C4310704[trait identifier] AND "Counsyl"[submitter] - ClinVar - NCBI

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Items: 13

	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 56591	NM_017739.4(POMGNT1):c.1876del (p.Val626fs)	POMGNT1, TSPAN1 (V483fs +2 more)	Deletion (frameshift variant +1 more)	Retinitis pigmentosa 76 +4 more	GPathogenic/Likely pathogenic
Select item 56587	NM_017739.4(POMGNT1):c.1769G>A (p.Trp590Ter)	POMGNT1, TSPAN1 (W590* +2 more)	Single nucleotide variant (nonsense)	Muscle eye brain disease +5 more	GPathogenic/Likely pathogenic
Select item 370969	NM_017739.4(POMGNT1):c.1694_1695del (p.Ser565fs)	POMGNT1, TSPAN1 (S543fs +2 more)	Microsatellite (frameshift variant)	Autosomal recessive limb-girdle muscular dystrophy type 2O +4 more	GPathogenic/Likely pathogenic
Select item 3997	NM_017739.4(POMGNT1):c.1666G>A (p.Asp556Asn)	POMGNT1, TSPAN1 (D556N +2 more)	Single nucleotide variant (missense variant)	Autosomal recessive limb-girdle muscular dystrophy type 2O +7 more	GConflicting classifications of pathogenicity
Select item 56582	NM_017739.4(POMGNT1):c.1539+1G>A	POMGNT1, TSPAN1	Single nucleotide variant (splice donor variant)	not provided +10 more	GPathogenic
Select item 4000	NM_017739.4(POMGNT1):c.1469G>A (p.Cys490Tyr)	POMGNT1, TSPAN1 (C490Y +2 more)	Single nucleotide variant (missense variant)	Autosomal recessive limb-girdle muscular dystrophy type 2O +6 more	GPathogenic/Likely pathogenic
Select item 422459	NM_017739.4(POMGNT1):c.1463G>A (p.Arg488Gln)	POMGNT1, TSPAN1 (R488Q +2 more)	Single nucleotide variant (missense variant)	not provided +3 more	GConflicting classifications of pathogenicity
Select item 3992	NM_017739.4(POMGNT1):c.1324C>T (p.Arg442Cys)	POMGNT1, TSPAN1 (R442C +2 more)	Single nucleotide variant (missense variant)	Autosomal recessive limb-girdle muscular dystrophy +6 more	GPathogenic/Likely pathogenic
Select item 56578	NM_017739.4(POMGNT1):c.1285-2A>G	POMGNT1, TSPAN1	Single nucleotide variant (splice acceptor variant)	Muscular dystrophy-dystroglycanopathy +4 more	GPathogenic/Likely pathogenic
Select item 370499	NM_017739.4(POMGNT1):c.1027-2_1027-1del	POMGNT1, TSPAN1	Deletion (splice acceptor variant)	Autosomal recessive limb-girdle muscular dystrophy type 2O +5 more	GConflicting classifications of pathogenicity
Select item 56610	NM_017739.4(POMGNT1):c.931C>T (p.Arg311Ter)	POMGNT1, TSPAN1 (R311* +2 more)	Single nucleotide variant (nonsense)	Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 +3 more	GPathogenic
Select item 56604	NM_017739.4(POMGNT1):c.643C>T (p.Arg215Ter)	POMGNT1, TSPAN1 (R215* +2 more)	Single nucleotide variant (nonsense)	Autosomal recessive limb-girdle muscular dystrophy type 2O +4 more	GPathogenic
Select item 265399	NM_017739.4(POMGNT1):c.636C>T (p.Phe212=)	TSPAN1, POMGNT1	Single nucleotide variant (synonymous variant)	Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +6 more	GPathogenic