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NM_018972.4(GDAP1):c.692C>T (p.Pro231Leu) AND Charcot-Marie-Tooth disease

Germline classification:
Conflicting interpretations of pathogenicity (2 submissions)
Last evaluated:
Aug 14, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000857208.4

Allele description [Variation Report for NM_018972.4(GDAP1):c.692C>T (p.Pro231Leu)]

NM_018972.4(GDAP1):c.692C>T (p.Pro231Leu)

Gene:
GDAP1:ganglioside induced differentiation associated protein 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
8q21.11
Genomic location:
Preferred name:
NM_018972.4(GDAP1):c.692C>T (p.Pro231Leu)
HGVS:
  • NC_000008.11:g.74363051C>T
  • NG_008787.3:g.46922C>T
  • NM_001040875.4:c.488C>T
  • NM_001362929.2:c.365C>T
  • NM_001362930.2:c.518C>T
  • NM_001362931.2:c.692C>T
  • NM_001362932.2:c.365C>T
  • NM_018972.4:c.692C>TMANE SELECT
  • NP_001035808.1:p.Pro163Leu
  • NP_001349858.1:p.Pro122Leu
  • NP_001349859.1:p.Pro173Leu
  • NP_001349860.1:p.Pro231Leu
  • NP_001349861.1:p.Pro122Leu
  • NP_061845.2:p.Pro231Leu
  • LRG_244t1:c.692C>T
  • LRG_244:g.46922C>T
  • NC_000008.10:g.75275286C>T
  • NM_001040875.2:c.488C>T
  • NM_018972.2:c.692C>T
Protein change:
P122L; PRO231LEU
Links:
OMIM: 606598.0013; dbSNP: rs121908114
NCBI 1000 Genomes Browser:
rs121908114
Molecular consequence:
  • NM_001040875.4:c.488C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001362929.2:c.365C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001362930.2:c.518C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001362931.2:c.692C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001362932.2:c.365C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_018972.4:c.692C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Charcot-Marie-Tooth disease
Synonyms:
Charcot-Marie-Tooth Neuropathy
Identifiers:
MONDO: MONDO:0015626; MedGen: C0007959; OMIM: PS118220

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000999790Genesis Genome Database
no assertion criteria provided
Uncertain significance
(Aug 14, 2019)
germlineresearch

SCV001190052Inherited Neuropathy Consortium
no assertion criteria provided
Likely pathogenicinheritedresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedinheritedyesnot providednot providednot providednot providednot providedresearch
not providedgermlineyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Genesis Genome Database, SCV000999790.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From Inherited Neuropathy Consortium, SCV001190052.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024