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NM_003002.4(SDHD):c.34G>A (p.Gly12Ser) AND Carney-Stratakis syndrome

Germline classification:
Likely benign (1 submission)
Last evaluated:
May 28, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000988742.9

Allele description [Variation Report for NM_003002.4(SDHD):c.34G>A (p.Gly12Ser)]

NM_003002.4(SDHD):c.34G>A (p.Gly12Ser)

Genes:
LOC126861339:BRD4-independent group 4 enhancer GRCh37_chr11:111957035-111958234 [Gene]
SDHD:succinate dehydrogenase complex subunit D [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11q23.1
Genomic location:
Preferred name:
NM_003002.4(SDHD):c.34G>A (p.Gly12Ser)
Other names:
SDHD, GLY12SER (rs34677591)
HGVS:
  • NC_000011.10:g.112086941G>A
  • NG_012337.3:g.5095G>A
  • NG_033145.1:g.4858C>T
  • NM_001276503.2:c.34G>A
  • NM_001276504.2:c.34G>A
  • NM_001276506.2:c.34G>A
  • NM_003002.3(SDHD):c.34G>A
  • NM_003002.4:c.34G>AMANE SELECT
  • NP_001263432.1:p.Gly12Ser
  • NP_001263433.1:p.Gly12Ser
  • NP_001263435.1:p.Gly12Ser
  • NP_002993.1:p.Gly12Ser
  • LRG_9t1:c.34G>A
  • LRG_9:g.5095G>A
  • LRG_9p1:p.Gly12Ser
  • NC_000011.9:g.111957665G>A
  • NM_001276506.1:c.34G>A
  • NM_003002.2:c.34G>A
  • NM_003002.3(SDHD):c.34G>A
  • NM_003002.3:c.34G>A
  • NM_003002.4:c.34G>A
  • NR_077060.2:n.69G>A
  • O14521:p.Gly12Ser
  • p.G12S
Protein change:
G12S; GLY12SER
Links:
UniProtKB: O14521#VAR_017870; OMIM: 602690.0011; dbSNP: rs34677591
NCBI 1000 Genomes Browser:
rs34677591
Molecular consequence:
  • NM_001276503.2:c.34G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001276504.2:c.34G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001276506.2:c.34G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_003002.4:c.34G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NR_077060.2:n.69G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Carney-Stratakis syndrome
Synonyms:
Paraganglioma and gastric stromal sarcoma; Paraganglioma and gastrointestinal stromal tumor; Paraganglioma and GIST; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0011740; MedGen: C1847319; Orphanet: 97286; OMIM: 606864

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001138592Mendelics
criteria provided, single submitter

(Mendelics Assertion Criteria 2017)
Likely benign
(May 28, 2019)
unknownclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Mendelics, SCV001138592.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 24, 2024