| | | Deletion | Autism | |
| | LOC129932391, PIK3C2B +278 more | Deletion | Autism | |
| | | Deletion | Autism | |
| | LOC110121071, LOC126806216 +4 more | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism +1 more | |
| | | Deletion | Autism | |
| | | Duplication | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | LOC123464504, LOC129938307 +114 more | Duplication | Autism | |
| | LOC126807185, LOC129389242 +5 more | Deletion | Autism | |
| | | Duplication | Autism | |
| | | Duplication | Autism | |
| | LOC126859869, LOC126859870 +1 more | Deletion | Autism | |
| | LOC126859869, LOC126859870 +1 more | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Duplication | Autism | |
| | ABHD11, ABHD11-AS1 +128 more | Duplication | Autism | |
| | | Deletion | Autism | |
| | CNTNAP2, LOC123956262 +1 more | Deletion | Autism | |
| | LOC126860233, LOC129999706 +190 more | Deletion | Autism | |
| | | Duplication | Autism | |
| | | Deletion | Autism +1 more | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | LOC129999845, LOC129999846 +1 more | Deletion | Autism | |
| | ALKAL1, LOC126860387 +10 more | Duplication | Autism | |
| | ALKAL1, LOC126860388 +9 more | Duplication | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | CCDC91, LOC124629338 +9 more | Deletion | Autism | |
| | | Deletion | Autism | |
| | LOC109580097, LOC110121346 +5 more | Deletion | Autism | |
| | GABRG3, GABRG3-AS1 +228 more | Duplication | Autism | |
| | | Deletion | Autism +1 more | |
| | LOC112272576, LOC126862074 +20 more | Deletion | Autism | |
| | LOC130056710, LOC130056711 +19 more | Deletion | Autism +1 more | |
| | CYFIP1, LOC112272575 +17 more | Deletion | Autism +1 more | |
| | LOC126862074, LOC130056709 +16 more | Deletion | Autism +1 more | |
| | LOC129390676, SNORD115-38 +151 more | Duplication | Autism | |
| | LOC125078051, LOC125078052 +19 more | Duplication | Autism | |
| | LOC128899998, LOC128899999 +29 more | Deletion | Autism | |
| | LOC106783506, LOC110121498 +29 more | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Duplication | Autism | |
| | LOC130058632, LOC130058633 +35 more | Duplication | Autism | |
| | LOC121847977, LOC130058809 +118 more | Duplication | Autism | |
| | KCTD13, LOC130058798 +112 more | Deletion | Autism | |
| | KCTD13, LOC130058800 +104 more | Duplication | Autism | |
| | LOC121587540, LOC121847976 +99 more | Duplication | Autism +1 more | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | DRC3, LOC130060351 +248 more | Duplication | Autism | |
| | | Deletion | Autism | |
| | | Duplication | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Duplication | Autism | |
| | | Deletion | Autism | |
| | LOC132090561, MACROD2 +1 more | Deletion | Autism | |
| | | Deletion | Autism | |
| | LOC125387247, LOC126863009 +2 more | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | KRTAP10-12, KRTAP10-2 +245 more | Duplication | Autism | |
| | FAM246C, FAM247A +179 more | Duplication | Autism | |
| | | Duplication | Autism | |
| | | Duplication | Autism | |
| | | Deletion | Autism | |
| | | Duplication | Autism +1 more | |
| | | Duplication | Autism | |
| | LOC126863193, LOC126863194 +5 more | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | | Deletion | Autism | |
| | LINC00685, LOC101929148 +160 more | Duplication | Autism | |