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NM_016492.5(RANGRF):c.77+5G>A AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
May 7, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000434813.15

Allele description [Variation Report for NM_016492.5(RANGRF):c.77+5G>A]

NM_016492.5(RANGRF):c.77+5G>A

Genes:
RANGRF:RAN guanine nucleotide release factor [Gene - OMIM - HGNC]
SLC25A35:solute carrier family 25 member 35 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17p13.1
Genomic location:
Preferred name:
NM_016492.5(RANGRF):c.77+5G>A
HGVS:
  • NC_000017.11:g.8288870G>A
  • NG_028189.1:g.5220G>A
  • NG_194662.1:g.48G>A
  • NM_001177801.2:c.77+5G>A
  • NM_001177802.2:c.77+5G>A
  • NM_001320871.2:c.*43-438C>T
  • NM_001320872.2:c.*613C>T
  • NM_001330127.2:c.77+5G>A
  • NM_016492.5:c.77+5G>AMANE SELECT
  • NM_201520.3:c.*746C>T
  • NC_000017.10:g.8192188G>A
  • NM_016492.4:c.77+5G>A
  • NR_135483.2:n.2291C>T
  • NR_135484.2:n.2127C>T
Links:
dbSNP: rs369372561
NCBI 1000 Genomes Browser:
rs369372561
Molecular consequence:
  • NM_001320872.2:c.*613C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_201520.3:c.*746C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001177801.2:c.77+5G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001177802.2:c.77+5G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001320871.2:c.*43-438C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001330127.2:c.77+5G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_016492.5:c.77+5G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NR_135483.2:n.2291C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_135484.2:n.2127C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000535829GeneDx
criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)
Uncertain significance
(May 7, 2024)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000535829.9

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

Has not been previously published as pathogenic or benign to our knowledge; In silico analysis supports a deleterious effect on splicing; Variants in candidate genes are classified as variants of uncertain significance in accordance with ACMG guidelines (PMID: 25741868)

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 24, 2024