NM_007294.4(BRCA1):c.5479A>G (p.Met1827Val) AND Breast-ovarian cancer, familial, susceptibility to, 1
- Somatic classification
of clinical impact: - None
- Review status:
- (0/4) 0 stars out of maximum of 4 starsno assertion criteria provided
- Somatic classification
of oncogenicity: - None
- Review status:
- (0/4) 0 stars out of maximum of 4 starsno assertion criteria provided
- Record status:
- current
- Accession:
- RCV001072218.5
Allele description [Variation Report for NM_007294.4(BRCA1):c.5479A>G (p.Met1827Val)]
NM_007294.4(BRCA1):c.5479A>G (p.Met1827Val)
- Gene:
- BRCA1:BRCA1 DNA repair associated [Gene - OMIM - HGNC]
- Variant type:
- single nucleotide variant
- Cytogenetic location:
- 17q21.31
- Genomic location:
- Preferred name:
- NM_007294.4(BRCA1):c.5479A>G (p.Met1827Val)
- HGVS:
- NC_000017.11:g.43045791T>C
- NG_005905.2:g.172193A>G
- NM_001407571.1:c.5266A>G
- NM_001407581.1:c.5545A>G
- NM_001407582.1:c.5545A>G
- NM_001407583.1:c.5542A>G
- NM_001407585.1:c.5542A>G
- NM_001407587.1:c.5542A>G
- NM_001407590.1:c.5539A>G
- NM_001407591.1:c.5539A>G
- NM_001407593.1:c.5479A>G
- NM_001407594.1:c.5479A>G
- NM_001407596.1:c.5479A>G
- NM_001407597.1:c.5479A>G
- NM_001407598.1:c.5479A>G
- NM_001407602.1:c.5479A>G
- NM_001407603.1:c.5479A>G
- NM_001407605.1:c.5479A>G
- NM_001407610.1:c.5476A>G
- NM_001407611.1:c.5476A>G
- NM_001407612.1:c.5476A>G
- NM_001407613.1:c.5476A>G
- NM_001407614.1:c.5476A>G
- NM_001407615.1:c.5476A>G
- NM_001407616.1:c.5476A>G
- NM_001407617.1:c.5476A>G
- NM_001407618.1:c.5476A>G
- NM_001407619.1:c.5476A>G
- NM_001407620.1:c.5476A>G
- NM_001407621.1:c.5476A>G
- NM_001407622.1:c.5476A>G
- NM_001407623.1:c.5476A>G
- NM_001407624.1:c.5476A>G
- NM_001407625.1:c.5476A>G
- NM_001407626.1:c.5476A>G
- NM_001407627.1:c.5473A>G
- NM_001407628.1:c.5473A>G
- NM_001407629.1:c.5473A>G
- NM_001407630.1:c.5473A>G
- NM_001407631.1:c.5473A>G
- NM_001407632.1:c.5473A>G
- NM_001407633.1:c.5473A>G
- NM_001407634.1:c.5473A>G
- NM_001407635.1:c.5473A>G
- NM_001407636.1:c.5473A>G
- NM_001407637.1:c.5473A>G
- NM_001407638.1:c.5473A>G
- NM_001407639.1:c.5473A>G
- NM_001407640.1:c.5473A>G
- NM_001407641.1:c.5473A>G
- NM_001407642.1:c.5473A>G
- NM_001407644.1:c.5470A>G
- NM_001407645.1:c.5470A>G
- NM_001407646.1:c.5467A>G
- NM_001407647.1:c.5464A>G
- NM_001407648.1:c.5422A>G
- NM_001407649.1:c.5419A>G
- NM_001407652.1:c.5401A>G
- NM_001407653.1:c.5401A>G
- NM_001407654.1:c.5401A>G
- NM_001407655.1:c.5401A>G
- NM_001407656.1:c.5398A>G
- NM_001407657.1:c.5398A>G
- NM_001407658.1:c.5398A>G
- NM_001407659.1:c.5395A>G
- NM_001407660.1:c.5395A>G
- NM_001407661.1:c.5395A>G
- NM_001407662.1:c.5395A>G
- NM_001407663.1:c.5395A>G
- NM_001407664.1:c.5356A>G
- NM_001407665.1:c.5356A>G
- NM_001407666.1:c.5356A>G
- NM_001407667.1:c.5356A>G
- NM_001407668.1:c.5356A>G
- NM_001407669.1:c.5356A>G
- NM_001407670.1:c.5353A>G
- NM_001407671.1:c.5353A>G
- NM_001407672.1:c.5353A>G
- NM_001407673.1:c.5353A>G
- NM_001407674.1:c.5353A>G
- NM_001407675.1:c.5353A>G
- NM_001407676.1:c.5353A>G
- NM_001407677.1:c.5353A>G
- NM_001407678.1:c.5353A>G
- NM_001407679.1:c.5353A>G
- NM_001407680.1:c.5353A>G
- NM_001407681.1:c.5350A>G
- NM_001407682.1:c.5350A>G
- NM_001407683.1:c.5350A>G
- NM_001407684.1:c.5350A>G
- NM_001407685.1:c.5350A>G
- NM_001407686.1:c.5350A>G
- NM_001407687.1:c.5350A>G
- NM_001407688.1:c.5350A>G
- NM_001407689.1:c.5350A>G
- NM_001407690.1:c.5347A>G
- NM_001407691.1:c.5347A>G
- NM_001407692.1:c.5338A>G
- NM_001407694.1:c.5338A>G
- NM_001407695.1:c.5338A>G
- NM_001407696.1:c.5338A>G
- NM_001407697.1:c.5338A>G
- NM_001407698.1:c.5338A>G
- NM_001407724.1:c.5338A>G
- NM_001407725.1:c.5338A>G
- NM_001407726.1:c.5338A>G
- NM_001407727.1:c.5338A>G
- NM_001407728.1:c.5338A>G
- NM_001407729.1:c.5338A>G
- NM_001407730.1:c.5338A>G
- NM_001407731.1:c.5338A>G
- NM_001407732.1:c.5335A>G
- NM_001407733.1:c.5335A>G
- NM_001407734.1:c.5335A>G
- NM_001407735.1:c.5335A>G
- NM_001407736.1:c.5335A>G
- NM_001407737.1:c.5335A>G
- NM_001407738.1:c.5335A>G
- NM_001407739.1:c.5335A>G
- NM_001407740.1:c.5335A>G
- NM_001407741.1:c.5335A>G
- NM_001407742.1:c.5335A>G
- NM_001407743.1:c.5335A>G
- NM_001407744.1:c.5335A>G
- NM_001407745.1:c.5335A>G
- NM_001407746.1:c.5335A>G
- NM_001407747.1:c.5335A>G
- NM_001407748.1:c.5335A>G
- NM_001407749.1:c.5335A>G
- NM_001407750.1:c.5335A>G
- NM_001407751.1:c.5335A>G
- NM_001407752.1:c.5335A>G
- NM_001407838.1:c.5332A>G
- NM_001407839.1:c.5332A>G
- NM_001407841.1:c.5332A>G
- NM_001407842.1:c.5332A>G
- NM_001407843.1:c.5332A>G
- NM_001407844.1:c.5332A>G
- NM_001407845.1:c.5332A>G
- NM_001407846.1:c.5332A>G
- NM_001407847.1:c.5332A>G
- NM_001407848.1:c.5332A>G
- NM_001407849.1:c.5332A>G
- NM_001407850.1:c.5332A>G
- NM_001407851.1:c.5332A>G
- NM_001407852.1:c.5332A>G
- NM_001407853.1:c.5332A>G
- NM_001407854.1:c.5405A>G
- NM_001407858.1:c.5402A>G
- NM_001407859.1:c.5402A>G
- NM_001407860.1:c.5402A>G
- NM_001407861.1:c.5399A>G
- NM_001407862.1:c.5278A>G
- NM_001407863.1:c.5275A>G
- NM_001407874.1:c.5272A>G
- NM_001407875.1:c.5272A>G
- NM_001407879.1:c.5269A>G
- NM_001407881.1:c.5269A>G
- NM_001407882.1:c.5269A>G
- NM_001407884.1:c.5269A>G
- NM_001407885.1:c.5269A>G
- NM_001407886.1:c.5269A>G
- NM_001407887.1:c.5269A>G
- NM_001407889.1:c.5269A>G
- NM_001407894.1:c.5266A>G
- NM_001407895.1:c.5266A>G
- NM_001407896.1:c.5266A>G
- NM_001407897.1:c.5266A>G
- NM_001407898.1:c.5266A>G
- NM_001407899.1:c.5266A>G
- NM_001407900.1:c.5266A>G
- NM_001407902.1:c.5266A>G
- NM_001407904.1:c.5266A>G
- NM_001407906.1:c.5266A>G
- NM_001407907.1:c.5266A>G
- NM_001407908.1:c.5266A>G
- NM_001407909.1:c.5266A>G
- NM_001407910.1:c.5266A>G
- NM_001407915.1:c.5263A>G
- NM_001407916.1:c.5263A>G
- NM_001407917.1:c.5263A>G
- NM_001407918.1:c.5263A>G
- NM_001407919.1:c.5227A>G
- NM_001407920.1:c.5215A>G
- NM_001407921.1:c.5215A>G
- NM_001407922.1:c.5215A>G
- NM_001407923.1:c.5215A>G
- NM_001407924.1:c.5215A>G
- NM_001407925.1:c.5215A>G
- NM_001407926.1:c.5215A>G
- NM_001407927.1:c.5212A>G
- NM_001407928.1:c.5212A>G
- NM_001407929.1:c.5212A>G
- NM_001407930.1:c.5212A>G
- NM_001407931.1:c.5212A>G
- NM_001407932.1:c.5212A>G
- NM_001407933.1:c.5212A>G
- NM_001407934.1:c.5209A>G
- NM_001407935.1:c.5209A>G
- NM_001407936.1:c.5209A>G
- NM_001407937.1:c.5282A>G
- NM_001407938.1:c.5282A>G
- NM_001407939.1:c.5279A>G
- NM_001407940.1:c.5279A>G
- NM_001407941.1:c.5276A>G
- NM_001407942.1:c.5264A>G
- NM_001407943.1:c.5261A>G
- NM_001407944.1:c.5261A>G
- NM_001407945.1:c.5261A>G
- NM_001407946.1:c.5146A>G
