ClinVar Genomic variation as it relates to human health
NM_001040142.2(SCN2A):c.788C>T (p.Ala263Val)
The aggregate germline classification for this variant, typically for a monogenic or Mendelian disorder as in the ACMG/AMP guidelines, or for response to a drug. This value is calculated by NCBI based on data from submitters. Read our rules for calculating the aggregate classification.
Stars represent the aggregate review status, or the level of review supporting the aggregate germline classification for this VCV record. This value is calculated by NCBI based on data from submitters. Read our rules for calculating the review status. The number of submissions which contribute to this review status is shown in parentheses.
No data submitted for somatic clinical impact
No data submitted for oncogenicity
Variant Details
- Identifiers
-
NM_001040142.2(SCN2A):c.788C>T (p.Ala263Val)
Variation ID: 29888 Accession: VCV000029888.72
- Type and length
-
single nucleotide variant, 1 bp
- Location
-
Cytogenetic: 2q24.3 2: 165310413 (GRCh38) [ NCBI UCSC ] 2: 166166923 (GRCh37) [ NCBI UCSC ]
- Timeline in ClinVar
-
First in ClinVar Help The date this variant first appeared in ClinVar with each type of classification.
Last submission Help The date of the most recent submission for each type of classification for this variant.
Last evaluated Help The most recent date that a submitter evaluated this variant for each type of classification.
Germline May 17, 2014 Oct 20, 2024 May 3, 2024 - HGVS
-
Nucleotide Protein Molecular
consequenceNM_001040142.2:c.788C>T MANE Select Help Transcripts from the Matched Annotation from the NCBI and EMBL-EBI (MANE) collaboration.
NP_001035232.1:p.Ala263Val missense NM_001371246.1:c.788C>T MANE Plus Clinical Help Transcripts from the Matched Annotation from the NCBI and EMBL-EBI (MANE) collaboration.
NP_001358175.1:p.Ala263Val missense NM_001040143.2:c.788C>T NP_001035233.1:p.Ala263Val missense NM_001371247.1:c.788C>T NP_001358176.1:p.Ala263Val missense NM_021007.3:c.788C>T NP_066287.2:p.Ala263Val missense NC_000002.12:g.165310413C>T NC_000002.11:g.166166923C>T NG_008143.1:g.76012C>T Q99250:p.Ala263Val - Protein change
- A263V
- Other names
-
p.A263V:GCG>GTG
- Canonical SPDI
- NC_000002.12:165310412:C:T
-
Functional
consequence HelpThe effect of the variant on RNA or protein function, based on experimental evidence from submitters.
- -
-
Global minor allele
frequency (GMAF) HelpThe global minor allele frequency calculated by the 1000 Genomes Project. The minor allele at this location is indicated in parentheses and may be different from the allele represented by this VCV record.
- -
-
Allele frequency
Help
The frequency of the allele represented by this VCV record.
- -
- Links
Genes
Gene | OMIM | ClinGen Gene Dosage Sensitivity Curation |
Variation Viewer
Help
Links to Variation Viewer, a genome browser to view variation data from NCBI databases. |
Related variants | ||
---|---|---|---|---|---|---|
HI score
Help
The haploinsufficiency score for the gene, curated by ClinGen’s Dosage Sensitivity Curation task team. |
TS score
Help
The triplosensitivity score for the gene, curated by ClinGen’s Dosage Sensitivity Curation task team. |
Within gene
Help
The number of variants in ClinVar that are contained within this gene, with a link to view the list of variants. |
All
Help
The number of variants in ClinVar for this gene, including smaller variants within the gene and larger CNVs that overlap or fully contain the gene. |
|||
SCN2A | Sufficient evidence for dosage pathogenicity | No evidence available |
GRCh38 GRCh37 |
2612 | 2687 |
Conditions - Germline
Condition
Help
The condition for this variant-condition (RCV) record in ClinVar. |
Classification
Help
The aggregate germline classification for this variant-condition (RCV) record in ClinVar. The number of submissions that contribute to this aggregate classification is shown in parentheses. (# of submissions) |
Review status
Help
The aggregate review status for this variant-condition (RCV) record in ClinVar. This value is calculated by NCBI based on data from submitters. Read our rules for calculating the review status. |
