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NM_021628.3(ALOXE3):c.1812T>A (p.Asn604Lys) AND Autosomal recessive congenital ichthyosis 3

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jan 7, 2021
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001289490.2

Allele description [Variation Report for NM_021628.3(ALOXE3):c.1812T>A (p.Asn604Lys)]

NM_021628.3(ALOXE3):c.1812T>A (p.Asn604Lys)

Gene:
ALOXE3:arachidonate lipoxygenase 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17p13.1
Genomic location:
Preferred name:
NM_021628.3(ALOXE3):c.1812T>A (p.Asn604Lys)
HGVS:
  • NC_000017.11:g.8103467A>T
  • NG_015807.1:g.20450T>A
  • NM_001165960.1:c.2208T>A
  • NM_001369446.1:c.1809T>A
  • NM_021628.3:c.1812T>AMANE SELECT
  • NP_001159432.1:p.Asn736Lys
  • NP_001356375.1:p.Asn603Lys
  • NP_067641.2:p.Asn604Lys
  • NC_000017.10:g.8006785A>T
  • NM_021628.2:c.1812T>A
Protein change:
N603K
Links:
dbSNP: rs568695601
NCBI 1000 Genomes Browser:
rs568695601
Molecular consequence:
  • NM_001165960.1:c.2208T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001369446.1:c.1809T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_021628.3:c.1812T>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Autosomal recessive congenital ichthyosis 3 (ARCI3)
Synonyms:
ICHTHYOSIS, LAMELLAR, 5
Identifiers:
MONDO: MONDO:0011680; MedGen: C3539888; OMIM: 606545

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001477360Institute for Human Genetics, University Medical Center Freiburg
no assertion criteria provided
Pathogenic
(Jan 7, 2021)
unknownclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Institute for Human Genetics, University Medical Center Freiburg, SCV001477360.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 24, 2022