ClinVar Genomic variation as it relates to human health
NM_004972.4(JAK2):c.1849G>T (p.Val617Phe)
The aggregate germline classification for this variant, typically for a monogenic or Mendelian disorder as in the ACMG/AMP guidelines, or for response to a drug. This value is calculated by NCBI based on data from submitters. Read our rules for calculating the aggregate classification.
Stars represent the aggregate review status, or the level of review supporting the aggregate germline classification for this VCV record. This value is calculated by NCBI based on data from submitters. Read our rules for calculating the review status. The number of submissions which contribute to this review status is shown in parentheses.
No data submitted for somatic clinical impact
No data submitted for oncogenicity
Variant Details
- Identifiers
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NM_004972.4(JAK2):c.1849G>T (p.Val617Phe)
Variation ID: 14662 Accession: VCV000014662.99
- Type and length
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single nucleotide variant, 1 bp
- Location
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Cytogenetic: 9p24.1 9: 5073770 (GRCh38) [ NCBI UCSC ] 9: 5073770 (GRCh37) [ NCBI UCSC ]
- Timeline in ClinVar
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First in ClinVar Help The date this variant first appeared in ClinVar with each type of classification.
Last submission Help The date of the most recent submission for each type of classification for this variant.
Last evaluated Help The most recent date that a submitter evaluated this variant for each type of classification.
Germline Dec 6, 2016 Oct 20, 2024 Sep 6, 2024 - HGVS
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Nucleotide Protein Molecular
consequenceNM_004972.4:c.1849G>T MANE Select Help Transcripts from the Matched Annotation from the NCBI and EMBL-EBI (MANE) collaboration.
NP_004963.1:p.Val617Phe missense NM_001322194.2:c.1849G>T NP_001309123.1:p.Val617Phe missense NM_001322195.2:c.1849G>T NP_001309124.1:p.Val617Phe missense NM_001322196.2:c.1849G>T NP_001309125.1:p.Val617Phe missense NM_001322198.2:c.634G>T NP_001309127.1:p.Val212Phe missense NM_001322199.2:c.634G>T NP_001309128.1:p.Val212Phe missense NM_001322204.2:c.1402G>T NP_001309133.1:p.Val468Phe missense NR_169763.1:n.2333G>T non-coding transcript variant NR_169764.1:n.2250G>T non-coding transcript variant NC_000009.12:g.5073770G>T NC_000009.11:g.5073770G>T NG_009904.1:g.93526G>T NG_046969.1:g.116941C>A LRG_612:g.93526G>T LRG_612t1:c.1849G>T LRG_612p1:p.Val617Phe O60674:p.Val617Phe - Protein change
- V617F, V212F, V468F
- Other names
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- Canonical SPDI
- NC_000009.12:5073769:G:T
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Functional
consequence HelpThe effect of the variant on RNA or protein function, based on experimental evidence from submitters.
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Global minor allele
frequency (GMAF) HelpThe global minor allele frequency calculated by the 1000 Genomes Project. The minor allele at this location is indicated in parentheses and may be different from the allele represented by this VCV record.
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Allele frequency
Help
The frequency of the allele represented by this VCV record.
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The Genome Aggregation Database (gnomAD), exomes 0.00035
The Genome Aggregation Database (gnomAD) 0.00036
Exome Aggregation Consortium (ExAC) 0.00068
- Links
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Genetic Testing Registry (GTR): GTR000558421 Genetic Testing Registry (GTR): GTR000569848 Genetic Testing Registry (GTR): GTR000593854 Genetic Testing Registry (GTR): GTR000593855 Genetic Testing Registry (GTR): GTR000593856 Genetic Testing Registry (GTR): GTR000603933 UniProtKB: O60674#VAR_032697 OMIM: 147796.0001 dbSNP: rs77375493 ClinGen: CA124183 Genetic Testing Registry (GTR): GTR000056468 VarSome
Genes
Gene | OMIM | ClinGen Gene Dosage Sensitivity Curation |
Variation Viewer
Help
Links to Variation Viewer, a genome browser to view variation data from NCBI databases. |
Related variants | ||
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HI score
Help
The haploinsufficiency score for the gene, curated by ClinGen’s Dosage Sensitivity Curation task team. |
TS score
Help
The triplosensitivity score for the gene, curated by ClinGen’s Dosage Sensitivity Curation task team. |
Within gene
Help
The number of variants in ClinVar that are contained within this gene, with a link to view the list of variants. |
All
Help
The number of variants in ClinVar for this gene, including smaller variants within the gene and larger CNVs that overlap or fully contain the gene. |
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INSL6 | - | - |
GRCh38 GRCh37 |
34 | 582 | |
JAK2 | - | - |
GRCh38 GRCh37 |
9 | 562 |
Conditions - Germline
Condition
Help
The condition for this variant-condition (RCV) record in ClinVar. |
Classification
Help
The aggregate germline classification for this variant-condition (RCV) record in ClinVar. The number of submissions that contribute to this aggregate classification is shown in parentheses. (# of submissions) |
Review status
Help
The aggregate review status for this variant-condition (RCV) record in ClinVar. This value is calculated by NCBI based on data from submitters. Read our rules for calculating the review status. |