Last evaluated
Help
The most recent date that a submitter evaluated this variant for the condition. |
Variation/condition record
Help
The RCV accession number, with most recent version number, for the variant-condition record, with a link to the RCV web page. |
---|---|---|---|---|
Pathogenic (7) |
criteria provided, multiple submitters, no conflicts
|
May 3, 2024 | RCV000189193.35 | |
Pathogenic (1) |
no assertion criteria provided
|
May 1, 2013 | RCV000022769.30 | |
Pathogenic (3) |
criteria provided, multiple submitters, no conflicts
|
Mar 24, 2023 | RCV000118251.13 | |
Pathogenic (1) |
criteria provided, single submitter
|
Nov 16, 2016 | RCV000416960.3 | |
Pathogenic (1) |
criteria provided, single submitter
|
Nov 8, 2023 | RCV001035869.8 | |
Likely pathogenic (1) |
no assertion criteria provided
|
Apr 25, 2016 | RCV001265272.3 | |
Pathogenic (2) |
criteria provided, single submitter
|
- | RCV001200935.5 | |
Pathogenic (1) |
criteria provided, single submitter
|
- | RCV003155911.3 | |
SCN2A-related disorder
|
Pathogenic (2) |
criteria provided, multiple submitters, no conflicts
|
Mar 29, 2023 | RCV003985263.1 |
Submissions - Germline
Classification
Help
The submitted germline classification for each SCV record. (Last evaluated) |
Review status
Help
Stars represent the review status, or the level of review supporting the submitted (SCV) record. This value is calculated by NCBI based on data from the submitter. Read our rules for calculating the review status. This column also includes a link to the submitter’s assertion criteria if provided, and the collection method. (Assertion criteria) |
Condition
Help
The condition for the classification, provided by the submitter for this submitted (SCV) record. This column also includes the affected status and allele origin of individuals observed with this variant. |
Submitter
Help
The submitting organization for this submitted (SCV) record. This column also includes the SCV accession and version number, the date this SCV first appeared in ClinVar, and the date that this SCV was last updated in ClinVar. |
More information
Help
This column includes more information supporting the classification, including citations, the comment on classification, and detailed evidence provided as observations of the variant by the submitter. |
|
---|---|---|---|---|---|
Pathogenic
(Nov 16, 2016)
|
criteria provided, single submitter
Method: clinical testing
|
Epileptic encephalopathy
Affected status: yes
Allele origin:
de novo
|
Neurogenetics Laboratory - MEYER, AOU Meyer
Accession: SCV000494503.1
First in ClinVar: Feb 12, 2017 Last updated: Feb 12, 2017 |
Family history: no
|
|
Pathogenic
(Nov 12, 2017)
|
criteria provided, single submitter
Method: clinical testing
|
SCN2A-related condition
(Autosomal dominant inheritance)
Affected status: yes
Allele origin:
unknown
|
Undiagnosed Diseases Network, NIH
Study: Undiagnosed Diseases Network (NIH), UDN
Accession: SCV000746601.1 First in ClinVar: Apr 29, 2018 Last updated: Apr 29, 2018 |
Number of individuals with the variant: 1
Clinical Features:
Unsteady gait (present) , Truncal titubation (present) , Seizures (present) , Recurrent upper respiratory tract infections (present) , Primary Caesarian section (present) , Poor speech … (more)
Unsteady gait (present) , Truncal titubation (present) , Seizures (present) , Recurrent upper respiratory tract infections (present) , Primary Caesarian section (present) , Poor speech (present) , Paroxysmal dystonia (present) , Paroxysmal dyskinesia (present) , Nystagmus (present) , Limb tremor (present) , Headache (present) , Episodic ataxia (present) , Dysmetria (present) , Dysarthria (present) , Difficulty walking (present) , Delayed gross motor development (present) , Delayed fine motor development (present) , Cognitive impairment (present) , Caesarian section (present) , Autistic behavior (present) , Abnormal delivery (present) (less)
Age: 10-19 years
Sex: male
Ethnicity/Population group: White
Testing laboratory: Baylor Genetics
Date variant was reported to submitter: 2017-11-12
Testing laboratory interpretation: Pathogenic
|
|
Pathogenic
(-)
|
