C0376358[trait identifier] AND "Science for Life laboratory, Karolinsk - ClinVar - NCBI

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	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 161642	NM_005957.5(MTHFR):c.1739del (p.Phe580fs)	MTHFR (F621fs +1 more)	Deletion (frameshift variant)	Malignant tumor of prostate	GUncertain significance
Select item 161578	NM_001243.5(TNFRSF8):c.271G>T (p.Asp91Tyr)	TNFRSF8 (D91Y)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161534	NM_018090.5(NECAP2):c.462G>T (p.Glu154Asp)	NECAP2 (E154D +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161563	NM_001391906.1(EIF4G3):c.2710G>T (p.Asp904Tyr)	EIF4G3 (D884Y +10 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161781	NM_032236.8(USP48):c.1243A>G (p.Met415Val)	USP48 (M415V +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161791	NM_001281956.2(CSMD2):c.7808G>T (p.Arg2603Leu)	CSMD2 (R2605L +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161658	NM_001394062.1(MACF1):c.1508G>C (p.Arg503Thr)	MACF1 (R508T +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161659	NM_012090.4(MACF1):c.6753-2_6754delAGAG	MACF1	Microsatellite (genic upstream transcript variant)	Malignant tumor of prostate	GUncertain significance
Select item 161857	NM_001024845.3(SLC6A9):c.577G>A (p.Glu193Lys)	SLC6A9 (E266K +6 more)	Single nucleotide variant (missense variant +1 more)	Atypical glycine encephalopathy	GUncertain significance
Select item 161769	NM_024603.4(BEND5):c.1210A>G (p.Ile404Val)	AGBL4, BEND5 (I404V +2 more)	Single nucleotide variant (missense variant +2 more)	Malignant tumor of prostate	GUncertain significance
Select item 161564	NM_153703.5(PODN):c.1060G>T (p.Ala354Ser)	PODN (A354S)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161609	NM_003243.5(TGFBR3):c.2519C>T (p.Thr840Met)	TGFBR3 (T839M +1 more)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 161459	NM_000110.4(DPYD):c.1340-3C>G	DPYD	Single nucleotide variant (intron variant)	Malignant tumor of prostate	GUncertain significance
Select item 161730	NM_020190.5(OLFML3):c.402C>G (p.Asp134Glu)	OLFML3 (D134E +2 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161540	NM_000701.8(ATP1A1):c.464C>T (p.Ser155Leu)	ATP1A1 (S155L +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161497	NM_001025231.3(KPRP):c.743G>A (p.Arg248His)	KPRP (R248H)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 161498	NM_001025231.3(KPRP):c.825T>A (p.Phe275Leu)	KPRP (F275L)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161603	NM_002960.2(S100A3):c.25G>T (p.Val9Leu)	S100A3, LOC101928034 (V9L)	Single nucleotide variant (non-coding transcript variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161766	NM_023015.5(INTS3):c.1700T>C (p.Ile567Thr)	INTS3 (I567T)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161592	NM_002249.6(KCNN3):c.1448+1G>T	KCNN3	Single nucleotide variant (splice donor variant)	Malignant tumor of prostate	GUncertain significance
Select item 161656	NM_007112.5(THBS3):c.1440G>T (p.Gln480His)	THBS3, THBS3-AS1 (Q480H +2 more)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161485	NM_001005279.3(OR6K2):c.947G>T (p.Arg316Ile)	OR6K2 (R316I)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161854	NM_152501.5(PYHIN1):c.602G>A (p.Arg201His)	PYHIN1 (R192H +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161748	NM_001127173.3(CADM3):c.382G>C (p.Gly128Arg)	CADM3 (G162R +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161545	NM_016382.4(CD244):c.971G>A (p.Arg324Lys)	CD244 (R232K +2 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161460	NM_000130.5(F5):c.2127G>A (p.Met709Ile)	F5 (M709I)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161677	NM_014458.4(KLHL20):c.257del (p.Leu86fs)	KLHL20 (L86fs)	Deletion (frameshift variant)	Malignant tumor of prostate	GUncertain significance