Last evaluated
Help
The most recent date that a submitter evaluated this variant for the condition. |
Variation/condition record
Help
The RCV accession number, with most recent version number, for the variant-condition record, with a link to the RCV web page. |
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Pathogenic/Likely pathogenic (6) |
criteria provided, multiple submitters, no conflicts
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Sep 2, 2024 | RCV000015769.20 | |
Pathogenic (4) |
criteria provided, multiple submitters, no conflicts
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Nov 24, 2022 | RCV000015770.17 | |
Pathogenic/Likely pathogenic (2) |
no assertion criteria provided
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Oct 2, 2014 | RCV000015771.14 | |
Budd-Chiari syndrome, susceptibility to, somatic
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risk factor (1) |
no assertion criteria provided
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Aug 7, 2014 | RCV000015772.115 |
Likely pathogenic (2) |
criteria provided, single submitter
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Oct 3, 2022 | RCV000022627.16 | |
Affects (1) |
no assertion criteria provided
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Aug 7, 2014 | RCV000022628.14 | |
not provided (1) |
no classification provided
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Mar 10, 2016 | RCV000420273.2 | |
not provided (1) |
no classification provided
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Mar 10, 2016 | RCV000428162.2 | |
Pathogenic/Likely pathogenic (2) |
no assertion criteria provided
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May 13, 2016 | RCV000427081.3 | |
Pathogenic (1) |
no assertion criteria provided
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- | RCV001003804.2 | |
Pathogenic/Likely pathogenic (6) |
criteria provided, multiple submitters, no conflicts
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Sep 6, 2024 | RCV001092995.33 | |
Pathogenic (1) |
criteria provided, single submitter
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Oct 31, 2018 | RCV000763621.3 | |
Likely pathogenic (1) |
no assertion criteria provided
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- | RCV001003803.2 | |
JAK2-related disorder
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Pathogenic (1) |
no assertion criteria provided
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Apr 30, 2024 | RCV004751211.1 |
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Submissions - Germline
Classification
Help
The submitted germline classification for each SCV record. (Last evaluated) |
Review status
Help
Stars represent the review status, or the level of review supporting the submitted (SCV) record. This value is calculated by NCBI based on data from the submitter. Read our rules for calculating the review status. This column also includes a link to the submitter’s assertion criteria if provided, and the collection method. (Assertion criteria) |
Condition
Help
The condition for the classification, provided by the submitter for this submitted (SCV) record. This column also includes the affected status and allele origin of individuals observed with this variant. |
Submitter
Help
The submitting organization for this submitted (SCV) record. This column also includes the SCV accession and version number, the date this SCV first appeared in ClinVar, and the date that this SCV was last updated in ClinVar. |
More information
Help
This column includes more information supporting the classification, including citations, the comment on classification, and detailed evidence provided as observations of the variant by the submitter. |
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Pathogenic
(Feb 08, 2018)
|
criteria provided, single submitter
Method: clinical testing
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Acquired polycythemia vera
Affected status: unknown
Allele origin:
germline
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Human Genome Sequencing Center Clinical Lab, Baylor College of Medicine
Accession: SCV000839961.1
First in ClinVar: Apr 30, 2017 Last updated: Apr 30, 2017 |
Comment:
The c.1849G>T (p.V617F) variant in the JAK2 gene is commonly reported as a somatic change in myeloproliferative neoplasms (MPNs) including polycythemia vera, essential thrombocythemia, primary … (more)
The c.1849G>T (p.V617F) variant in the JAK2 gene is commonly reported as a somatic change in myeloproliferative neoplasms (MPNs) including polycythemia vera, essential thrombocythemia, primary myelofibrosis [PMID: 15781101, 15858187, 15837627, 19074595]. Recently, this variant has also been described as one of the most common drivers of age-related clonal hematopoiesis [PMID: 27563148]. The c.1849G>T (p.V617F) variant in the JAK2 gene is classified as a pathogenic somatic variant. (less)
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Pathogenic
(Oct 31, 2018)
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criteria provided, single submitter
Method: clinical testing
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Primary familial polycythemia due to EPO receptor mutation
Primary myelofibrosis Acquired polycythemia vera Budd-Chiari syndrome Acute myeloid leukemia Thrombocythemia 3
Affected status: unknown
Allele origin:
unknown
