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NM_015272.5(RPGRIP1L):c.1867G>C (p.Ala623Pro) AND Familial aplasia of the vermis

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jan 24, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001271329.1

Allele description [Variation Report for NM_015272.5(RPGRIP1L):c.1867G>C (p.Ala623Pro)]

NM_015272.5(RPGRIP1L):c.1867G>C (p.Ala623Pro)

Gene:
RPGRIP1L:RPGRIP1 like [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
16q12.2
Genomic location:
Preferred name:
NM_015272.5(RPGRIP1L):c.1867G>C (p.Ala623Pro)
HGVS:
  • NC_000016.10:g.53652820C>G
  • NG_008991.2:g.56040G>C
  • NM_001127897.4:c.1867G>C
  • NM_001308334.3:c.1867G>C
  • NM_001330538.2:c.1867G>C
  • NM_015272.5:c.1867G>CMANE SELECT
  • NP_001121369.1:p.Ala623Pro
  • NP_001295263.1:p.Ala623Pro
  • NP_001317467.1:p.Ala623Pro
  • NP_056087.2:p.Ala623Pro
  • LRG_696t1:c.1867G>C
  • LRG_696t2:c.1867G>C
  • LRG_696:g.56040G>C
  • LRG_696p1:p.Ala623Pro
  • LRG_696p2:p.Ala623Pro
  • NC_000016.9:g.53686732C>G
  • NC_000016.9:g.53686732C>G
  • NM_015272.2:c.1867G>C
  • NM_015272.4:c.1867G>C
Protein change:
A623P
Links:
dbSNP: rs776297522
NCBI 1000 Genomes Browser:
rs776297522
Molecular consequence:
  • NM_001127897.4:c.1867G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001308334.3:c.1867G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001330538.2:c.1867G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_015272.5:c.1867G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Familial aplasia of the vermis
Synonyms:
CEREBELLOPARENCHYMAL DISORDER IV; Joubert syndrome; Cerebelloparenchymal disorder 4; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0018772; MedGen: C0431399; Orphanet: 475; OMIM: PS213300

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV001452414Natera, Inc.
no assertion criteria provided
Uncertain significance
(Jan 24, 2020) 		germlineclinical testing

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV001452414.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 13, 2024