Select item 161625	NM_170692.4(RASAL2):c.3820G>T (p.Glu1274Ter)	RASAL2 (E1133* +1 more)	Single nucleotide variant (nonsense)	Malignant tumor of prostate	GUncertain significance
Select item 161777	NM_030933.4(SHCBP1L):c.881C>A (p.Thr294Lys)	SHCBP1L (T294K +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161780	NM_031935.3(HMCN1):c.16792C>T (p.Arg5598Ter)	HMCN1 (R5598*)	Single nucleotide variant (nonsense)	Malignant tumor of prostate	GUncertain significance
Select item 161802	NM_138391.6(TMEM183A):c.708+1G>A	TMEM183A	Single nucleotide variant (splice donor variant)	Malignant tumor of prostate	GUncertain significance
Select item 161476	NM_001684.5(ATP2B4):c.999C>A (p.Asp333Glu)	ATP2B4 (D333E)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161586	NM_001910.4(CTSE):c.319G>A (p.Val107Met)	CTSE (V107M +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161662	NM_012424.6(RPS6KC1):c.3163T>C (p.Phe1055Leu)	RPS6KC1 (F1055L +9 more)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161858	NM_206933.4(USH2A):c.5837G>T (p.Arg1946Leu)	USH2A, USH2A-AS2 (R1946L)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161685	NM_014777.4(URB2):c.1372C>G (p.Gln458Glu)	URB2 (Q458E)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161670	NM_014236.4(GNPAT):c.1935G>C (p.Lys645Asn)	GNPAT (K645N +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161747	NM_021186.5(ZP4):c.214G>A (p.Asp72Asn)	ZP4 (D72N)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161477	NM_001001966.2(OR14A16):c.341C>T (p.Thr114Met)	OR14A16 (T114M)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161776	NM_030904.2(OR2T1):c.-18G>A	OR2T1 (G46S)	Single nucleotide variant (5 prime UTR variant)	Malignant tumor of prostate	GUncertain significance
Select item 161591	NM_002236.5(KCNF1):c.248C>T (p.Pro83Leu)	KCNF1 (P83L)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161855	NM_199191.3(BABAM2):c.626A>G (p.Asp209Gly)	BABAM2 (D209G)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161820	NM_153021.5(PLB1):c.3195+7C>A	PLB1	Single nucleotide variant (intron variant)	Malignant tumor of prostate	GUncertain significance
Select item 161818	NM_152792.4(ASPRV1):c.-158C>T	LOC122757966, ASPRV1 (P32L)	Single nucleotide variant (5 prime UTR variant +1 more)	Inborn genetic diseases	GUncertain significance
Select item 161538	NM_018433.6(KDM3A):c.2685+6TGTT[2]	LOC126806265, KDM3A	Microsatellite (intron variant)	Malignant tumor of prostate	GUncertain significance
Select item 161542	NM_001008949.3(ITPRIPL1):c.1315G>A (p.Ala439Thr)	ITPRIPL1 (A431T +2 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161750	NM_021815.5(SLC5A7):c.1175C>T (p.Ala392Val)	SLC5A7 (A392V +2 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161719	NM_018557.3(LRP1B):c.10187G>C (p.Cys3396Ser)	LRP1B (C3396S)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161720	NM_018557.3(LRP1B):c.6648G>T (p.Glu2216Asp)	LRP1B (E2216D)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161475	NM_000888.5(ITGB6):c.1460G>A (p.Gly487Glu)	ITGB6 (G487E +4 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161758	NM_022168.4(IFIH1):c.816A>C (p.Glu272Asp)	IFIH1 (E272D)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161742	NM_020981.4(B3GALT1):c.543del (p.Phe181fs)	B3GALT1, B3GALT1-AS1 (F181fs)	Deletion (frameshift variant)	Malignant tumor of prostate	GUncertain significance