criteria provided, single submitter
Method: clinical testing
|
Developmental and epileptic encephalopathy, 11
Affected status: yes
Allele origin:
germline
|
Centogene AG - the Rare Disease Company
Accession: SCV001426532.1
First in ClinVar: Aug 09, 2020 Last updated: Aug 09, 2020 |
|
|
Pathogenic
(Jan 19, 2022)
|
criteria provided, single submitter
Method: clinical testing
|
not provided
Affected status: unknown
Allele origin:
unknown
|
Athena Diagnostics
Accession: SCV002771206.1
First in ClinVar: Dec 31, 2022 Last updated: Dec 31, 2022 |
Comment:
This variant has not been reported in large, multi-ethnic general populations (http://gnomad.broadinstitute.org). This variant has been confirmed to occur de novo in multiple individuals with … (more)
This variant has not been reported in large, multi-ethnic general populations (http://gnomad.broadinstitute.org). This variant has been confirmed to occur de novo in multiple individuals with clinical features associated with this gene. Assessment of experimental evidence suggests this variant results in abnormal protein function. In vitro analyses indicate this variant alters sodium channel function (PMID: 20956790). (less)
|
|
Pathogenic
(Mar 29, 2023)
|
criteria provided, single submitter
Method: clinical testing
|
SCN2A-related condition
Affected status: unknown
Allele origin:
germline
|
PreventionGenetics, part of Exact Sciences
Accession: SCV004103295.1
First in ClinVar: Nov 20, 2023 Last updated: Nov 20, 2023 |
Comment:
The SCN2A c.788C>T variant is predicted to result in the amino acid substitution p.Ala263Val. This variant has been reported to be inherited and de novo … (more)
The SCN2A c.788C>T variant is predicted to result in the amino acid substitution p.Ala263Val. This variant has been reported to be inherited and de novo in several individuals with neonatal epilepsy, late-onset ataxia, and/or myoclonus & pain (see for example the index case, Liao et al 2010. PubMed ID: 20956790; and literature reviewed in, Schwarz N et al 2019. PubMed ID: 30928199). These studies and others demonstrate that this variant causes a gain of channel function and occurs in a 'hot-spot' for pathogenic SCN2A variants. This variant has not been reported in a large population database (http://gnomad.broadinstitute.org), indicating it is rare. This variant is interpreted as pathogenic. (less)
|
|
Pathogenic
(Nov 08, 2023)
|
criteria provided, single submitter
Method: clinical testing
|
Seizures, benign familial infantile, 3
Developmental and epileptic encephalopathy, 11
Explanation for multiple conditions: Uncertain.
The variant was classified for several related diseases, possibly a spectrum of disease; the variant may be associated with one or more the diseases.
Affected status: unknown
Allele origin:
germline
|
Labcorp Genetics (formerly Invitae), Labcorp
Accession: SCV001199208.5
First in ClinVar: Apr 15, 2020 Last updated: Feb 28, 2024 |
Comment:
This sequence change replaces alanine, which is neutral and non-polar, with valine, which is neutral and non-polar, at codon 263 of the SCN2A protein (p.Ala263Val). … (more)
This sequence change replaces alanine, which is neutral and non-polar, with valine, which is neutral and non-polar, at codon 263 of the SCN2A protein (p.Ala263Val). This variant is not present in population databases (gnomAD no frequency). This missense change has been observed in individual(s) with SCN2A-related conditions (PMID: 20956790, 26645390, 27159988, 28065826). In at least one individual the variant was observed to be de novo. ClinVar contains an entry for this variant (Variation ID: 29888). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt SCN2A protein function with a positive predictive value of 95%. Experimental studies have shown that this missense change affects SCN2A function (PMID: 20956790). For these reasons, this variant has been classified as Pathogenic. (less)
|
|
Pathogenic
(Aug 06, 2013)
|
criteria provided, single submitter
Method: clinical testing
|
Seizures, benign familial infantile, 3
(Autosomal dominant inheritance)
Affected status: yes
Allele origin:
germline
|
Genetic Services Laboratory, University of Chicago
