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NM_022168.4(IFIH1):c.2216_2222del (p.Thr739fs) AND multiple conditions

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Aug 27, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002481867.1

Allele description [Variation Report for NM_022168.4(IFIH1):c.2216_2222del (p.Thr739fs)]

NM_022168.4(IFIH1):c.2216_2222del (p.Thr739fs)

Gene:
IFIH1:interferon induced with helicase C domain 1 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
2q24.2
Genomic location:
Preferred name:
NM_022168.4(IFIH1):c.2216_2222del (p.Thr739fs)
HGVS:
  • NC_000002.12:g.162276770_162276776del
  • NG_011495.1:g.46755_46761del
  • NM_022168.4:c.2216_2222delMANE SELECT
  • NP_071451.2:p.Thr739fs
  • LRG_1235t1:c.2216_2222del
  • LRG_1235:g.46755_46761del
  • LRG_1235p1:p.Thr739fs
  • NC_000002.11:g.163133279_163133285del
  • NC_000002.11:g.163133280_163133286del
  • NM_022168.3:c.2216_2222del
Protein change:
T739fs
Links:
dbSNP: rs745948096
NCBI 1000 Genomes Browser:
rs745948096
Molecular consequence:
  • NM_022168.4:c.2216_2222del - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Name:
Singleton-Merten syndrome 1 (SGMRT1)
Synonyms:
Widened medullary cavities of bone, aortic calcification, abnormal dentition, and muscular weakness; Syndrome of widened medullary cavities of the metacarpals and phalanges, aortic calcification and abnormal dentition
Identifiers:
MONDO: MONDO:0024535; MedGen: C4225427; Orphanet: 85191; OMIM: 182250
Name:
Aicardi-Goutieres syndrome 7 (AGS7)
Identifiers:
MONDO: MONDO:0014367; MedGen: C3888244; Orphanet: 51; OMIM: 615846
Name:
Immunodeficiency 95 (IMD95)
Identifiers:
MONDO: MONDO:0030692; MedGen: C5676929; OMIM: 619773

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002782498Fulgent Genetics, Fulgent Genetics
criteria provided, single submitter

(ACMG Guidelines, 2015)		Uncertain significance
(Aug 27, 2021) 		unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee.

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Fulgent Genetics, Fulgent Genetics, SCV002782498.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024