- NM_001407947.1:c.5146A>G
- NM_001407948.1:c.5146A>G
- NM_001407949.1:c.5146A>G
- NM_001407950.1:c.5143A>G
- NM_001407951.1:c.5143A>G
- NM_001407952.1:c.5143A>G
- NM_001407953.1:c.5143A>G
- NM_001407954.1:c.5143A>G
- NM_001407955.1:c.5143A>G
- NM_001407956.1:c.5140A>G
- NM_001407957.1:c.5140A>G
- NM_001407958.1:c.5140A>G
- NM_001407959.1:c.5098A>G
- NM_001407960.1:c.5095A>G
- NM_001407962.1:c.5095A>G
- NM_001407963.1:c.5092A>G
- NM_001407964.1:c.5017A>G
- NM_001407965.1:c.4972A>G
- NM_001407966.1:c.4591A>G
- NM_001407967.1:c.4588A>G
- NM_001407968.1:c.2875A>G
- NM_001407969.1:c.2872A>G
- NM_001407970.1:c.2236A>G
- NM_001407971.1:c.2236A>G
- NM_001407972.1:c.2233A>G
- NM_001407973.1:c.2170A>G
- NM_001407974.1:c.2170A>G
- NM_001407975.1:c.2170A>G
- NM_001407976.1:c.2170A>G
- NM_001407977.1:c.2170A>G
- NM_001407978.1:c.2170A>G
- NM_001407979.1:c.2167A>G
- NM_001407980.1:c.2167A>G
- NM_001407981.1:c.2167A>G
- NM_001407982.1:c.2167A>G
- NM_001407983.1:c.2167A>G
- NM_001407984.1:c.2167A>G
- NM_001407985.1:c.2167A>G
- NM_001407986.1:c.2167A>G
- NM_001407990.1:c.2167A>G
- NM_001407991.1:c.2167A>G
- NM_001407992.1:c.2167A>G
- NM_001407993.1:c.2167A>G
- NM_001408392.1:c.2164A>G
- NM_001408396.1:c.2164A>G
- NM_001408397.1:c.2164A>G
- NM_001408398.1:c.2164A>G
- NM_001408399.1:c.2164A>G
- NM_001408400.1:c.2164A>G
- NM_001408401.1:c.2164A>G
- NM_001408402.1:c.2164A>G
- NM_001408403.1:c.2164A>G
- NM_001408404.1:c.2164A>G
- NM_001408406.1:c.2161A>G
- NM_001408407.1:c.2161A>G
- NM_001408408.1:c.2161A>G
- NM_001408409.1:c.2158A>G
- NM_001408410.1:c.2095A>G
- NM_001408411.1:c.2092A>G
- NM_001408412.1:c.2089A>G
- NM_001408413.1:c.2089A>G
- NM_001408414.1:c.2089A>G
- NM_001408415.1:c.2089A>G
- NM_001408416.1:c.2089A>G
- NM_001408418.1:c.2053A>G
- NM_001408419.1:c.2053A>G
- NM_001408420.1:c.2053A>G
- NM_001408421.1:c.2050A>G
- NM_001408422.1:c.2050A>G
- NM_001408423.1:c.2050A>G
- NM_001408424.1:c.2050A>G
- NM_001408425.1:c.2047A>G
- NM_001408426.1:c.2047A>G
- NM_001408427.1:c.2047A>G
- NM_001408428.1:c.2047A>G
- NM_001408429.1:c.2047A>G
- NM_001408430.1:c.2047A>G
- NM_001408431.1:c.2047A>G
- NM_001408432.1:c.2044A>G
- NM_001408433.1:c.2044A>G
- NM_001408434.1:c.2044A>G
- NM_001408435.1:c.2044A>G
- NM_001408436.1:c.2044A>G
- NM_001408437.1:c.2044A>G
- NM_001408438.1:c.2044A>G
- NM_001408439.1:c.2044A>G
- NM_001408440.1:c.2044A>G
- NM_001408441.1:c.2044A>G
- NM_001408442.1:c.2044A>G
- NM_001408443.1:c.2044A>G
- NM_001408444.1:c.2044A>G
- NM_001408445.1:c.2041A>G
- NM_001408446.1:c.2041A>G
- NM_001408447.1:c.2041A>G
- NM_001408448.1:c.2041A>G
- NM_001408450.1:c.2041A>G
- NM_001408451.1:c.2035A>G
- NM_001408452.1:c.2029A>G
- NM_001408453.1:c.2029A>G
- NM_001408454.1:c.2029A>G
- NM_001408455.1:c.2029A>G
- NM_001408456.1:c.2029A>G
- NM_001408457.1:c.2029A>G
- NM_001408458.1:c.2026A>G
- NM_001408459.1:c.2026A>G
- NM_001408460.1:c.2026A>G
- NM_001408461.1:c.2026A>G
- NM_001408462.1:c.2026A>G
- NM_001408463.1:c.2026A>G
- NM_001408464.1:c.2026A>G
- NM_001408465.1:c.2026A>G
- NM_001408466.1:c.2026A>G
- NM_001408467.1:c.2026A>G
- NM_001408468.1:c.2023A>G
- NM_001408469.1:c.2023A>G
- NM_001408470.1:c.2023A>G
- NM_001408472.1:c.2093A>G
- NM_001408473.1:c.2090A>G
- NM_001408474.1:c.1969A>G
- NM_001408475.1:c.1966A>G
- NM_001408476.1:c.1966A>G
- NM_001408478.1:c.1960A>G
- NM_001408479.1:c.1960A>G
- NM_001408480.1:c.1960A>G
- NM_001408481.1:c.1957A>G
- NM_001408482.1:c.1957A>G
- NM_001408483.1:c.1957A>G
- NM_001408484.1:c.1957A>G
- NM_001408485.1:c.1957A>G
- NM_001408489.1:c.1957A>G
- NM_001408490.1:c.1957A>G
- NM_001408491.1:c.1957A>G
- NM_001408492.1:c.1954A>G
- NM_001408493.1:c.1954A>G
- NM_001408494.1:c.1930A>G
- NM_001408495.1:c.1924A>G
- NM_001408496.1:c.1906A>G
- NM_001408497.1:c.1906A>G
- NM_001408498.1:c.1906A>G
- NM_001408499.1:c.1906A>G
- NM_001408500.1:c.1906A>G
- NM_001408501.1:c.1906A>G
- NM_001408502.1:c.1903A>G
- NM_001408503.1:c.1903A>G
- NM_001408504.1:c.1903A>G
- NM_001408505.1:c.1900A>G
- NM_001408506.1:c.1843A>G
- NM_001408507.1:c.1840A>G
- NM_001408508.1:c.1831A>G
- NM_001408509.1:c.1828A>G
- NM_001408510.1:c.1789A>G
- NM_001408511.1:c.1786A>G
- NM_001408512.1:c.1666A>G
- NM_001408513.1:c.1639A>G
- NM_001408514.1:c.1243A>G
- NM_007294.4:c.5479A>GMANE SELECT
- NM_007297.4:c.5338A>G
- NM_007298.4:c.2167A>G
- NM_007299.4:c.2093A>G
- NM_007300.4:c.5542A>G
- NM_007304.2:c.2167A>G
- NP_001394500.1:p.Met1756Val
- NP_001394510.1:p.Met1849Val
- NP_001394511.1:p.Met1849Val
- NP_001394512.1:p.Met1848Val
- NP_001394514.1:p.Met1848Val
- NP_001394516.1:p.Met1848Val
- NP_001394519.1:p.Met1847Val
- NP_001394520.1:p.Met1847Val
- NP_001394522.1:p.Met1827Val
- NP_001394523.1:p.Met1827Val
- NP_001394525.1:p.Met1827Val
- NP_001394526.1:p.Met1827Val
- NP_001394527.1:p.Met1827Val
- NP_001394531.1:p.Met1827Val
- NP_001394532.1:p.Met1827Val
- NP_001394534.1:p.Met1827Val
- NP_001394539.1:p.Met1826Val
- NP_001394540.1:p.Met1826Val
- NP_001394541.1:p.Met1826Val
- NP_001394542.1:p.Met1826Val
- NP_001394543.1:p.Met1826Val
- NP_001394544.1:p.Met1826Val
- NP_001394545.1:p.Met1826Val
- NP_001394546.1:p.Met1826Val
- NP_001394547.1:p.Met1826Val
- NP_001394548.1:p.Met1826Val
- NP_001394549.1:p.Met1826Val
- NP_001394550.1:p.Met1826Val
- NP_001394551.1:p.Met1826Val
- NP_001394552.1:p.Met1826Val
- NP_001394553.1:p.Met1826Val
- NP_001394554.1:p.Met1826Val
- NP_001394555.1:p.Met1826Val
- NP_001394556.1:p.Met1825Val
- NP_001394557.1:p.Met1825Val
- NP_001394558.1:p.Met1825Val
- NP_001394559.1:p.Met1825Val
- NP_001394560.1:p.Met1825Val
- NP_001394561.1:p.Met1825Val
- NP_001394562.1:p.Met1825Val
- NP_001394563.1:p.Met1825Val
- NP_001394564.1:p.Met1825Val
- NP_001394565.1:p.Met1825Val
- NP_001394566.1:p.Met1825Val
- NP_001394567.1:p.Met1825Val
- NP_001394568.1:p.Met1825Val
- NP_001394569.1:p.Met1825Val
- NP_001394570.1:p.Met1825Val
- NP_001394571.1:p.Met1825Val
- NP_001394573.1:p.Met1824Val
- NP_001394574.1:p.Met1824Val
- NP_001394575.1:p.Met1823Val
- NP_001394576.1:p.Met1822Val
- NP_001394577.1:p.Met1808Val
- NP_001394578.1:p.Met1807Val
- NP_001394581.1:p.Met1801Val
- NP_001394582.1:p.Met1801Val
- NP_001394583.1:p.Met1801Val
- NP_001394584.1:p.Met1801Val
- NP_001394585.1:p.Met1800Val
- NP_001394586.1:p.Met1800Val
- NP_001394587.1:p.Met1800Val
- NP_001394588.1:p.Met1799Val
- NP_001394589.1:p.Met1799Val
- NP_001394590.1:p.Met1799Val
- NP_001394591.1:p.Met1799Val
- NP_001394592.1:p.Met1799Val
- NP_001394593.1:p.Met1786Val
- NP_001394594.1:p.Met1786Val
- NP_001394595.1:p.Met1786Val
- NP_001394596.1:p.Met1786Val
- NP_001394597.1:p.Met1786Val
