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NM_001288705.3(CSF1R):c.704T>G (p.Val235Gly) AND not provided

Germline classification:
Uncertain significance (3 submissions)
Last evaluated:
Aug 1, 2023
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001795700.12

Allele description [Variation Report for NM_001288705.3(CSF1R):c.704T>G (p.Val235Gly)]

NM_001288705.3(CSF1R):c.704T>G (p.Val235Gly)

Genes:
LOC111188154:RORalpha allelically-responsive CSF1R enhancer [Gene]
CSF1R:colony stimulating factor 1 receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
5q32
Genomic location:
Preferred name:
NM_001288705.3(CSF1R):c.704T>G (p.Val235Gly)
HGVS:
  • NC_000005.10:g.150078137A>C
  • NG_012303.2:g.40236T>G
  • NG_055557.1:g.243A>C
  • NM_001288705.3:c.704T>GMANE SELECT
  • NM_001349736.2:c.704T>G
  • NM_001375320.1:c.704T>G
  • NM_001375321.1:c.260T>G
  • NM_005211.3:c.704T>G
  • NM_005211.4:c.704T>G
  • NP_001275634.1:p.Val235Gly
  • NP_001336665.1:p.Val235Gly
  • NP_001362249.1:p.Val235Gly
  • NP_001362250.1:p.Val87Gly
  • NP_005202.2:p.Val235Gly
  • NC_000005.9:g.149457700A>C
  • NR_109969.2:n.831T>G
  • NR_164679.1:n.760T>G
Protein change:
V235G
Links:
dbSNP: rs1465872803
NCBI 1000 Genomes Browser:
rs1465872803
Molecular consequence:
  • NM_001288705.3:c.704T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001349736.2:c.704T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001375320.1:c.704T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001375321.1:c.260T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_005211.4:c.704T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NR_109969.2:n.831T>G - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_164679.1:n.760T>G - non-coding transcript variant - [Sequence Ontology: SO:0001619]
Observations:
1

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002035894Laboratory of Diagnostic Genome Analysis, Leiden University Medical Center (LUMC) - VKGL Data-share Consensus

See additional submitters

no assertion criteria provided
Uncertain significancegermlineclinical testing

SCV002038000Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus

See additional submitters

no assertion criteria provided
Uncertain significancegermlineclinical testing

SCV004157330CeGaT Center for Human Genetics Tuebingen
criteria provided, single submitter

(CeGaT Center For Human Genetics Tuebingen Variant Classification Criteria Version 2)
Uncertain significance
(Aug 1, 2023)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Details of each submission

From Laboratory of Diagnostic Genome Analysis, Leiden University Medical Center (LUMC) - VKGL Data-share Consensus, SCV002035894.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus, SCV002038000.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From CeGaT Center for Human Genetics Tuebingen, SCV004157330.10

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided

Description

CSF1R: PM2, BP4

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Oct 20, 2024