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NM_025114.4(CEP290):c.7372A>G (p.Ser2458Gly) AND Leber congenital amaurosis

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Nov 4, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001829029.1

Allele description [Variation Report for NM_025114.4(CEP290):c.7372A>G (p.Ser2458Gly)]

NM_025114.4(CEP290):c.7372A>G (p.Ser2458Gly)

Genes:
RLIG1:RNA 5'-phosphate and 3'-OH ligase 1 [Gene - HGNC]
CEP290:centrosomal protein 290 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
12q21.32
Genomic location:
Preferred name:
NM_025114.4(CEP290):c.7372A>G (p.Ser2458Gly)
HGVS:
  • NC_000012.12:g.88049252T>C
  • NG_008417.2:g.97965A>G
  • NM_001009894.3:c.*830T>CMANE SELECT
  • NM_025114.4:c.7372A>GMANE SELECT
  • NP_079390.3:p.Ser2458Gly
  • LRG_694t1:c.7372A>G
  • LRG_694:g.97965A>G
  • LRG_694p1:p.Ser2458Gly
  • NC_000012.11:g.88443029T>C
  • NC_000012.11:g.88443029T>C
  • NM_025114.3:c.7372A>G
Protein change:
S2458G
Links:
dbSNP: rs762238709
NCBI 1000 Genomes Browser:
rs762238709
Molecular consequence:
  • NM_001009894.3:c.*830T>C - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_025114.4:c.7372A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Leber congenital amaurosis (LCA)
Synonyms:
Congenital retinal blindness; Leber's amaurosis
Identifiers:
MONDO: MONDO:0018998; MeSH: D057130; MedGen: C0339527; OMIM: PS204000

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002091805Natera, Inc.
no assertion criteria provided
Uncertain significance
(Nov 4, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002091805.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 24, 2024