- NP_001394598.1:p.Met1786Val
- NP_001394599.1:p.Met1785Val
- NP_001394600.1:p.Met1785Val
- NP_001394601.1:p.Met1785Val
- NP_001394602.1:p.Met1785Val
- NP_001394603.1:p.Met1785Val
- NP_001394604.1:p.Met1785Val
- NP_001394605.1:p.Met1785Val
- NP_001394606.1:p.Met1785Val
- NP_001394607.1:p.Met1785Val
- NP_001394608.1:p.Met1785Val
- NP_001394609.1:p.Met1785Val
- NP_001394610.1:p.Met1784Val
- NP_001394611.1:p.Met1784Val
- NP_001394612.1:p.Met1784Val
- NP_001394613.1:p.Met1784Val
- NP_001394614.1:p.Met1784Val
- NP_001394615.1:p.Met1784Val
- NP_001394616.1:p.Met1784Val
- NP_001394617.1:p.Met1784Val
- NP_001394618.1:p.Met1784Val
- NP_001394619.1:p.Met1783Val
- NP_001394620.1:p.Met1783Val
- NP_001394621.1:p.Met1780Val
- NP_001394623.1:p.Met1780Val
- NP_001394624.1:p.Met1780Val
- NP_001394625.1:p.Met1780Val
- NP_001394626.1:p.Met1780Val
- NP_001394627.1:p.Met1780Val
- NP_001394653.1:p.Met1780Val
- NP_001394654.1:p.Met1780Val
- NP_001394655.1:p.Met1780Val
- NP_001394656.1:p.Met1780Val
- NP_001394657.1:p.Met1780Val
- NP_001394658.1:p.Met1780Val
- NP_001394659.1:p.Met1780Val
- NP_001394660.1:p.Met1780Val
- NP_001394661.1:p.Met1779Val
- NP_001394662.1:p.Met1779Val
- NP_001394663.1:p.Met1779Val
- NP_001394664.1:p.Met1779Val
- NP_001394665.1:p.Met1779Val
- NP_001394666.1:p.Met1779Val
- NP_001394667.1:p.Met1779Val
- NP_001394668.1:p.Met1779Val
- NP_001394669.1:p.Met1779Val
- NP_001394670.1:p.Met1779Val
- NP_001394671.1:p.Met1779Val
- NP_001394672.1:p.Met1779Val
- NP_001394673.1:p.Met1779Val
- NP_001394674.1:p.Met1779Val
- NP_001394675.1:p.Met1779Val
- NP_001394676.1:p.Met1779Val
- NP_001394677.1:p.Met1779Val
- NP_001394678.1:p.Met1779Val
- NP_001394679.1:p.Met1779Val
- NP_001394680.1:p.Met1779Val
- NP_001394681.1:p.Met1779Val
- NP_001394767.1:p.Met1778Val
- NP_001394768.1:p.Met1778Val
- NP_001394770.1:p.Met1778Val
- NP_001394771.1:p.Met1778Val
- NP_001394772.1:p.Met1778Val
- NP_001394773.1:p.Met1778Val
- NP_001394774.1:p.Met1778Val
- NP_001394775.1:p.Met1778Val
- NP_001394776.1:p.Met1778Val
- NP_001394777.1:p.Met1778Val
- NP_001394778.1:p.Met1778Val
- NP_001394779.1:p.Met1778Val
- NP_001394780.1:p.Met1778Val
- NP_001394781.1:p.Met1778Val
- NP_001394782.1:p.Met1778Val
- NP_001394783.1:p.Asp1802Gly
- NP_001394787.1:p.Asp1801Gly
- NP_001394788.1:p.Asp1801Gly
- NP_001394789.1:p.Asp1801Gly
- NP_001394790.1:p.Asp1800Gly
- NP_001394791.1:p.Met1760Val
- NP_001394792.1:p.Met1759Val
- NP_001394803.1:p.Met1758Val
- NP_001394804.1:p.Met1758Val
- NP_001394808.1:p.Met1757Val
- NP_001394810.1:p.Met1757Val
- NP_001394811.1:p.Met1757Val
- NP_001394813.1:p.Met1757Val
- NP_001394814.1:p.Met1757Val
- NP_001394815.1:p.Met1757Val
- NP_001394816.1:p.Met1757Val
- NP_001394818.1:p.Met1757Val
- NP_001394823.1:p.Met1756Val
- NP_001394824.1:p.Met1756Val
- NP_001394825.1:p.Met1756Val
- NP_001394826.1:p.Met1756Val
- NP_001394827.1:p.Met1756Val
- NP_001394828.1:p.Met1756Val
- NP_001394829.1:p.Met1756Val
- NP_001394831.1:p.Met1756Val
- NP_001394833.1:p.Met1756Val
- NP_001394835.1:p.Met1756Val
- NP_001394836.1:p.Met1756Val
- NP_001394837.1:p.Met1756Val
- NP_001394838.1:p.Met1756Val
- NP_001394839.1:p.Met1756Val
- NP_001394844.1:p.Met1755Val
- NP_001394845.1:p.Met1755Val
- NP_001394846.1:p.Met1755Val
- NP_001394847.1:p.Met1755Val
- NP_001394848.1:p.Met1743Val
- NP_001394849.1:p.Met1739Val
- NP_001394850.1:p.Met1739Val
- NP_001394851.1:p.Met1739Val
- NP_001394852.1:p.Met1739Val
- NP_001394853.1:p.Met1739Val
- NP_001394854.1:p.Met1739Val
- NP_001394855.1:p.Met1739Val
- NP_001394856.1:p.Met1738Val
- NP_001394857.1:p.Met1738Val
- NP_001394858.1:p.Met1738Val
- NP_001394859.1:p.Met1738Val
- NP_001394860.1:p.Met1738Val
- NP_001394861.1:p.Met1738Val
- NP_001394862.1:p.Met1738Val
- NP_001394863.1:p.Met1737Val
- NP_001394864.1:p.Met1737Val
- NP_001394865.1:p.Met1737Val
- NP_001394866.1:p.Asp1761Gly
- NP_001394867.1:p.Asp1761Gly
- NP_001394868.1:p.Asp1760Gly
- NP_001394869.1:p.Asp1760Gly
- NP_001394870.1:p.Asp1759Gly
- NP_001394871.1:p.Asp1755Gly
- NP_001394872.1:p.Asp1754Gly
- NP_001394873.1:p.Asp1754Gly
- NP_001394874.1:p.Asp1754Gly
- NP_001394875.1:p.Met1716Val
- NP_001394876.1:p.Met1716Val
- NP_001394877.1:p.Met1716Val
- NP_001394878.1:p.Met1716Val
- NP_001394879.1:p.Met1715Val
- NP_001394880.1:p.Met1715Val
- NP_001394881.1:p.Met1715Val
- NP_001394882.1:p.Met1715Val
- NP_001394883.1:p.Met1715Val
- NP_001394884.1:p.Met1715Val
- NP_001394885.1:p.Met1714Val
- NP_001394886.1:p.Met1714Val
- NP_001394887.1:p.Met1714Val
- NP_001394888.1:p.Met1700Val
- NP_001394889.1:p.Met1699Val
- NP_001394891.1:p.Met1699Val
- NP_001394892.1:p.Met1698Val
- NP_001394893.1:p.Met1673Val
- NP_001394894.1:p.Met1658Val
- NP_001394895.1:p.Met1531Val
- NP_001394896.1:p.Met1530Val
- NP_001394897.1:p.Met959Val
- NP_001394898.1:p.Met958Val
- NP_001394899.1:p.Met746Val
- NP_001394900.1:p.Met746Val
- NP_001394901.1:p.Met745Val
- NP_001394902.1:p.Met724Val
- NP_001394903.1:p.Met724Val
- NP_001394904.1:p.Met724Val
- NP_001394905.1:p.Met724Val
- NP_001394906.1:p.Met724Val
- NP_001394907.1:p.Met724Val
- NP_001394908.1:p.Met723Val
- NP_001394909.1:p.Met723Val
- NP_001394910.1:p.Met723Val
- NP_001394911.1:p.Met723Val
- NP_001394912.1:p.Met723Val
- NP_001394913.1:p.Met723Val
- NP_001394914.1:p.Met723Val
- NP_001394915.1:p.Met723Val
- NP_001394919.1:p.Met723Val
- NP_001394920.1:p.Met723Val
- NP_001394921.1:p.Met723Val
- NP_001394922.1:p.Met723Val
- NP_001395321.1:p.Met722Val
- NP_001395325.1:p.Met722Val
- NP_001395326.1:p.Met722Val
- NP_001395327.1:p.Met722Val
- NP_001395328.1:p.Met722Val
- NP_001395329.1:p.Met722Val
- NP_001395330.1:p.Met722Val
- NP_001395331.1:p.Met722Val
- NP_001395332.1:p.Met722Val
- NP_001395333.1:p.Met722Val
- NP_001395335.1:p.Met721Val
- NP_001395336.1:p.Met721Val
- NP_001395337.1:p.Met721Val
- NP_001395338.1:p.Met720Val
- NP_001395339.1:p.Met699Val
- NP_001395340.1:p.Met698Val
- NP_001395341.1:p.Met697Val
- NP_001395342.1:p.Met697Val
- NP_001395343.1:p.Met697Val
- NP_001395344.1:p.Met697Val
- NP_001395345.1:p.Met697Val
- NP_001395347.1:p.Met685Val
- NP_001395348.1:p.Met685Val
- NP_001395349.1:p.Met685Val
- NP_001395350.1:p.Met684Val
- NP_001395351.1:p.Met684Val
- NP_001395352.1:p.Met684Val
- NP_001395353.1:p.Met684Val
- NP_001395354.1:p.Met683Val
- NP_001395355.1:p.Met683Val
- NP_001395356.1:p.Met683Val
- NP_001395357.1:p.Met683Val
- NP_001395358.1:p.Met683Val
- NP_001395359.1:p.Met683Val
- NP_001395360.1:p.Met683Val
- NP_001395361.1:p.Met682Val
- NP_001395362.1:p.Met682Val
- NP_001395363.1:p.Met682Val
- NP_001395364.1:p.Met682Val