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Fulgent Genetics, Fulgent Genetics
Accession: SCV000894475.1
First in ClinVar: Mar 31, 2019 Last updated: Mar 31, 2019 |
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Pathogenic
(Jan 01, 2022)
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criteria provided, single submitter
Method: clinical testing
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Acquired polycythemia vera
Affected status: yes
Allele origin:
somatic
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Provincial Medical Genetics Program of British Columbia, University of British Columbia
Accession: SCV002320869.1
First in ClinVar: Apr 08, 2022 Last updated: Apr 08, 2022 |
Sex: male
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Pathogenic
(Nov 24, 2022)
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criteria provided, single submitter
Method: clinical testing
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Primary myelofibrosis
Affected status: yes
Allele origin:
somatic
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Institute of Human Genetics, University of Leipzig Medical Center
Accession: SCV002765070.1
First in ClinVar: Dec 24, 2022 Last updated: Dec 24, 2022 |
Comment:
_x000D_ Criteria applied: PS3, PS4, PM1, PM5, PP4
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Pathogenic
(Sep 06, 2024)
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criteria provided, single submitter
Method: clinical testing
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Not Provided
Affected status: yes
Allele origin:
germline
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GeneDx
Accession: SCV001825403.5
First in ClinVar: Sep 08, 2021 Last updated: Oct 08, 2024 |
Comment:
In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; This variant is associated with the following publications: (PMID: 23425079, … (more)
In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; This variant is associated with the following publications: (PMID: 23425079, 25698270, 21120162, 21689158, 27777768, 28205126, 24381227, 16755940, 16293597, 29349042, 31721094, 28596259, 29641446, 23300178, 16156870, 16871278, 20182460, 24068492, 15781101, 19287384, 25157968, 24986690, 16081687, 16709929, 18394554, 24404189, 20339092, 22571758, 20631743, 23115274, 22818858, 22041374, 22829971, 22422826, 21160067, 19549988, 16341032, 26228487, 23537216, 23248577, 23057517, 19195039, 17596137, 17440677, 17194663, 16990759, 16904848, 16954506, 16926301, 15920007, 15858187, 15860661, 26556299, 19293426, 16762626, 15793561, 30944118, 33144682, 32581362, 31447099, 19327411, 27389715, 35861108, 37885353, 35150601) (less)
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Pathogenic
(Aug 30, 2021)
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criteria provided, single submitter
Method: clinical testing
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Primary myelofibrosis
Affected status: unknown
Allele origin:
unknown
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Baylor Genetics
Accession: SCV003835086.1
First in ClinVar: Mar 11, 2023 Last updated: Mar 11, 2023 |
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Likely pathogenic
(Oct 03, 2022)
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criteria provided, single submitter
Method: clinical testing
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Thrombocythemia 3
Affected status: unknown
Allele origin:
germline
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Revvity Omics, Revvity
Accession: SCV003831788.2
First in ClinVar: Mar 04, 2023 Last updated: Feb 04, 2024 |
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Likely pathogenic
(Jan 20, 2024)
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criteria provided, single submitter
Method: clinical testing
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not provided
Affected status: unknown
Allele origin:
germline
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Labcorp Genetics (formerly Invitae), Labcorp
Accession: SCV002307245.3
First in ClinVar: Mar 28, 2022 Last updated: Feb 14, 2024 |
Comment:
This sequence change replaces valine, which is neutral and non-polar, with phenylalanine, which is neutral and non-polar, at codon 617 of the JAK2 protein (p.Val617Phe). … (more)
This sequence change replaces valine, which is neutral and non-polar, with phenylalanine, which is neutral and non-polar, at codon 617 of the JAK2 protein (p.Val617Phe). The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the gnomAD database. This variant is a well-known somatic change that has been reported as a recurrent variant in many individuals affected with myeloproliferative disorders (PMID: 15920007, 15781101, 15858187, 15793561, 16603627). ClinVar contains an entry for this variant (Variation ID: 14662). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt JAK2 protein function with a negative predictive value of 80%. Experimental studies have shown that this missense change affects JAK2 function (PMID: 15793561, 23535062). A different missense substitution at this codon (p.Val617Ile) has been reported to segregate with autosomal dominant hereditary thrombocytosis as a germline change in a single family (PMID: 22397670). Functional studies show that this variant results in constitutive kinase activation and cytokine hyper-responsiveness (PMID: 23535062, 22397670). In summary, the currently available evidence indicates that the variant is pathogenic, but additional data are needed to prove that conclusively. Therefore, this variant has been classified as Likely Pathogenic. (less)