Select item 161492	NM_013341.5(OLA1):c.787T>G (p.Phe263Val)	OLA1 (F105V +1 more)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161549	NM_001168221.2(C2CD6):c.5255T>C (p.Leu1752Ser)	C2CD6 (L1752S +1 more)	Single nucleotide variant (3 prime UTR variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161861	NM_213589.3(RAPH1):c.1123G>T (p.Glu375Ter)	RAPH1 (E375* +1 more)	Single nucleotide variant (nonsense)	Malignant tumor of prostate	GUncertain significance
Select item 161813	NM_194302.4(CFAP65):c.542+58del	CFAP65 (L136fs)	Deletion (frameshift variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161621	NM_001348323.3(TRIP12):c.850C>A (p.Pro284Thr)	TRIP12 (P242T +1 more)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161638	NM_005683.4(GPR55):c.941C>T (p.Thr314Ile)	GPR55 (T314I)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161701	NM_001385562.1(ARPP21):c.1355G>T (p.Gly452Val)	ARPP21 (G452V +12 more)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161579	NM_001248.4(ENTPD3):c.812T>A (p.Phe271Tyr)	ENTPD3-AS1, ENTPD3 (F271Y)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 17582	NM_001904.4(CTNNB1):c.101G>T (p.Gly34Val)	CTNNB1, LOC126806658 (G34V +1 more)	Single nucleotide variant (missense variant)	Hepatoblastoma +11 more	GConflicting classifications of pathogenicity
Select item 161471	NM_001128840.3(CACNA1D):c.3483del (p.Glu1162fs)	CACNA1D, LOC129936904 (E1182fs +1 more)	Deletion (frameshift variant)	Malignant tumor of prostate	GUncertain significance
Select item 161849	NM_003716.4(CADPS):c.484G>A (p.Ala162Thr)	CADPS (A162T)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161523	NM_001290208.3(ZNF717):c.1228C>G (p.Leu410Val)	ZNF717 (L410V +1 more)	Single nucleotide variant (missense variant +1 more)	not provided	GUncertain significance
Select item 161794	NM_054106.1(OR5AC2):c.730G>A (p.Gly244Ser)	OR5AC2 (G244S)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161700	NM_016247.4(IMPG2):c.1265C>T (p.Pro422Leu)	IMPG2 (P422L)	Single nucleotide variant (missense variant)	Inborn genetic diseases +1 more	GUncertain significance
Select item 161713	NM_018189.4(DPPA4):c.907T>C (p.Trp303Arg)	DPPA4 (W303R +1 more)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161466	NM_000388.4(CASR):c.3121C>T (p.Arg1041Trp)	CASR (R1041W +1 more)	Single nucleotide variant (missense variant)	Familial hypocalciuric hypercalcemia +2 more	GUncertain significance
Select item 161793	NM_053025.4(MYLK):c.1148C>T (p.Pro383Leu)	MYLK (P383L +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161508	NM_001063.4(TF):c.1069G>T (p.Glu357Ter)	TF (E357* +2 more)	Single nucleotide variant (nonsense)	Malignant tumor of prostate	GUncertain significance
Select item 161610	NM_001251845.2(TRPC1):c.970C>T (p.Gln324Ter)	TRPC1 (Q290* +1 more)	Single nucleotide variant (nonsense)	Malignant tumor of prostate	GUncertain significance
Select item 161782	NM_032383.5(HPS3):c.1509+6C>G	HPS3	Single nucleotide variant (intron variant)	Malignant tumor of prostate	GUncertain significance
Select item 161698	NM_015938.5(NMD3):c.503C>T (p.Thr168Ile)	NMD3 (T168I)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161506	NM_001041.4(SI):c.2094C>A (p.Phe698Leu)	SI (F698L)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161841	NM_001366157.1(WDR49):c.2465C>A (p.Ser822Ter)	WDR49 (S470* +2 more)	Single nucleotide variant (nonsense)	Malignant tumor of prostate	GUncertain significance
