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NM_000527.5(LDLR):c.1359-30C>T AND not specified

Germline classification:
Benign (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001726071.1

Allele description [Variation Report for NM_000527.5(LDLR):c.1359-30C>T]

NM_000527.5(LDLR):c.1359-30C>T

Genes:
LDLR:low density lipoprotein receptor [Gene - OMIM - HGNC]
MIR6886:microRNA 6886 [Gene - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.2
Genomic location:
Preferred name:
NM_000527.5(LDLR):c.1359-30C>T
HGVS:
  • NC_000019.10:g.11113505C>T
  • NG_009060.1:g.29125C>T
  • NM_000527.5:c.1359-30C>TMANE SELECT
  • NM_001195798.2:c.1359-30C>T
  • NM_001195799.2:c.1236-30C>T
  • NM_001195800.2:c.855-30C>T
  • NM_001195803.2:c.978-30C>T
  • LRG_274t1:c.1359-30C>T
  • LRG_274:g.29125C>T
  • NC_000019.9:g.11224181C>T
  • NM_000527.4:c.1359-30C>T
  • NR_106946.1:n.32C>T
  • c.1359-30C>T
Links:
LDLR-LOVD, British Heart Foundation: LDLR_001408;
Molecular consequence:
  • NM_000527.5:c.1359-30C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001195798.2:c.1359-30C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001195799.2:c.1236-30C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001195800.2:c.855-30C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001195803.2:c.978-30C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NR_106946.1:n.32C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001962999Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen - VKGL Data-share Consensus
no assertion criteria provided
Benigngermlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen - VKGL Data-share Consensus, SCV001962999.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024