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GRCh37/hg19 2q32.3-33.1(chr2:197359024-201383462)x1 AND Chromosome 2q32-q33 deletion syndrome

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Nov 14, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001263250.2

Allele description [Variation Report for GRCh37/hg19 2q32.3-33.1(chr2:197359024-201383462)x1]

GRCh37/hg19 2q32.3-33.1(chr2:197359024-201383462)x1

Genes:
  • HECW2:HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 [Gene - OMIM - HGNC]
  • MOB4:MOB family member 4, phocein [Gene - OMIM - HGNC]
  • SATB2:SATB homeobox 2 [Gene - OMIM - HGNC]
  • ANKRD44:ankyrin repeat domain 44 [Gene - HGNC]
  • BOLL:boule homolog, RNA binding protein [Gene - OMIM - HGNC]
  • C2orf66:chromosome 2 open reading frame 66 [Gene - HGNC]
  • C2orf69:chromosome 2 open reading frame 69 [Gene - OMIM - HGNC]
  • COQ10B:coenzyme Q10B [Gene - OMIM - HGNC]
  • CCDC150:coiled-coil domain containing 150 [Gene - HGNC]
  • FTCDNL1:formiminotransferase cyclodeaminase N-terminal like [Gene - OMIM - HGNC]
  • GTF3C3:general transcription factor IIIC subunit 3 [Gene - OMIM - HGNC]
  • HSPD1:heat shock protein family D (Hsp60) member 1 [Gene - OMIM - HGNC]
  • HSPE1:heat shock protein family E (Hsp10) member 1 [Gene - OMIM - HGNC]
  • MAIP1:matrix AAA peptidase interacting protein 1 [Gene - OMIM - HGNC]
  • MARS2:methionyl-tRNA synthetase 2, mitochondrial [Gene - OMIM - HGNC]
  • PLCL1:phospholipase C like 1 (inactive) [Gene - OMIM - HGNC]
  • PGAP1:post-GPI attachment to proteins inositol deacylase 1 [Gene - OMIM - HGNC]
  • KCTD18:potassium channel tetramerization domain containing 18 [Gene - HGNC]
  • RFTN2:raftlin family member 2 [Gene - OMIM - HGNC]
  • SPATS2L:spermatogenesis associated serine rich 2 like [Gene - OMIM - HGNC]
  • SF3B1:splicing factor 3b subunit 1 [Gene - OMIM - HGNC]
  • TYW5:tRNA-yW synthesizing protein 5 [Gene - OMIM - HGNC]
Variant type:
copy number loss
Cytogenetic location:
2q32.3-33.1
Genomic location:
Chr2: 197359024 - 201383462 (on Assembly GRCh37)
Preferred name:
GRCh37/hg19 2q32.3-33.1(chr2:197359024-201383462)x1
HGVS:
NC_000002.11:g.(?_197359024)_(201383462_?)del

Condition(s)

Name:
Chromosome 2q32-q33 deletion syndrome (GLASS)
Synonyms:
Glass syndrome; 2q33.1 deletion syndrome
Identifiers:
MONDO: MONDO:0012864; MedGen: C2676739; Orphanet: 251019; OMIM: 612313

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001441285Coyote Medical Laboratory (Beijing), Coyote
no assertion criteria provided
Pathogenic
(Nov 14, 2019)
de novoclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedde novoyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Coyote Medical Laboratory (Beijing), Coyote, SCV001441285.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1de novoyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jun 23, 2024