Accession: SCV000152618.1
First in ClinVar: May 17, 2014 Last updated: May 17, 2014 |
|
|
Pathogenic
(Feb 01, 2021)
|
criteria provided, single submitter
Method: clinical testing
|
not provided
(Autosomal dominant inheritance)
Affected status: yes
Allele origin:
germline
|
Institute of Medical Genetics and Applied Genomics, University Hospital Tübingen
Accession: SCV001480050.1
First in ClinVar: Feb 20, 2021 Last updated: Feb 20, 2021 |
Clinical Features:
Cognitive impairment (present) , Global developmental delay (present) , Seizure (present) , Intellectual disability, profound (present) , Microcephaly (present) , Short stature (present) , Autistic … (more)
Cognitive impairment (present) , Global developmental delay (present) , Seizure (present) , Intellectual disability, profound (present) , Microcephaly (present) , Short stature (present) , Autistic behavior (present) , Absent speech (present) , Reduced eye contact (present) , Aplasia/Hypoplasia of the cerebellum (present) (less)
Sex: female
|
|
Pathogenic
(Jun 03, 2021)
|
criteria provided, single submitter
Method: clinical testing
|
Not provided
Affected status: yes
Allele origin:
de novo
|
AiLife Diagnostics, AiLife Diagnostics
Accession: SCV002502883.1
First in ClinVar: Apr 23, 2022 Last updated: Apr 23, 2022 |
Number of individuals with the variant: 1
Secondary finding: no
|
|
Pathogenic
(-)
|
criteria provided, single submitter
Method: research
|
Infantile spasms
Affected status: yes
Allele origin:
de novo
|
Department of Neurology, Children’s Hospital of Chongqing Medical University
Accession: SCV002577344.1
First in ClinVar: Apr 01, 2023 Last updated: Apr 01, 2023 |
|
|
Pathogenic
(Sep 27, 2022)
|
criteria provided, single submitter
Method: clinical testing
|
Seizures, benign familial infantile, 3
(Autosomal dominant inheritance)
Affected status: yes
Allele origin:
germline
|
Institute for Medical Genetics and Human Genetics, Charité - Universitätsmedizin Berlin
Additional submitter:
CUBI - Core Unit Bioinformatics, Berlin Institute of Health
Accession: SCV002578176.1
First in ClinVar: Oct 08, 2022 Last updated: Oct 08, 2022 |
Clinical Features:
Symptomatic seizures (present)
Sex: female
Tissue: Blood
|
|
Pathogenic
(Mar 24, 2023)
|
criteria provided, single submitter
Method: clinical testing
|
Seizures, benign familial infantile, 3
Affected status: unknown
Allele origin:
unknown
|
Mendelics
Accession: SCV001135993.2
First in ClinVar: Jan 09, 2020 Last updated: Mar 26, 2023 |
|
|
Pathogenic
(May 03, 2024)
|
criteria provided, single submitter
Method: clinical testing
|
Not Provided
Affected status: yes
Allele origin:
germline
|
GeneDx
Accession: SCV000242825.12
First in ClinVar: Aug 07, 2015 Last updated: Sep 16, 2024 |
Comment:
Published functional analysis indicates A263V is a gain-of-function variant leading to neuronal hyperexcitability (PMID: 20956790); Not observed at significant frequency in large population cohorts (gnomAD); … (more)
Published functional analysis indicates A263V is a gain-of-function variant leading to neuronal hyperexcitability (PMID: 20956790); Not observed at significant frequency in large population cohorts (gnomAD); This substitution is predicted to be within the transmembrane segment S5 of the first homologous domain; In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; This variant is associated with the following publications: (PMID: 26283219, 26645390, 24579881, 22029951, 27334371, 28379373, 30361185, 33084218, 32860008, 30928199, 31054490, 32488064, 33000761, 35982159, 32090326, 31440721, 32651551, 31175295, 32139178, 33057194, 36007526, 37432431, 20956790, 23550958, 27159988, 28065826) (less)
|
|
Pathogenic
(Dec 01, 2018)
|
criteria provided, single submitter
Method: clinical testing
|
not provided
Affected status: yes
Allele origin:
germline
|
CeGaT Center for Human Genetics Tuebingen
Accession: SCV001249545.26
First in ClinVar: May 12, 2020 Last updated: Oct 20, 2024 |
Number of individuals with the variant: 3
|
|
Pathogenic
(May 01, 2013)
|
no assertion criteria provided
Method: literature only
|
EPISODIC ATAXIA, TYPE 9
Affected status: not provided
