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NM_001492.6(GDF1):c.608G>A (p.Trp203Ter) AND Heterotaxy

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Apr 24, 2021
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001732105.1

Allele description [Variation Report for NM_001492.6(GDF1):c.608G>A (p.Trp203Ter)]

NM_001492.6(GDF1):c.608G>A (p.Trp203Ter)

Genes:
CERS1:ceramide synthase 1 [Gene - OMIM - HGNC]
GDF1:growth differentiation factor 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.11
Genomic location:
Preferred name:
NM_001492.6(GDF1):c.608G>A (p.Trp203Ter)
HGVS:
  • NC_000019.10:g.18869108C>T
  • NG_012070.1:g.32037G>A
  • NG_033056.1:g.32037G>A
  • NM_001387438.1:c.608G>A
  • NM_001387440.1:c.*1469G>A
  • NM_001492.6:c.608G>AMANE SELECT
  • NM_021267.5:c.*877G>AMANE SELECT
  • NP_001374367.1:p.Trp203Ter
  • NP_001483.3:p.Trp203Ter
  • NC_000019.9:g.18979917C>T
  • NM_001492.4:c.608G>A
Protein change:
W203*
Links:
dbSNP: rs1359321518
NCBI 1000 Genomes Browser:
rs1359321518
Molecular consequence:
  • NM_001387440.1:c.*1469G>A - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_021267.5:c.*877G>A - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001387438.1:c.608G>A - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001492.6:c.608G>A - nonsense - [Sequence Ontology: SO:0001587]

Condition(s)

Name:
Heterotaxy
Synonyms:
Situs ambiguus; Laterality sequence
Identifiers:
MedGen: C0266642; Human Phenotype Ontology: HP:0030853

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001572804Pediatric Genetics Clinic, Sheba Medical Center
no assertion criteria provided
Pathogenic
(Apr 24, 2021)
inheritedresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedinheritedyes33not providednot providednot providedresearch

Details of each submission

From Pediatric Genetics Clinic, Sheba Medical Center, SCV001572804.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided3not providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot provided3not provided3not provided

Last Updated: Sep 29, 2024