- NP_001395365.1:p.Met682Val
- NP_001395366.1:p.Met682Val
- NP_001395367.1:p.Met682Val
- NP_001395368.1:p.Met682Val
- NP_001395369.1:p.Met682Val
- NP_001395370.1:p.Met682Val
- NP_001395371.1:p.Met682Val
- NP_001395372.1:p.Met682Val
- NP_001395373.1:p.Met682Val
- NP_001395374.1:p.Met681Val
- NP_001395375.1:p.Met681Val
- NP_001395376.1:p.Met681Val
- NP_001395377.1:p.Met681Val
- NP_001395379.1:p.Met681Val
- NP_001395380.1:p.Met679Val
- NP_001395381.1:p.Met677Val
- NP_001395382.1:p.Met677Val
- NP_001395383.1:p.Met677Val
- NP_001395384.1:p.Met677Val
- NP_001395385.1:p.Met677Val
- NP_001395386.1:p.Met677Val
- NP_001395387.1:p.Met676Val
- NP_001395388.1:p.Met676Val
- NP_001395389.1:p.Met676Val
- NP_001395390.1:p.Met676Val
- NP_001395391.1:p.Met676Val
- NP_001395392.1:p.Met676Val
- NP_001395393.1:p.Met676Val
- NP_001395394.1:p.Met676Val
- NP_001395395.1:p.Met676Val
- NP_001395396.1:p.Met676Val
- NP_001395397.1:p.Met675Val
- NP_001395398.1:p.Met675Val
- NP_001395399.1:p.Met675Val
- NP_001395401.1:p.Asp698Gly
- NP_001395402.1:p.Asp697Gly
- NP_001395403.1:p.Met657Val
- NP_001395404.1:p.Met656Val
- NP_001395405.1:p.Met656Val
- NP_001395407.1:p.Met654Val
- NP_001395408.1:p.Met654Val
- NP_001395409.1:p.Met654Val
- NP_001395410.1:p.Met653Val
- NP_001395411.1:p.Met653Val
- NP_001395412.1:p.Met653Val
- NP_001395413.1:p.Met653Val
- NP_001395414.1:p.Met653Val
- NP_001395418.1:p.Met653Val
- NP_001395419.1:p.Met653Val
- NP_001395420.1:p.Met653Val
- NP_001395421.1:p.Met652Val
- NP_001395422.1:p.Met652Val
- NP_001395423.1:p.Met644Val
- NP_001395424.1:p.Met642Val
- NP_001395425.1:p.Met636Val
- NP_001395426.1:p.Met636Val
- NP_001395427.1:p.Met636Val
- NP_001395428.1:p.Met636Val
- NP_001395429.1:p.Met636Val
- NP_001395430.1:p.Met636Val
- NP_001395431.1:p.Met635Val
- NP_001395432.1:p.Met635Val
- NP_001395433.1:p.Met635Val
- NP_001395434.1:p.Met634Val
- NP_001395435.1:p.Met615Val
- NP_001395436.1:p.Met614Val
- NP_001395437.1:p.Met611Val
- NP_001395438.1:p.Met610Val
- NP_001395439.1:p.Met597Val
- NP_001395440.1:p.Met596Val
- NP_001395441.1:p.Met556Val
- NP_001395442.1:p.Met547Val
- NP_001395443.1:p.Met415Val
- NP_009225.1:p.Met1827Val
- NP_009225.1:p.Met1827Val
- NP_009228.2:p.Met1780Val
- NP_009229.2:p.Met723Val
- NP_009229.2:p.Met723Val
- NP_009230.2:p.Asp698Gly
- NP_009231.2:p.Met1848Val
- NP_009235.2:p.Met723Val
- LRG_292t1:c.5479A>G
- LRG_292:g.172193A>G
- LRG_292p1:p.Met1827Val
- NC_000017.10:g.41197808T>C
- NM_007294.3:c.5479A>G
- NM_007298.3:c.2167A>G
- NR_027676.2:n.5656A>G
This HGVS expression did not pass validation- Protein change:
- D1754G
- Links:
- dbSNP: rs771606902
- NCBI 1000 Genomes Browser:
- rs771606902
- Molecular consequence:
- NM_001407571.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407581.1:c.5545A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407582.1:c.5545A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407583.1:c.5542A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407585.1:c.5542A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407587.1:c.5542A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407590.1:c.5539A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407591.1:c.5539A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407593.1:c.5479A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407594.1:c.5479A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407596.1:c.5479A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407597.1:c.5479A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407598.1:c.5479A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407602.1:c.5479A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407603.1:c.5479A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407605.1:c.5479A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407610.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407611.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407612.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407613.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407614.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407615.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407616.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407617.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407618.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407619.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407620.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407621.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407622.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407623.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407624.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407625.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407626.1:c.5476A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407627.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407628.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407629.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407630.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407631.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407632.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407633.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407634.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407635.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407636.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407637.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407638.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407639.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407640.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407641.