Allele origin:
germline
|
OMIM
Accession: SCV000044058.4
First in ClinVar: Apr 04, 2013 Last updated: Oct 23, 2020 |
Comment on evidence:
Episodic Ataxia Type 9 In an 11-year-old boy with episodic ataxia type 9 (EA9; 618924), Liao et al. (2010) identified a de novo heterozygous c.788C-T … (more)
Episodic Ataxia Type 9 In an 11-year-old boy with episodic ataxia type 9 (EA9; 618924), Liao et al. (2010) identified a de novo heterozygous c.788C-T transition in the SCN2A gene, resulting in an ala263-to-val (A263V) substitution in a highly conserved residue in the S5 segment of transdomain I. The mutation was not found in 93 controls. Electrophysiologic studies showed that the A263V mutation resulted in a 3-fold increase in persistent sodium current, indicating a profound gain of function. Other changes including slowed fast inactivation and accelerated recovery of slow inactivation. These findings were consistent with a gain-of-function effect and neuronal hyperexcitability. Schwarz et al. (2016) reported a boy (patient 3) with EA9 who carried a de novo A263V mutation in the SCN2A gene. In 2 unrelated patients with EA9, Johannesen et al. (2016) and Gorman and King (2017) independently identified a de novo A263V mutation in the SCN2A gene. Functional studies of the variant were not performed. Developmental and Epileptic Encephalopathy 11 Wolff et al. (2017) identified a de novo A263V mutation in a 13-year-old patient (patient 34) with developmental and epileptic encephalopathy-11 (DEE11; 613721). He presented at 3 weeks of age with intractable seizures. He had severely impaired intellectual development and microcephaly. Brain imaging showed atrophy and hypomyelination. He died at 13 years of age. The report expanded the phenotype associated with this mutation. Phenotypic Overlap Touma et al. (2013) reported a pair of monozygotic twin boys who carried the same de novo heterozygous A263V mutation identified in the patient reported by Liao et al. (2010). On the first day of life, both boys developed refractory seizures (up to 60 per day) associated with a burst-suppression pattern on EEG. One twin died on day 19 from iatrogenic cardiopulmonary arrest. The other twin became seizure-free on medication at age 8 months, and seizure-free without medication at age 2 years; this corresponded to improvement of the EEG abnormalities. The surviving twin showed global developmental delay; he could say short sentences but had head lag, axial hypotonia, and inability to crawl. Brain imaging of the surviving twin showed diffuse signal abnormalities in the basal ganglia and brainstem suggestive of cytotoxic edema; these abnormalities improved with age. The phenotype was reminiscent of developmental and epileptic encephalopathy-11 (613721). However, the seizure remission was also consistent with EA9, even though episodic ataxia was not reported. The surviving patient was only 2.5 years of age at the time of the report. (less)
|
|
Pathogenic
(May 01, 2013)
|
no assertion criteria provided
Method: literature only
|
DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 11
Affected status: not provided
Allele origin:
germline
|
OMIM
Accession: SCV001438343.1
First in ClinVar: Oct 23, 2020 Last updated: Oct 23, 2020 |
Comment on evidence:
Episodic Ataxia Type 9 In an 11-year-old boy with episodic ataxia type 9 (EA9; 618924), Liao et al. (2010) identified a de novo heterozygous c.788C-T … (more)
Episodic Ataxia Type 9 In an 11-year-old boy with episodic ataxia type 9 (EA9; 618924), Liao et al. (2010) identified a de novo heterozygous c.788C-T transition in the SCN2A gene, resulting in an ala263-to-val (A263V) substitution in a highly conserved residue in the S5 segment of transdomain I. The mutation was not found in 93 controls. Electrophysiologic studies showed that the A263V mutation resulted in a 3-fold increase in persistent sodium current, indicating a profound gain of function. Other changes including slowed fast inactivation and accelerated recovery of slow inactivation. These findings were consistent with a gain-of-function effect and neuronal hyperexcitability. Schwarz et