U.S. flag

An official website of the United States government

NM_001130987.2(DYSF):c.4989_4993delinsCCCC (p.Glu1663fs) AND Autosomal recessive limb-girdle muscular dystrophy type 2B

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Dec 1, 2006
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000007053.8

Allele description [Variation Report for NM_001130987.2(DYSF):c.4989_4993delinsCCCC (p.Glu1663fs)]

NM_001130987.2(DYSF):c.4989_4993delinsCCCC (p.Glu1663fs)

Gene:
DYSF:dysferlin [Gene - OMIM - HGNC]
Variant type:
Indel
Cytogenetic location:
2p13.2
Genomic location:
Preferred name:
NM_001130987.2(DYSF):c.4989_4993delinsCCCC (p.Glu1663fs)
HGVS:
  • NC_000002.12:g.71660637_71660641delinsCCCC
  • NG_008694.1:g.212015_212019delinsCCCC
  • NM_001130455.2:c.4875_4879delinsCCCC
  • NM_001130976.2:c.4830_4834delinsCCCC
  • NM_001130977.2:c.4893_4897delinsCCCC
  • NM_001130978.2:c.4935_4939delinsCCCC
  • NM_001130979.2:c.4965_4969delinsCCCC
  • NM_001130980.2:c.4923_4927delinsCCCC
  • NM_001130981.2:c.4986_4990delinsCCCC
  • NM_001130982.2:c.4968_4972delinsCCCC
  • NM_001130983.2:c.4938_4942delinsCCCC
  • NM_001130984.2:c.4896_4900delinsCCCC
  • NM_001130985.2:c.4926_4930delinsCCCC
  • NM_001130986.2:c.4833_4837delinsCCCC
  • NM_001130987.2:c.4989_4993delinsCCCCMANE SELECT
  • NM_003494.4:c.4872_4876delinsCCCC
  • NP_001123927.1:p.Glu1625fs
  • NP_001124448.1:p.Glu1610fs
  • NP_001124449.1:p.Glu1631fs
  • NP_001124450.1:p.Glu1645fs
  • NP_001124451.1:p.Glu1655fs
  • NP_001124452.1:p.Glu1641fs
  • NP_001124453.1:p.Glu1662fs
  • NP_001124454.1:p.Glu1656fs
  • NP_001124455.1:p.Glu1646fs
  • NP_001124456.1:p.Glu1632fs
  • NP_001124457.1:p.Glu1642fs
  • NP_001124458.1:p.Glu1611fs
  • NP_001124459.1:p.Glu1663fs
  • NP_003485.1:p.Glu1624fs
  • LRG_845t1:c.4872_4876delinsCCCC
  • LRG_845t2:c.4989_4993delinsCCCC
  • LRG_845:g.212015_212019delinsCCCC
  • LRG_845p1:p.Glu1624fs
  • LRG_845p2:p.Glu1663fs
  • NC_000002.11:g.71887767_71887771delinsCCCC
Protein change:
E1610fs
Links:
OMIM: 603009.0005; dbSNP: rs786200896
NCBI 1000 Genomes Browser:
rs786200896
Molecular consequence:
  • NM_001130455.2:c.4875_4879delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130976.2:c.4830_4834delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130977.2:c.4893_4897delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130978.2:c.4935_4939delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130979.2:c.4965_4969delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130980.2:c.4923_4927delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130981.2:c.4986_4990delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130982.2:c.4968_4972delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130983.2:c.4938_4942delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130984.2:c.4896_4900delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130985.2:c.4926_4930delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130986.2:c.4833_4837delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001130987.2:c.4989_4993delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_003494.4:c.4872_4876delinsCCCC - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Name:
Autosomal recessive limb-girdle muscular dystrophy type 2B (LGMDR2)
Synonyms:
Limb-girdle muscular dystrophy, type 2B; Muscular dystrophy, limb-girdle, type 3; MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 2
Identifiers:
MONDO: MONDO:0009676; MedGen: C1850889; Orphanet: 268; OMIM: 253601

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000027249OMIM
no assertion criteria provided
Pathogenic
(Dec 1, 2006)
germlineliterature only

PubMed (3)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Mutation impact on dysferlin inferred from database analysis and computer-based structural predictions.

Therrien C, Dodig D, Karpati G, Sinnreich M.

J Neurol Sci. 2006 Dec 1;250(1-2):71-8. Epub 2006 Sep 22.

PubMed [citation]
PMID:
16996541

Lariat branch point mutation in the dysferlin gene with mild limb-girdle muscular dystrophy.

Sinnreich M, Therrien C, Karpati G.

Neurology. 2006 Apr 11;66(7):1114-6.

PubMed [citation]
PMID:
16606933
See all PubMed Citations (3)

Details of each submission

From OMIM, SCV000027249.5

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (3)

Description

In 8 Libyan Jewish families with limb-girdle muscular dystrophy type 2B (LGMDR2; 253601), Bashir et al. (1998) found that affected individuals were homozygous for a 1-bp deletion of guanine and a C-G transversion at codon 1322 of the DYSF gene, resulting in a frameshift and premature stop codon at position 1331 (numbering based on a partial DYSF amino acid sequence). Subsequently, Therrien et al. (2006) reported the mutation as an insertion/deletion (4872delinsCCCC). In a ninth Libyan Jewish family, with a single affected member, the mutation was detected in single copy; one of the parents (who did not carry the mutation) was of Romanian origin. The 25 patients in these families showed onset of the disease between 12 and 39 years of age (mean 19.5 +/- 5 years). All had lower limb involvement on average 9 years before upper limb symptoms. Thirteen patients (52%) presented with distal lower limb muscle weakness, mostly of the gastrocnemius, with some complaining of transient calf enlargement. Intrafamilial variability was seen in the distribution of muscle weakness. Only 6 patients had lost the ability to walk independently; all of these were older than 35 years. Muscle biopsy showed chronic myopathic changes, and creatine kinase was elevated 10 to 25 times the normal rate in all affected individuals.

In 2 Italian sisters with severe LGMDR2, Sinnreich et al. (2006) identified homozygosity for the insertion/deletion mutation in the DYSF gene, which they characterized as a 1-bp deletion (4872delG) and a 4876G-C transversion, that was previously reported by Bashir et al. (1998). Each parent was heterozygous for the insertion/deletion mutation. The girls had onset in the second decade of proximal muscle weakness and wasting. Their 70-year-old mother, who had had mild proximal weakness since her forties, was compound heterozygous for the indel mutation and a splice site mutation (603009.0016).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024