U.S. flag

An official website of the United States government

NM_001282225.2(ADA2):c.139G>C (p.Gly47Arg) AND multiple conditions

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Apr 20, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001535952.3

Allele description [Variation Report for NM_001282225.2(ADA2):c.139G>C (p.Gly47Arg)]

NM_001282225.2(ADA2):c.139G>C (p.Gly47Arg)

Gene:
ADA2:adenosine deaminase 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
22q11.1
Genomic location:
Preferred name:
NM_001282225.2(ADA2):c.139G>C (p.Gly47Arg)
HGVS:
  • NC_000022.11:g.17209539C>G
  • NG_033943.1:g.17316G>C
  • NM_001282225.2:c.139G>CMANE SELECT
  • NM_001282226.2:c.139G>C
  • NM_001282227.2:c.13G>C
  • NM_001282228.2:c.13G>C
  • NM_001282229.2:c.-38-2249G>C
  • NP_001269154.1:p.Gly47Arg
  • NP_001269155.1:p.Gly47Arg
  • NP_001269156.1:p.Gly5Arg
  • NP_001269157.1:p.Gly5Arg
  • LRG_1217t1:c.139G>C
  • LRG_1217:g.17316G>C
  • LRG_1217p1:p.Gly47Arg
  • NC_000022.10:g.17690429C>G
  • NM_001282225.1:c.139G>C
Protein change:
G47R
Links:
dbSNP: rs202134424
NCBI 1000 Genomes Browser:
rs202134424
Molecular consequence:
  • NM_001282229.2:c.-38-2249G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001282225.2:c.139G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001282226.2:c.139G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001282227.2:c.13G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001282228.2:c.13G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Sneddon syndrome (SNDNS)
Synonyms:
Sneddon's syndrome; Livedo reticularis and cerebrovascular accidents; Cerebro-vascular lesions and livedo reticularis; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0008436; MedGen: C0282492; Orphanet: 820; OMIM: 182410
Name:
Vasculitis due to ADA2 deficiency (VAIHS)
Synonyms:
Polyarteritis nodosa, childhoood-onset; VASCULITIS, AUTOINFLAMMATION, IMMUNODEFICIENCY, AND HEMATOLOGIC DEFECTS SYNDROME
Identifiers:
MONDO: MONDO:0014306; MedGen: C3887654; Orphanet: 404553; OMIM: 615688

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV001752613Fulgent Genetics, Fulgent Genetics
criteria provided, single submitter

(ACMG Guidelines, 2015)		Pathogenic
(Apr 20, 2022) 		unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee.

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Fulgent Genetics, Fulgent Genetics, SCV001752613.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 24, 2024