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407642.1:c.5473A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407644.1:c.5470A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407645.1:c.5470A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407646.1:c.5467A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407647.1:c.5464A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407648.1:c.5422A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407649.1:c.5419A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407652.1:c.5401A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407653.1:c.5401A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407654.1:c.5401A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407655.1:c.5401A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407656.1:c.5398A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407657.1:c.5398A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407658.1:c.5398A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407659.1:c.5395A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407660.1:c.5395A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407661.1:c.5395A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407662.1:c.5395A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407663.1:c.5395A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407664.1:c.5356A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407665.1:c.5356A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407666.1:c.5356A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407667.1:c.5356A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407668.1:c.5356A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407669.1:c.5356A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407670.1:c.5353A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407671.1:c.5353A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407672.1:c.5353A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407673.1:c.5353A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407674.1:c.5353A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407675.1:c.5353A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407676.1:c.5353A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407677.1:c.5353A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407678.1:c.5353A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407679.1:c.5353A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407680.1:c.5353A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407681.1:c.5350A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407682.1:c.5350A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407683.1:c.5350A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407684.1:c.5350A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407685.1:c.5350A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407686.1:c.5350A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407687.1:c.5350A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407688.1:c.5350A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407689.1:c.5350A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407690.1:c.5347A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407691.1:c.5347A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407692.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407694.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407695.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407696.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407697.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407698.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407724.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407725.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407726.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407727.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407728.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407729.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407730.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407731.1:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407732.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407733.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407734.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407735.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407736.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407737.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407738.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407739.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407740.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407741.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407742.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407743.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407744.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407745.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407746.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407747.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407748.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407749.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407750.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407751.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407752.1:c.5335A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407838.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407839.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407841.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407842.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407843.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407844.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407845.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407846.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407847.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407848.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407849.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407850.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407851.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407852.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407853.1:c.5332A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407854.1:c.5405A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407858.1:c.5402A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407859.1:c.5402A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407860.1:c.5402A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407861.1:c.5399A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407862.1:c.5278A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407863.1:c.5275A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407874.1:c.5272A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407875.1:c.5272A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407879.1:c.5269A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407881.1:c.5269A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407882.1:c.5269A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407884.1:c.5269A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407885.1:c.5269A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407886.1:c.5269A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407887.1:c.5269A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407889.1:c.5269A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407894.