Select item 161532	NM_005414.5(SKIL):c.942A>T (p.Arg314Ser)	SKIL (R314S +1 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161760	NM_022470.4(ZMAT3):c.182G>A (p.Cys61Tyr)	ZMAT3 (C61Y)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161716	NM_018358.3(ABCF3):c.1327C>T (p.Arg443Trp)	ABCF3 (R443W +3 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161514	NM_003722.5(TP63):c.677G>A (p.Arg226His)	TP63 (R132H +3 more)	Single nucleotide variant (missense variant)	TP63-Related Spectrum Disorders	GUncertain significance
Select item 161526	NM_001136049.3(LMLN):c.1093G>T (p.Gly365Cys)	LMLN (G373C +1 more)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161463	NM_000283.4(PDE6B):c.1401+8_1401+9insA	PDE6B	Insertion (intron variant)	Malignant tumor of prostate	GUncertain significance
Select item 161845	NM_181808.4(POLN):c.2267G>A (p.Arg756Gln)	POLN (R756Q)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161595	NM_002337.4(LRPAP1):c.347A>G (p.Asn116Ser)	LRPAP1 (N116S)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161829	NM_173536.4(GABRG1):c.32C>T (p.Pro11Leu)	GABRG1 (P11L)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161648	NM_006587.4(CORIN):c.1400C>G (p.Pro467Arg)	CORIN (P467R +2 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161809	NM_145263.4(SPATA18):c.991G>A (p.Val331Ile)	SPATA18 (V331I +3 more)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161593	NM_002253.4(KDR):c.2360G>A (p.Arg787Gln)	KDR (R787Q)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161671	NM_014243.3(ADAMTS3):c.64G>T (p.Gly22Ter)	ADAMTS3 (G22*)	Single nucleotide variant (nonsense)	Malignant tumor of prostate	GUncertain significance
Select item 161687	NM_014991.6(WDFY3):c.10260-7C>G	WDFY3	Single nucleotide variant (intron variant)	Malignant tumor of prostate	GUncertain significance
Select item 161688	NM_014991.6(WDFY3):c.2630C>A (p.Ala877Asp)	WDFY3, WDFY3-AS1 (A877D)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161805	NM_138982.4(MAPK10):c.1271G>A (p.Ser424Asn)	MAPK10 (S424N +2 more)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161639	NM_005723.4(TSPAN5):c.268C>A (p.Leu90Ile)	TSPAN5 (L90I)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161569	NM_000325.6(PITX2):c.580G>A (p.Ala194Thr)	PITX2 (A141T +2 more)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161836	NM_018078.4(LARP1B):c.1324G>T (p.Asp442Tyr)	LARP1B (D442Y +1 more)	Single nucleotide variant (missense variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161505	NM_002940.3(ABCE1):c.708T>G (p.Asp236Glu)	ABCE1 (D236E)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161708	NM_001358235.2(DCHS2):c.4375G>A (p.Gly1459Arg)	DCHS2 (G1459R)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161707	NM_017632.4(CDKN2AIP):c.914T>G (p.Leu305Arg)	CDKN2AIP (L305R)	Single nucleotide variant (3 prime UTR variant +1 more)	Malignant tumor of prostate	GUncertain significance
Select item 161839	NM_178556.5(TRIML1):c.1188A>T (p.Lys396Asn)	TRIML1 (K396N)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161792	NM_052909.5(PLEKHG4B):c.2311C>T (p.Arg771Trp)	PLEKHG4B (R771W)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance
Select item 161775	NM_030782.5(CLPTM1L):c.749G>A (p.Arg250His)	CLPTM1L (R250H)	Single nucleotide variant (missense variant)	Malignant tumor of prostate	GUncertain significance

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