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NM_000358.3(TGFBI):c.393G>T (p.Glu131Asp) AND Corneal dystrophy

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Apr 28, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001157795.4

Allele description [Variation Report for NM_000358.3(TGFBI):c.393G>T (p.Glu131Asp)]

NM_000358.3(TGFBI):c.393G>T (p.Glu131Asp)

Gene:
TGFBI:transforming growth factor beta induced [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
5q31.1
Genomic location:
Preferred name:
NM_000358.3(TGFBI):c.393G>T (p.Glu131Asp)
HGVS:
  • NC_000005.10:g.136046429G>T
  • NG_012646.1:g.22535G>T
  • NM_000358.3:c.393G>TMANE SELECT
  • NP_000349.1:p.Glu131Asp
  • NC_000005.9:g.135382118G>T
  • NM_000358.2:c.393G>T
Protein change:
E131D
Links:
dbSNP: rs199604416
NCBI 1000 Genomes Browser:
rs199604416
Molecular consequence:
  • NM_000358.3:c.393G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Corneal dystrophy
Identifiers:
MONDO: MONDO:0018102; MedGen: C0010036; Human Phenotype Ontology: HP:0001131

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001319397Illumina Laboratory Services, Illumina
criteria provided, single submitter

(ICSL Variant Classification Criteria 13 December 2019)
Uncertain significance
(Apr 28, 2017)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Identification of two novel mutations in the cornea-specific TGFBI gene causing unique phenotypes in patients with corneal dystrophies.

Foja S, Hoffmann K, Auw-Haedrich C, Reinhard T, Rupprecht A, Gruenauer-Kloevekorn C.

Int Ophthalmol. 2016 Dec;36(6):867-873. Epub 2016 Mar 10.

PubMed [citation]
PMID:
26961680

Details of each submission

From Illumina Laboratory Services, Illumina, SCV001319397.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)

Description

This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). Publications were found based on this search. However, the evidence from the literature, in combination with allele frequency data from public databases where available, was not sufficient to rule this variant in or out of causing disease. Therefore, this variant is classified as a variant of unknown significance.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 9, 2023