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407895.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407896.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407897.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407898.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407899.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407900.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407902.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407904.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407906.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407907.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407908.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407909.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407910.1:c.5266A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407915.1:c.5263A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407916.1:c.5263A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407917.1:c.5263A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407918.1:c.5263A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407919.1:c.5227A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407920.1:c.5215A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407921.1:c.5215A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407922.1:c.5215A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407923.1:c.5215A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407924.1:c.5215A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407925.1:c.5215A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407926.1:c.5215A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407927.1:c.5212A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407928.1:c.5212A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407929.1:c.5212A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407930.1:c.5212A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407931.1:c.5212A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407932.1:c.5212A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407933.1:c.5212A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407934.1:c.5209A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407935.1:c.5209A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407936.1:c.5209A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407937.1:c.5282A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407938.1:c.5282A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407939.1:c.5279A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407940.1:c.5279A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407941.1:c.5276A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407942.1:c.5264A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407943.1:c.5261A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407944.1:c.5261A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407945.1:c.5261A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407946.1:c.5146A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407947.1:c.5146A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407948.1:c.5146A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407949.1:c.5146A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407950.1:c.5143A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407951.1:c.5143A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407952.1:c.5143A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407953.1:c.5143A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407954.1:c.5143A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407955.1:c.5143A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407956.1:c.5140A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407957.1:c.5140A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407958.1:c.5140A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407959.1:c.5098A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407960.1:c.5095A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407962.1:c.5095A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407963.1:c.5092A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407964.1:c.5017A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407965.1:c.4972A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407966.1:c.4591A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407967.1:c.4588A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407968.1:c.2875A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407969.1:c.2872A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407970.1:c.2236A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407971.1:c.2236A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407972.1:c.2233A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407973.1:c.2170A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407974.1:c.2170A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407975.1:c.2170A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407976.1:c.2170A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407977.1:c.2170A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407978.1:c.2170A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407979.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407980.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407981.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407982.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407983.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407984.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407985.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407986.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407990.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407991.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407992.