_70027911del
  • NG_009809.2:g.416810_416845del
  • NM_001005609.2:c.546_581del
  • NM_001005612.3:c.546_581del
  • NM_001399.5:c.546_581delMANE SELECT
  • NP_001005609.1:p.Asn185_Pro196del
  • NP_001005612.2:p.Asn185_Pro196del
  • NP_001390.1:p.Asn185_Pro196del
  • NC_000023.10:g.69247716_69247751del
  • NC_000023.10:g.69247726_69247761del
  • NM_001399.4:c.546_581delTGGACCCAATGGCCCTCCAGGACCCCCAGGACCTCC
  • c.546_581del
Links:
dbSNP: rs397516665
NCBI 1000 Genomes Browser:
rs397516665

Condition(s)

Name:
Hypohidrotic X-linked ectodermal dysplasia (XHED)
Synonyms:
ECTODERMAL DYSPLASIA, HYPOHIDROTIC, 1; Anhidrotic ectodermal dysplasia X-linked; Christ Siemens Touraine syndrome; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0010585; MedGen: C0162359; Orphanet: 181; Orphanet: 238468; OMIM: 305100
Name:
Tooth agenesis, selective, X-linked, 1 (STHAGX1)
Synonyms:
HYPODONTIA/OLIGODONTIA, X-LINKED, 1
Identifiers:
MONDO: MONDO:0010741; MedGen: C1970757; Orphanet: 99798; OMIM: 313500

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002778137Fulgent Genetics, Fulgent Genetics
criteria provided, single submitter

(ACMG Guidelines, 2015)		Pathogenic
(Feb 20, 2022) 		unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee.

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Fulgent Genetics, Fulgent Genetics, SCV002778137.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 8, 2024