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NM_000090.4(COL3A1):c.665G>A (p.Gly222Asp) AND Familial thoracic aortic aneurysm and aortic dissection

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jul 24, 2018
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002362740.2

Allele description [Variation Report for NM_000090.4(COL3A1):c.665G>A (p.Gly222Asp)]

NM_000090.4(COL3A1):c.665G>A (p.Gly222Asp)

Gene:
COL3A1:collagen type III alpha 1 chain [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2q32.2
Genomic location:
Preferred name:
NM_000090.4(COL3A1):c.665G>A (p.Gly222Asp)
HGVS:
  • NC_000002.12:g.188989424G>A
  • NG_007404.1:g.20052G>A
  • NM_000090.4:c.665G>AMANE SELECT
  • NP_000081.1:p.Gly222Asp
  • NP_000081.2:p.Gly222Asp
  • LRG_3t1:c.665G>A
  • LRG_3:g.20052G>A
  • LRG_3p1:p.Gly222Asp
  • NC_000002.11:g.189854150G>A
  • NM_000090.3:c.665G>A
Links:
dbSNP: rs587779518
NCBI 1000 Genomes Browser:
rs587779518
Molecular consequence:
  • NM_000090.4:c.665G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Familial thoracic aortic aneurysm and aortic dissection (TAAD)
Synonyms:
Thoracic aortic aneurysm and aortic dissection; Thoracic aortic aneurysms and dissections
Identifiers:
MONDO: MONDO:0019625; MedGen: C4707243; Orphanet: 91387; OMIM: PS607086

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002661678Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)
Pathogenic
(Jul 24, 2018)
germlineclinical testing

PubMed (4)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Oral phenotype and scoring of vascular Ehlers-Danlos syndrome: a case-control study.

Ferré FC, Frank M, Gogly B, Golmard L, Naveau A, Chérifi H, Emmerich J, Gaultier F, Berdal A, Jeunemaitre X, Fournier BP.

BMJ Open. 2012 Apr 5;2(2):e000705. doi: 10.1136/bmjopen-2011-000705. Print 2012.

PubMed [citation]
PMID:
22492385
PMCID:
PMC3323826

Survival is affected by mutation type and molecular mechanism in vascular Ehlers-Danlos syndrome (EDS type IV).

Pepin MG, Schwarze U, Rice KM, Liu M, Leistritz D, Byers PH.

Genet Med. 2014 Dec;16(12):881-8. doi: 10.1038/gim.2014.72. Epub 2014 Jun 12.

PubMed [citation]
PMID:
24922459
See all PubMed Citations (4)

Details of each submission

From Ambry Genetics, SCV002661678.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (4)

Description

The p.G222D pathogenic mutation (also known as c.665G>A), located in coding exon 8 of the COL3A1 gene, results from a G to A substitution at nucleotide position 665. The glycine at codon 222 is replaced by aspartic acid, an amino acid with similar properties. The majority (approximately two-thirds) of COL3A1 mutations identified to date have involved the substitution of another amino acid for glycine within the triple-helical domain (Pepin MG et al. Genet Med. 2014;16(12):881-8; Frank M et al. Eur J Hum Genet. 2015;23(12):1657-64). This particular glycine substitution has been reported in several Ehlers-Danlos syndrome type IV (EDS, vascular type) cohorts (Ferré FC et al. BMJ Open. 2012;2:e000705; Pepin MG et al. Genet. Med. 2014;16:881-8). This mutation has been determined to be the result of a de novo mutation or germline mosaicism in one individual with EDS (Ambry internal data). Internal structural analysis has demonstrated that this alteration disrupts the characteristic G-X-Y motif in the COL3A1 protein and inserts a bulky side chain into a sterically-constrained region (Bella J et al. Science. 1994;266:75-81; Hohenester E et al. Proc. Natl. Acad. Sci. U.S.A. 2008;105:18273-7; Ambry internal data). A likely pathogenic alteration in the same codon, p.G222V, has also been described (Morissette R et al. Circ Cardiovasc Genet. 2014;7:80-8). Based on the supporting evidence, this alteration is interpreted as a disease-causing mutation.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 30, 2024