al. (2016) reported a boy (patient 3) with EA9 who carried a de novo A263V mutation in the SCN2A gene. In 2 unrelated patients with EA9, Johannesen et al. (2016) and Gorman and King (2017) independently identified a de novo A263V mutation in the SCN2A gene. Functional studies of the variant were not performed. Developmental and Epileptic Encephalopathy 11 Wolff et al. (2017) identified a de novo A263V mutation in a 13-year-old patient (patient 34) with developmental and epileptic encephalopathy-11 (DEE11; 613721). He presented at 3 weeks of age with intractable seizures. He had severely impaired intellectual development and microcephaly. Brain imaging showed atrophy and hypomyelination. He died at 13 years of age. The report expanded the phenotype associated with this mutation. Phenotypic Overlap Touma et al. (2013) reported a pair of monozygotic twin boys who carried the same de novo heterozygous A263V mutation identified in the patient reported by Liao et al. (2010). On the first day of life, both boys developed refractory seizures (up to 60 per day) associated with a burst-suppression pattern on EEG. One twin died on day 19 from iatrogenic cardiopulmonary arrest. The other twin became seizure-free on medication at age 8 months, and seizure-free without medication at age 2 years; this corresponded to improvement of the EEG abnormalities. The surviving twin showed global developmental delay; he could say short sentences but had head lag, axial hypotonia, and inability to crawl. Brain imaging of the surviving twin showed diffuse signal abnormalities in the basal ganglia and brainstem suggestive of cytotoxic edema; these abnormalities improved with age. The phenotype was reminiscent of developmental and epileptic encephalopathy-11 (613721). However, the seizure remission was also consistent with EA9, even though episodic ataxia was not reported. The surviving patient was only 2.5 years of age at the time of the report. (less)
|
|
Pathogenic
(-)
|
no assertion criteria provided
Method: clinical testing
|
not provided
Affected status: yes
Allele origin:
germline
|
Genome Diagnostics Laboratory, University Medical Center Utrecht
Additional submitter:
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen
Study: VKGL Data-share Consensus
Accession: SCV001930438.1 First in ClinVar: Sep 24, 2021 Last updated: Sep 24, 2021 |
|
|
Pathogenic
(-)
|
no assertion criteria provided
Method: clinical testing
|
not provided
Affected status: yes
Allele origin:
germline
|
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+
Additional submitter:
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen
Study: VKGL Data-share Consensus
Accession: SCV001958050.1 First in ClinVar: Oct 02, 2021 Last updated: Oct 02, 2021 |
|
|
Likely pathogenic
(Apr 25, 2016)
|
no assertion criteria provided
Method: provider interpretation
|
Complex neurodevelopmental disorder
Affected status: yes
Allele origin:
de novo
|
GenomeConnect - Simons Searchlight
Accession: SCV001443389.1
First in ClinVar: Nov 21, 2020 Last updated: Nov 21, 2020 |
Comment:
Submission from Simons Searchlight facilitated by GenomeConnect. Variant interpreted by the Simons Searchlight team most recently on 2016-04-25 and interpreted as Likely Pathogenic. Variant was … (more)
Submission from Simons Searchlight facilitated by GenomeConnect. Variant interpreted by the Simons Searchlight team most recently on 2016-04-25 and interpreted as Likely Pathogenic. Variant was initially reported on 2014-12-17 by GTR ID of laboratory name 283396. The reporting laboratory might also submit to ClinVar. (less)
Clinical Features:
Neonatal seizure (present) , Abnormality of vision (present) , Myopia (disease) (present) , Seizures (present) , Generalized tonic-clonic seizures (present) , Abnormality of the skin … (more)
Neonatal seizure (present) , Abnormality of vision (present) , Myopia (disease) (present) , Seizures (present) , Generalized tonic-clonic seizures (present) , Abnormality of the skin (present) , Hemangioma (present) , Allergy (present) , Drug allergy (present) , Food allergy (present) (less)
Age: 0-9 years
Sex: female
