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NM_024339.5(THOC6):c.838del (p.Val280fs) AND Inborn genetic diseases

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Apr 25, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001267040.2

Allele description [Variation Report for NM_024339.5(THOC6):c.838del (p.Val280fs)]

NM_024339.5(THOC6):c.838del (p.Val280fs)

Gene:
THOC6:THO complex subunit 6 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
16p13.3
Genomic location:
Preferred name:
NM_024339.5(THOC6):c.838del (p.Val280fs)
HGVS:
  • NC_000016.10:g.3027393del
  • NG_052595.1:g.8375del
  • NM_001142350.3:c.810+113del
  • NM_001347703.2:c.766del
  • NM_001347704.2:c.838del
  • NM_024339.5:c.838delMANE SELECT
  • NP_001334632.1:p.Val256fs
  • NP_001334633.1:p.Val280fs
  • NP_077315.2:p.Val280fs
  • NC_000016.9:g.3077394del
  • NM_024339.3:c.838delG
Protein change:
V256fs
Links:
dbSNP: rs2072826485
NCBI 1000 Genomes Browser:
rs2072826485
Molecular consequence:
  • NM_001347703.2:c.766del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001347704.2:c.838del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_024339.5:c.838del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001142350.3:c.810+113del - intron variant - [Sequence Ontology: SO:0001627]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001445221Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Pathogenic
(Apr 25, 2019)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Kurdishgermlineyes1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV001445221.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Kurdish1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Jan 7, 2023