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NM_000350.3(ABCA4):c.5882G>A (p.Gly1961Glu) AND Inborn genetic diseases

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Sep 7, 2014
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000624210.10

Allele description [Variation Report for NM_000350.3(ABCA4):c.5882G>A (p.Gly1961Glu)]

NM_000350.3(ABCA4):c.5882G>A (p.Gly1961Glu)

Gene:
ABCA4:ATP binding cassette subfamily A member 4 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1p22.1
Genomic location:
Preferred name:
NM_000350.3(ABCA4):c.5882G>A (p.Gly1961Glu)
HGVS:
  • NC_000001.11:g.94008251C>T
  • NG_009073.1:g.117899G>A
  • NG_009073.2:g.117897G>A
  • NM_000350.3:c.5882G>AMANE SELECT
  • NM_001425324.1:c.5660G>A
  • NP_000341.2:p.Gly1961Glu
  • NP_000341.2:p.Gly1961Glu
  • NP_001412253.1:p.Gly1887Glu
  • NC_000001.10:g.94473807C>T
  • NM_000350.2:c.5882G>A
  • P78363:p.Gly1961Glu
Protein change:
G1887E; GLY1961GLU
Links:
UniProtKB: P78363#VAR_008475; OMIM: 601691.0007; dbSNP: rs1800553
NCBI 1000 Genomes Browser:
rs1800553
Molecular consequence:
  • NM_000350.3:c.5882G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001425324.1:c.5660G>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000741007Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Pathogenic
(Sep 7, 2014)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Jewish Yemenite/Moraccangermlineyes1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV000741007.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Jewish Yemenite/Moraccan1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Nov 24, 2024