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407993.1:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408392.1:c.2164A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408396.1:c.2164A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408397.1:c.2164A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408398.1:c.2164A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408399.1:c.2164A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408400.1:c.2164A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408401.1:c.2164A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408402.1:c.2164A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408403.1:c.2164A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408404.1:c.2164A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408406.1:c.2161A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408407.1:c.2161A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408408.1:c.2161A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408409.1:c.2158A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408410.1:c.2095A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408411.1:c.2092A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408412.1:c.2089A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408413.1:c.2089A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408414.1:c.2089A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408415.1:c.2089A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408416.1:c.2089A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408418.1:c.2053A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408419.1:c.2053A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408420.1:c.2053A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408421.1:c.2050A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408422.1:c.2050A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408423.1:c.2050A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408424.1:c.2050A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408425.1:c.2047A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408426.1:c.2047A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408427.1:c.2047A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408428.1:c.2047A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408429.1:c.2047A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408430.1:c.2047A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408431.1:c.2047A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408432.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408433.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408434.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408435.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408436.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408437.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408438.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408439.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408440.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408441.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408442.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408443.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408444.1:c.2044A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408445.1:c.2041A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408446.1:c.2041A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408447.1:c.2041A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408448.1:c.2041A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408450.1:c.2041A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408451.1:c.2035A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408452.1:c.2029A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408453.1:c.2029A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408454.1:c.2029A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408455.1:c.2029A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408456.1:c.2029A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408457.1:c.2029A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408458.1:c.2026A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408459.1:c.2026A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408460.1:c.2026A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408461.1:c.2026A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408462.1:c.2026A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408463.1:c.2026A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408464.1:c.2026A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408465.1:c.2026A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408466.1:c.2026A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408467.1:c.2026A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408468.1:c.2023A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408469.1:c.2023A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408470.1:c.2023A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408472.1:c.2093A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408473.1:c.2090A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408474.1:c.1969A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408475.1:c.1966A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408476.1:c.1966A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408478.1:c.1960A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408479.1:c.1960A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408480.1:c.1960A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408481.1:c.1957A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408482.1:c.1957A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408483.1:c.1957A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408484.1:c.1957A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408485.1:c.1957A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408489.1:c.1957A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408490.1:c.1957A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408491.1:c.1957A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408492.1:c.1954A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408493.1:c.1954A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408494.1:c.1930A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408495.1:c.1924A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408496.1:c.1906A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408497.1:c.1906A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408498.1:c.1906A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408499.1:c.1906A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408500.1:c.1906A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408501.1:c.1906A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408502.1:c.1903A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408503.1:c.1903A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408504.1:c.1903A