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NM_001378452.1(ITPR1):c.7648G>A (p.Gly2550Arg) AND Inborn genetic diseases

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Mar 15, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000622722.2

Allele description [Variation Report for NM_001378452.1(ITPR1):c.7648G>A (p.Gly2550Arg)]

NM_001378452.1(ITPR1):c.7648G>A (p.Gly2550Arg)

Genes:
LOC126806590:MED14-independent group 3 enhancer GRCh37_chr3:4855759-4856958 [Gene]
ITPR1:inositol 1,4,5-trisphosphate receptor type 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p26.1
Genomic location:
Preferred name:
NM_001378452.1(ITPR1):c.7648G>A (p.Gly2550Arg)
HGVS:
  • NC_000003.12:g.4814509G>A
  • NG_016144.1:g.326162G>A
  • NM_001099952.4:c.7504G>A
  • NM_001168272.2:c.7603G>A
  • NM_001378452.1:c.7648G>AMANE SELECT
  • NM_002222.7:c.7459G>A
  • NP_001093422.2:p.Gly2502Arg
  • NP_001161744.1:p.Gly2535Arg
  • NP_001161744.1:p.Gly2535Arg
  • NP_001365381.1:p.Gly2550Arg
  • NP_002213.5:p.Gly2487Arg
  • NC_000003.11:g.4856193G>A
  • NM_001168272.1:c.7603G>A
  • NM_002222.5:c.7459G>A
Protein change:
G2487R
Links:
dbSNP: rs1553757628
NCBI 1000 Genomes Browser:
rs1553757628
Molecular consequence:
  • NM_001099952.4:c.7504G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001168272.2:c.7603G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001378452.1:c.7648G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_002222.7:c.7459G>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000741306Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Uncertain significance
(Mar 15, 2016)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Hispanicgermlineyes1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV000741306.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Hispanic1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Oct 8, 2024