Testing laboratory: Amplexa Genetics,Amplexa Genetics A/S
Date variant was reported to submitter: 2014-12-17
Testing laboratory interpretation: Likely pathogenic
|
|
click to load more click to collapse |
Germline Functional Evidence
There is no functional evidence in ClinVar for this variation. If you have generated functional data for this variation, please consider submitting that data to ClinVar. |
Citations for germline classification of this variant
HelpTitle | Author | Journal | Year | Link |
---|---|---|---|---|
Successful application of genome sequencing in a diagnostic setting: 1007 index cases from a clinically heterogeneous cohort. | Bertoli-Avella AM | European journal of human genetics : EJHG | 2021 | PMID: 32860008 |
The odyssey of complex neurogenetic disorders: From undetermined to positive. | Salinas V | American journal of medical genetics. Part C, Seminars in medical genetics | 2020 | PMID: 33084218 |
Overrepresentation of genetic variation in the AnkyrinG interactome is related to a range of neurodevelopmental disorders. | van der Werf IM | European journal of human genetics : EJHG | 2020 | PMID: 32651551 |
Overwhelming genetic heterogeneity and exhausting molecular diagnostic process in chronic and progressive ataxias: facing it up with an algorithm, a gene, a panel at a time. | Perez Maturo J | Journal of human genetics | 2020 | PMID: 32488064 |
Targeted gene panel sequencing in early infantile onset developmental and epileptic encephalopathy. | Na JH | Brain & development | 2020 | PMID: 32139178 |
Biological concepts in human sodium channel epilepsies and their relevance in clinical practice. | Brunklaus A | Epilepsia | 2020 | PMID: 32090326 |
Comprehensive analysis of coding variants highlights genetic complexity in developmental and epileptic encephalopathy. | Takata A | Nature communications | 2019 | PMID: 31175295 |
The landscape of early infantile epileptic encephalopathy in a consanguineous population. | Nashabat M | Seizure | 2019 | PMID: 31054490 |
Clinical and genetic spectrum of SCN2A-associated episodic ataxia. | Schwarz N | European journal of paediatric neurology : EJPN : official journal of the European Paediatric Neurology Society | 2019 | PMID: 30928199 |
Lacosamide for SCN2A-related intractable neonatal and infantile seizures. | Flor-Hirsch H | Epileptic disorders : international epilepsy journal with videotape | 2018 | PMID: 30361185 |
Genetic and phenotypic heterogeneity suggest therapeutic implications in SCN2A-related disorders. | Wolff M | Brain : a journal of neurology | 2017 | PMID: 28379373 |
SCN2A p.Ala263Val Variant a Phenotype of Neonatal Seizures Followed by Paroxysmal Ataxia in Toddlers. | Gorman KM | Pediatric neurology | 2017 | PMID: 28065826 |
Mutations in HECW2 are associated with intellectual disability and epilepsy. | Halvardson J | Journal of medical genetics | 2016 | PMID: 27334371 |
Letter to the editor: confirming neonatal seizure and late onset ataxia in SCN2A Ala263Val. | Johannesen KM | Journal of neurology | 2016 | PMID: 27159988 |
Mutations in the sodium channel gene SCN2A cause neonatal epilepsy with late-onset episodic ataxia. | Schwarz N | Journal of neurology | 2016 | PMID: 26645390 |
De Novo Heterogeneous Mutations in SCN2A and GRIN2A Genes and Seizures With Ictal Vocalizations. | Singh D | Clinical pediatrics | 2016 | PMID: 26283219 |
Whole genome sequencing identifies SCN2A mutation in monozygotic twins with Ohtahara syndrome and unique neuropathologic findings. | Touma M | Epilepsia | 2013 | PMID: 23550958 |
SCN2A mutation associated with neonatal epilepsy, late-onset episodic ataxia, myoclonus, and pain. | Liao Y | Neurology | 2010 | PMID: 20956790 |
click to load more click to collapse |
Text-mined citations for rs387906686 ...
HelpRecord last updated Nov 25, 2024
This date represents the last time this VCV record was updated. The update may be due to an update to one of the included submitted records (SCVs), or due to an update that ClinVar made to the variant such as adding HGVS expressions or a rs number. So this date may be different from the date of the “most recent submission” reported at the top of this page.