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408505.1:c.1900A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408506.1:c.1843A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408507.1:c.1840A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408508.1:c.1831A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408509.1:c.1828A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408510.1:c.1789A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408511.1:c.1786A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408512.1:c.1666A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408513.1:c.1639A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408514.1:c.1243A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_007294.4:c.5479A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_007297.4:c.5338A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_007298.4:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_007299.4:c.2093A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_007300.4:c.5542A>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_007304.2:c.2167A>G - missense variant - [Sequence Ontology: SO:0001583]
- NR_027676.2:n.5656A>G - non-coding transcript variant - [Sequence Ontology: SO:0001619]
- Functional consequence:
- functionally_normal [Sequence Ontology: SO:0002219] - Comment(s)
- The saturation genome editing (SGE) assay for BRCA1 NM_007294.3:c.5479A>G, a MISSENSE variant, produced a function score of -0.28, corresponding to a functional classification of FUNCTIONAL. SGE function score ranges for classification are as follows: ‘functional’, score > -0.748; ‘intermediate’, -0.748 > score > -1.328; ‘non-functional’, score < -1.328. The median synonymous SNV scored 0.0 and the median nonsense SNV scored -2.12.
Condition(s)
Assertion and evidence details
Submission Accession | Submitter | Review Status (Assertion method) | Clinical Significance (Last evaluated) | Origin | Method | Citations |
---|---|---|---|---|---|---|
SCV001237559 | Brotman Baty Institute, University of Washington | no classification provided | not provided | not applicable | in vitro | |
SCV005058284 | Baylor Genetics | criteria provided, single submitter (ACMG Guidelines, 2015) | Uncertain significance (Jan 2, 2024) | unknown | clinical testing | |
SCV005402715 | Lupski Lab, Baylor-Hopkins CMG, Baylor College of Medicine | criteria provided, single submitter (Dawood et al. (medRxiv. 2024)) | Likely Benign (Apr 12, 2024) | germline | curation |
Summary from all submissions
Ethnicity | Origin | Affected | Individuals | Families | Chromosomes tested | Number Tested | Family history | Method |
---|---|---|---|---|---|---|---|---|
not provided | germline | unknown | not provided | not provided | not provided | not provided | not provided | curation |
not provided | unknown | unknown | not provided | not provided | not provided | not provided | not provided | clinical testing |
not provided | not applicable | not applicable | not provided | not provided | not provided | not provided | not provided | in vitro |
Citations
PubMed
Accurate classification of BRCA1 variants with saturation genome editing.
Findlay GM, Daza RM, Martin B, Zhang MD, Leith AP, Gasperini M, Janizek JD, Huang X, Starita LM, Shendure J.
Nature. 2018 Oct;562(7726):217-222. doi: 10.1038/s41586-018-0461-z. Epub 2018 Sep 12.
- PMID:
- 30209399
- PMCID:
- PMC6181777
Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee.
Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.
- PMID:
- 25741868
- PMCID:
- PMC4544753
Details of each submission
From Brotman Baty Institute, University of Washington, SCV001237559.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | in vitro | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | not applicable | not applicable | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Baylor Genetics, SCV005058284.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | unknown | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Lupski Lab, Baylor-Hopkins CMG, Baylor College of Medicine, SCV005402715.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | curation | PubMed (3) |
Description
Each variant was annotated with functional scores from MAVE data which was translated into functional evidence codes. All other evidence codes and combining criteria were adhered to as closely as possible based on the ClinGen VCEP (Variant Curation Expert Panel) gene-specific recommendations. See Supplemental Figure 34 of final paper (Supp Fig. 28 in preprint: doi:10.1101/2024.04.11.24305690) for a table to see which lines of evidence we did not have data for. The ClinGen VCEPs are highly regarded as the gold-standard for gene-specific variant curation and are developed after extensive evaluation of the evidence by clinical and scientific experts for the particular gene to classify genomic variants on a spectrum from pathogenic to benign using the 2015 ACMG/AMP Variant Interpretation Guidelines as a backbone (PMID: 25741868). Reclassification of these VUS variants from gnomAD or All of Us focused only on variants originally prescribed as VUS in ClinVar. To ensure reproducibility, transparency, and increased throughput, all the procedures for annotating variants and assigning evidence codes were codified using Python. All code has been made freely available and is linked in the Code Availability section and all reclassified variants with evidence codes used can be found in Tables S18-19 (preprint: doi:10.1101/2024.04.11.24305690). For the MAVE data, the clinical curation and clinical strength assignment as per the ClinGen recommendations in Brnich et al. (2020) (PMID: 31892348) for or against pathogenicity or benignity of each of these MAVE datasets utilized in this study were previously published in Fayer et al. (2021) (PMID: 34793697).In brief, for BRCA1 variants, if a variant was categorized as FUNC (functional), it was assigned BS3 evidence and no PS3 evidence, whereas if it was categorized as LOF (loss of function), the variant was assigned PS3 evidence and no BS3 evidence. Variants categorized as INT (intermediate) were left unannotated. For the BRCA1 combining criteria, greater than or equal to 1 criteria of strong benign evidence was enough to reclassify the VUS as Likely Benign. This variant GRCh37:17:41197808:T>C was assigned evidence codes ['BS3', 'BP4'] and an overall classification of Likely Benign
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
Last Updated: Nov 24, 2024