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NM_016627.5(AMZ2):c.521C>A (p.Thr174Lys) AND Monoclonal B-Cell Lymphocytosis

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Dec 15, 2015
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000208565.9

Allele description [Variation Report for NM_016627.5(AMZ2):c.521C>A (p.Thr174Lys)]

NM_016627.5(AMZ2):c.521C>A (p.Thr174Lys)

Gene:
AMZ2:archaelysin family metallopeptidase 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17q24.2
Genomic location:
Preferred name:
NM_016627.5(AMZ2):c.521C>A (p.Thr174Lys)
HGVS:
  • NC_000017.11:g.68251113C>A
  • NG_051827.1:g.49985C>A
  • NM_001033569.2:c.521C>A
  • NM_001033570.2:c.521C>A
  • NM_001033571.1:c.521C>A
  • NM_001033572.1:c.521C>A
  • NM_001033574.2:c.347C>A
  • NM_001289054.2:c.521C>A
  • NM_001289056.2:c.521C>A
  • NM_001346471.1:c.521C>A
  • NM_001346472.1:c.521C>A
  • NM_001346473.1:c.521C>A
  • NM_001346474.2:c.521C>A
  • NM_001346475.2:c.521C>A
  • NM_001346476.2:c.521C>A
  • NM_001346477.2:c.521C>A
  • NM_001346478.2:c.521C>A
  • NM_001346479.2:c.521C>A
  • NM_001346480.1:c.347C>A
  • NM_001346481.1:c.419C>A
  • NM_001346482.1:c.419C>A
  • NM_001346483.2:c.419C>A
  • NM_001346484.2:c.419C>A
  • NM_001346485.2:c.353C>A
  • NM_016627.5:c.521C>AMANE SELECT
  • NP_001028741.1:p.Thr174Lys
  • NP_001028742.1:p.Thr174Lys
  • NP_001028743.1:p.Thr174Lys
  • NP_001028743.1:p.Thr174Lys
  • NP_001028744.1:p.Thr174Lys
  • NP_001028746.1:p.Thr116Lys
  • NP_001275983.1:p.Thr174Lys
  • NP_001275985.1:p.Thr174Lys
  • NP_001333400.1:p.Thr174Lys
  • NP_001333401.1:p.Thr174Lys
  • NP_001333402.1:p.Thr174Lys
  • NP_001333403.1:p.Thr174Lys
  • NP_001333404.1:p.Thr174Lys
  • NP_001333405.1:p.Thr174Lys
  • NP_001333406.1:p.Thr174Lys
  • NP_001333407.1:p.Thr174Lys
  • NP_001333408.1:p.Thr174Lys
  • NP_001333409.1:p.Thr116Lys
  • NP_001333410.1:p.Thr140Lys
  • NP_001333411.1:p.Thr140Lys
  • NP_001333412.1:p.Thr140Lys
  • NP_001333413.1:p.Thr140Lys
  • NP_001333414.1:p.Thr118Lys
  • NP_057711.3:p.Thr174Lys
  • NC_000017.10:g.66247254C>A
  • NR_144442.2:n.1184C>A
  • NR_144443.2:n.1194C>A
Protein change:
T116K
Links:
dbSNP: rs782698957
NCBI 1000 Genomes Browser:
rs782698957
Molecular consequence:
  • NM_001033569.2:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001033570.2:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001033571.1:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001033572.1:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001033574.2:c.347C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001289054.2:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001289056.2:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346471.1:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346472.1:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346473.1:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346474.2:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346475.2:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346476.2:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346477.2:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346478.2:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346479.2:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346480.1:c.347C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346481.1:c.419C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346482.1:c.419C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346483.2:c.419C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346484.2:c.419C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346485.2:c.353C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_016627.5:c.521C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NR_144442.2:n.1184C>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_144443.2:n.1194C>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Monoclonal B-Cell Lymphocytosis
Identifiers:
MedGen: C2698259

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000258946Karsan Lab, BC Cancer Agency - BCCA Personal OncoGenomics
no assertion criteria provided
Uncertain significance
(Dec 15, 2015)
somaticresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedsomaticyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Karsan Lab, BC Cancer Agency - BCCA Personal OncoGenomics, SCV000258946.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1somaticyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 30, 2024