| | NPHP3-ACAD11, NPHP3 (S1314T) | Single nucleotide variant (non-coding transcript variant +1 more) | NPHP3-related Meckel-like syndrome +5 more | |
| | NPHP3, NPHP3-ACAD11 (P1303S) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis 3 +3 more | |
| | NPHP3, NPHP3-ACAD11 (K1301Q) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +4 more | |
| | NPHP3, NPHP3-ACAD11 (G1300R) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (G1299D) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +4 more | GConflicting classifications of pathogenicity |
| | NPHP3, NPHP3-ACAD11 (E1278V) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (G1275del) | Microsatellite (non-coding transcript variant +1 more) | NPHP3-related Meckel-like syndrome +3 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +4 more | |
| | | Single nucleotide variant (intron variant) | NPHP3-related Meckel-like syndrome +3 more | |
| | | Single nucleotide variant (intron variant) | Nephronophthisis 3 +3 more | |
| | NPHP3, NPHP3-ACAD11 (L1270P) | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +4 more | |
| | NPHP3, NPHP3-ACAD11 (V1269M) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis 3 +3 more | |
| | NPHP3-ACAD11, NPHP3 (R1259*) | Single nucleotide variant (non-coding transcript variant +1 more) | NPHP3-related Meckel-like syndrome +3 more | GPathogenic/Likely pathogenic |
| | NPHP3, NPHP3-ACAD11 (R1255W) | Single nucleotide variant (non-coding transcript variant +1 more) | NPHP3-related Meckel-like syndrome +5 more | GConflicting classifications of pathogenicity |
| | NPHP3, NPHP3-ACAD11 (L1253V) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis 3 +2 more | |
| | NPHP3, NPHP3-ACAD11 (L1241S) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | | Single nucleotide variant (intron variant) | Nephronophthisis +3 more | |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +6 more | |
| | NPHP3-ACAD11, NPHP3 (A1221V) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified +5 more | GConflicting classifications of pathogenicity |
| | NPHP3, NPHP3-ACAD11 (S1217R) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | | Single nucleotide variant (intron variant) | not specified +5 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | NPHP3-related Meckel-like syndrome +3 more | GConflicting classifications of pathogenicity |
| | NPHP3, NPHP3-ACAD11 (P1174L) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (R1167C) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +4 more | |
| | NPHP3, NPHP3-ACAD11 (R1165Q) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified +5 more | GConflicting classifications of pathogenicity |
| | NPHP3, NPHP3-ACAD11 (C1145R) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +5 more | |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (R1125Q) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis 3 +3 more | |
| | NPHP3, NPHP3-ACAD11 (R1125*) | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +4 more | |
| | NPHP3, NPHP3-ACAD11 (L1109R) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +4 more | |
| | NPHP3, NPHP3-ACAD11 (Y1104C) | Single nucleotide variant (non-coding transcript variant +1 more) | Kidney disorder +5 more | |
| | NPHP3, NPHP3-ACAD11 (N1097S) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +4 more | |
| | NPHP3, NPHP3-ACAD11 (L1096F) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis 3 +2 more | |
| | NPHP3, NPHP3-ACAD11 (Q1079H) | Single nucleotide variant (non-coding transcript variant +1 more) | NPHP3-related Meckel-like syndrome +4 more | |
| | NPHP3, NPHP3-ACAD11 (G1069R) | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +4 more | |
| | | Single nucleotide variant (intron variant) | Nephronophthisis +3 more | |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +6 more | |
| | NPHP3, NPHP3-ACAD11 (A1046G) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +3 more | |
| | | Single nucleotide variant (intron variant) | NPHP3-related Meckel-like syndrome +3 more | |
| | | Single nucleotide variant (intron variant) | Renal-hepatic-pancreatic dysplasia 1 +3 more | |
| | | Single nucleotide variant (intron variant) | Nephronophthisis +3 more | |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +6 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +4 more | GConflicting classifications of pathogenicity |
| | NPHP3, NPHP3-ACAD11 (A1021V) | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +4 more | |
| | NPHP3, NPHP3-ACAD11 (G1020D) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +4 more | |
| | NPHP3, NPHP3-ACAD11 (E1013D) | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +3 more | |
| | NPHP3, NPHP3-ACAD11 (A1011V) | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +5 more | |
| | NPHP3, NPHP3-ACAD11 (K999Q) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (V996M) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis 3 +5 more | |
