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NM_152419.3(HGSNAT):c.715C>T (p.Arg239Cys) AND Mucopolysaccharidosis, MPS-III-C

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jun 1, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001835315.1

Allele description [Variation Report for NM_152419.3(HGSNAT):c.715C>T (p.Arg239Cys)]

NM_152419.3(HGSNAT):c.715C>T (p.Arg239Cys)

Gene:
HGSNAT:heparan-alpha-glucosaminide N-acetyltransferase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
8p11.21
Genomic location:
Preferred name:
NM_152419.3(HGSNAT):c.715C>T (p.Arg239Cys)
HGVS:
  • NC_000008.11:g.43170666C>T
  • NG_009552.1:g.35218C>T
  • NM_001363227.2:c.715C>T
  • NM_001363228.2:c.715C>T
  • NM_001363229.2:c.-119C>T
  • NM_152419.3:c.715C>TMANE SELECT
  • NP_001350156.1:p.Arg239Cys
  • NP_001350157.1:p.Arg239Cys
  • NP_689632.2:p.Arg239Cys
  • NC_000008.10:g.43025809C>T
  • NC_000008.10:g.43025809C>T
  • NM_152419.2:c.715C>T
Protein change:
R239C
Links:
dbSNP: rs369292480
NCBI 1000 Genomes Browser:
rs369292480
Molecular consequence:
  • NM_001363229.2:c.-119C>T - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_001363227.2:c.715C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001363228.2:c.715C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_152419.3:c.715C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Mucopolysaccharidosis, MPS-III-C (MPS3C)
Synonyms:
Mucopoly-saccharidosis type 3C; Sanfilippo syndrome C; Acetyl-CoA alpha-glucosaminide n-acetyltransferase deficiency; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0009657; MedGen: C0086649; Orphanet: 581; Orphanet: 79271; OMIM: 252930

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002083293Natera, Inc.
no assertion criteria provided
Uncertain significance
(Jun 1, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002083293.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024