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GRCh37/hg19 8q21.11-21.3(chr8:77906471-88917707) AND not specified

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Mar 1, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002053776.3

Allele description [Variation Report for GRCh37/hg19 8q21.11-21.3(chr8:77906471-88917707)]

GRCh37/hg19 8q21.11-21.3(chr8:77906471-88917707)

Genes:
  • ATP6V0D2:ATPase H+ transporting V0 subunit d2 [Gene - OMIM - HGNC]
  • DCAF4L2:DDB1 and CUL4 associated factor 4 like 2 [Gene - HGNC]
  • E2F5:E2F transcription factor 5 [Gene - OMIM - HGNC]
  • RALYL:RALY RNA binding protein like [Gene - OMIM - HGNC]
  • WWP1:WW domain containing E3 ubiquitin protein ligase 1 [Gene - OMIM - HGNC]
  • PKIA:cAMP-dependent protein kinase inhibitor alpha [Gene - OMIM - HGNC]
  • CA13:carbonic anhydrase 13 [Gene - OMIM - HGNC]
  • CA1:carbonic anhydrase 1 [Gene - OMIM - HGNC]
  • CA2:carbonic anhydrase 2 [Gene - OMIM - HGNC]
  • CA3:carbonic anhydrase 3 [Gene - OMIM - HGNC]
  • CHMP4C:charged multivesicular body protein 4C [Gene - OMIM - HGNC]
  • CPNE3:copine 3 [Gene - OMIM - HGNC]
  • CNBD1:cyclic nucleotide binding domain containing 1 [Gene - HGNC]
  • CNGB3:cyclic nucleotide gated channel subunit beta 3 [Gene - OMIM - HGNC]
  • FABP12:fatty acid binding protein 12 [Gene - OMIM - HGNC]
  • FABP4:fatty acid binding protein 4 [Gene - OMIM - HGNC]
  • FABP5:fatty acid binding protein 5 [Gene - OMIM - HGNC]
  • FABP9:fatty acid binding protein 9 [Gene - HGNC]
  • HEY1:hes related family bHLH transcription factor with YRPW motif 1 [Gene - OMIM - HGNC]
  • IMPA1:inositol monophosphatase 1 [Gene - OMIM - HGNC]
  • IL7:interleukin 7 [Gene - OMIM - HGNC]
  • LRRCC1:leucine rich repeat and coiled-coil centrosomal protein 1 [Gene - OMIM - HGNC]
  • MRPS28:mitochondrial ribosomal protein S28 [Gene - OMIM - HGNC]
  • PMP2:peripheral myelin protein 2 [Gene - OMIM - HGNC]
  • PEX2:peroxisomal biogenesis factor 2 [Gene - OMIM - HGNC]
  • PAG1:phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Gene - OMIM - HGNC]
  • PSKH2:protein serine kinase H2 [Gene - HGNC]
  • RMDN1:regulator of microtubule dynamics 1 [Gene - OMIM - HGNC]
  • RBIS:ribosomal biogenesis factor [Gene - HGNC]
  • SLC10A5:solute carrier family 10 member 5 [Gene - OMIM - HGNC]
  • SLC7A13:solute carrier family 7 member 13 [Gene - OMIM - HGNC]
  • SNX16:sorting nexin 16 [Gene - OMIM - HGNC]
  • STMN2:stathmin 2 [Gene - OMIM - HGNC]
  • TPD52:tumor protein D52 [Gene - OMIM - HGNC]
  • ZFAND1:zinc finger AN1-type containing 1 [Gene - HGNC]
  • ZC2HC1A:zinc finger C2HC-type containing 1A [Gene - HGNC]
  • ZBTB10:zinc finger and BTB domain containing 10 [Gene - OMIM - HGNC]
  • ZNF704:zinc finger protein 704 [Gene - HGNC]
Variant type:
copy number loss
Cytogenetic location:
8q21.11-21.3
Genomic location:
Chr8: 77906471 - 88917707 (on Assembly GRCh37)
Preferred name:
GRCh37/hg19 8q21.11-21.3(chr8:77906471-88917707)
HGVS:
NC_000008.10:g.(?_77906471)_(88917707_?)del
Observations:
1

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002320572ARUP Laboratories, Cytogenetics and Genomic Microarray, ARUP Laboratories
criteria provided, single submitter

(ARUP Cytogenomic Constitutional CNV Assertion Criteria)
Pathogenic
(Mar 1, 2022)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot providednot providednot providedclinical testing

Details of each submission

From ARUP Laboratories, Cytogenetics and Genomic Microarray, ARUP Laboratories, SCV002320572.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided1not providednot providednot provided

Last Updated: Aug 15, 2022