| | NPHP3, NPHP3-ACAD11 (P979L) | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +3 more | |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | NPHP3-related Meckel-like syndrome +4 more | |
| | | Single nucleotide variant (intron variant) | Nephronophthisis +3 more | |
| | | Single nucleotide variant (intron variant) | Renal-hepatic-pancreatic dysplasia 1 +3 more | |
| | | Single nucleotide variant (intron variant) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (Q961E) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis 3 +4 more | |
| | NPHP3-ACAD11, NPHP3 (R951*) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | GPathogenic/Likely pathogenic |
| | NPHP3, NPHP3-ACAD11 (M939I) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +4 more | GConflicting classifications of pathogenicity |
| | NPHP3, NPHP3-ACAD11 (Q928R) | Single nucleotide variant (non-coding transcript variant +1 more) | NPHP3-related Meckel-like syndrome +3 more | |
| | NPHP3, NPHP3-ACAD11 (D924N) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +4 more | |
| | | Deletion (splice acceptor variant) | Renal-hepatic-pancreatic dysplasia 1 +4 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (intron variant) | Renal-hepatic-pancreatic dysplasia 1 +4 more | |
| | NPHP3, NPHP3-ACAD11 (L889P) | Single nucleotide variant (non-coding transcript variant +1 more) | Inborn genetic diseases +4 more | |
| | NPHP3-ACAD11, NPHP3 (H883Y) | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +3 more | |
| | NPHP3, NPHP3-ACAD11 (Q855*) | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +4 more | GPathogenic/Likely pathogenic |
| | NPHP3, NPHP3-ACAD11 (Y844C) | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +4 more | |
| | NPHP3, NPHP3-ACAD11 (E833Q) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +4 more | |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis 3 +4 more | GConflicting classifications of pathogenicity |
| | NPHP3, NPHP3-ACAD11 (I771V) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | | Single nucleotide variant (splice acceptor variant) | not provided +3 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (intron variant) | Renal-hepatic-pancreatic dysplasia 1 +4 more | |
| | NPHP3, NPHP3-ACAD11 (M768L) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (R756W) | Single nucleotide variant (non-coding transcript variant +1 more) | Inborn genetic diseases +5 more | |
| | NPHP3, NPHP3-ACAD11 (I755V) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (I755L) | Single nucleotide variant (non-coding transcript variant +1 more) | NPHP3-related Meckel-like syndrome +3 more | |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | NPHP3-related Meckel-like syndrome +3 more | |
| | NPHP3, NPHP3-ACAD11 (C741Y) | Single nucleotide variant (non-coding transcript variant +1 more) | Inborn genetic diseases +4 more | |
| | | Single nucleotide variant (intron variant) | Nephronophthisis +4 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (splice donor variant) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (R724C) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (G719S) | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +6 more | |
| | NPHP3, NPHP3-ACAD11 (H703Q) | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +3 more | |
| | NPHP3, NPHP3-ACAD11 (R702*) | Single nucleotide variant (non-coding transcript variant +1 more) | NPHP3-related Meckel-like syndrome +5 more | |
| | NPHP3, NPHP3-ACAD11 (K694E) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +5 more | |
| | | Single nucleotide variant (splice donor variant) | Nephronophthisis +3 more | GPathogenic/Likely pathogenic |
| | NPHP3, NPHP3-ACAD11 (V631I) | Single nucleotide variant (missense variant) | Nephronophthisis +3 more | |
| | | Deletion (intron variant) | NPHP3-related Meckel-like syndrome +3 more | |
| | NPHP3-ACAD11, NPHP3 (I625V) | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +3 more | |
| | NPHP3, NPHP3-ACAD11 (I619M) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (W606*) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +4 more | GPathogenic/Likely pathogenic |
| | NPHP3, NPHP3-ACAD11 (R605C) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis 3 +6 more | |
| | NPHP3, NPHP3-ACAD11 (T593A) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis 3 +3 more | |
| | NPHP3, NPHP3-ACAD11 (S586C) | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +3 more | |
| | NPHP3, NPHP3-ACAD11 (Q511H) | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +5 more | |
| | NPHP3, NPHP3-ACAD11 (Y509H) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (G505R) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis +3 more | |
| | NPHP3, NPHP3-ACAD11 (E492D) | Single nucleotide variant (non-coding transcript variant +1 more) | Nephronophthisis 3 +3 more | |
| | NPHP3, NPHP3-ACAD11 (M491L) | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +3 more | |
| | NPHP3, NPHP3-ACAD11 (I471V) | Single nucleotide variant (non-coding transcript variant +1 more) | Renal-hepatic-pancreatic dysplasia 1 +3 more | |