U.S. flag

An official website of the United States government

NM_001023570.4(IQCB1):c.1381C>T (p.Arg461Ter) AND Renal dysplasia and retinal aplasia

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jun 23, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001003059.1

Allele description [Variation Report for NM_001023570.4(IQCB1):c.1381C>T (p.Arg461Ter)]

NM_001023570.4(IQCB1):c.1381C>T (p.Arg461Ter)

Gene:
IQCB1:IQ motif containing B1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3q13.33
Genomic location:
Preferred name:
NM_001023570.4(IQCB1):c.1381C>T (p.Arg461Ter)
HGVS:
  • NC_000003.12:g.121781772G>A
  • NG_015887.1:g.58308C>T
  • NM_001023570.4:c.1381C>TMANE SELECT
  • NM_001023571.4:c.982C>T
  • NM_001319107.2:c.1381C>T
  • NP_001018864.2:p.Arg461Ter
  • NP_001018865.2:p.Arg328Ter
  • NP_001306036.1:p.Arg461Ter
  • NC_000003.11:g.121500619G>A
  • NM_001023570.2:c.1381C>T
  • NM_001023570.3:c.1381C>T
  • NM_001319107.2:c.1381C>T
  • NP_001018864.2:p.Arg461*
  • NR_134968.2:n.1466C>T
Protein change:
R328*; ARG461TER
Links:
OMIM: 609237.0001; dbSNP: rs121918244
NCBI 1000 Genomes Browser:
rs121918244
Molecular consequence:
  • NR_134968.2:n.1466C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NM_001023570.4:c.1381C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001023571.4:c.982C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001319107.2:c.1381C>T - nonsense - [Sequence Ontology: SO:0001587]

Condition(s)

Name:
Renal dysplasia and retinal aplasia (SLSN)
Synonyms:
Renal dysplasia retinal aplasia; Senior-Loken syndrome
Identifiers:
MONDO: MONDO:0017842; MedGen: C0403553; OMIM: PS266900

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001161116Sharon lab, Hadassah-Hebrew University Medical Center
no assertion criteria provided
Pathogenic
(Jun 23, 2019)
inheritedresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedinheritedyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Sharon lab, Hadassah-Hebrew University Medical Center, SCV001161116.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024