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Likely pathogenic
(Sep 02, 2024)
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criteria provided, single submitter
Method: clinical testing
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Acquired polycythemia vera
Affected status: unknown
Allele origin:
germline
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Center for Genomic Medicine, King Faisal Specialist Hospital and Research Center
Accession: SCV004806756.2
First in ClinVar: Apr 06, 2024 Last updated: Sep 16, 2024 |
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Pathogenic
(Feb 26, 2024)
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criteria provided, single submitter
Method: clinical testing
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not provided
Affected status: yes
Allele origin:
germline
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Centre for Clinical Genetics and Genomic Diagnostics, Zealand University Hospital
Accession: SCV005328481.1
First in ClinVar: Oct 08, 2024 Last updated: Oct 08, 2024 |
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Pathogenic
(Aug 01, 2024)
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criteria provided, single submitter
Method: clinical testing
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not provided
Affected status: yes
Allele origin:
germline
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CeGaT Center for Human Genetics Tuebingen
Accession: SCV001249759.24
First in ClinVar: May 12, 2020 Last updated: Oct 20, 2024 |
Comment:
JAK2: PM1, PM5, PM6, PS4:Moderate, PP4, PS3:Supporting
Number of individuals with the variant: 12
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Likely pathogenic
(May 13, 2016)
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no assertion criteria provided
Method: literature only
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Myeloproliferative disorder
(Somatic mutation)
Affected status: yes
Allele origin:
somatic
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Database of Curated Mutations (DoCM)
Accession: SCV000504653.1
First in ClinVar: Mar 08, 2017 Last updated: Mar 08, 2017 |
|
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Likely pathogenic
(Jul 14, 2015)
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no assertion criteria provided
Method: literature only
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Primary myelofibrosis
(Somatic mutation)
Affected status: yes
Allele origin:
somatic
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Database of Curated Mutations (DoCM)
Accession: SCV000504655.1
First in ClinVar: Mar 08, 2017 Last updated: Mar 08, 2017 |
|
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Likely pathogenic
(Oct 02, 2014)
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no assertion criteria provided
Method: literature only
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Acute myeloid leukemia
(Somatic mutation)
Affected status: yes
Allele origin:
somatic
|
Database of Curated Mutations (DoCM)
Accession: SCV000504656.1
First in ClinVar: Mar 08, 2017 Last updated: Mar 08, 2017 |
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Pathogenic
(-)
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no assertion criteria provided
Method: clinical testing
|
not provided
Affected status: yes
Allele origin:
germline
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Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+
Additional submitter:
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen
Study: VKGL Data-share Consensus
Accession: SCV002037447.1 First in ClinVar: Dec 18, 2021 Last updated: Dec 18, 2021 |
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Pathogenic
(Aug 07, 2014)
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no assertion criteria provided
Method: literature only
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POLYCYTHEMIA VERA, SOMATIC
Affected status: not provided
Allele origin:
somatic
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OMIM
Accession: SCV000036034.9
First in ClinVar: Apr 04, 2013 Last updated: Oct 21, 2023 |
Comment on evidence:
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; … (more)
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; 614521), and 8 (50%) of 16 with idiopathic myelofibrosis (254450), Baxter et al. (2005) identified a somatic G-to-T transversion in the JAK2 gene, resulting in a val617-to-phe (V617F) substitution in the negative regulatory JH2 domain. The mutation was predicted to dysregulate kinase activity. It was heterozygous in most patients, homozygous in a subset as the result of mitotic recombination, and arose in a multipotent progenitor capable of giving rise to erythroid and myeloid cells. In all 51 patients with loss-of-heterozygosity (LOH) of chromosome 9p, Kralovics et al. (2005) identified a somatic V617F mutation. Of 193 patients without 9p LOH, 66 were heterozygous for V617F and 127 did not have the mutation. The frequency of V617F was 65% (83 of 128) among patients with polycythemia vera, 57% (13 of 23) among patients with idiopathic myelofibrosis, and 23% (21 of 93) among patients with essential thrombocythemia. James et al. (2005) identified a somatic V617F mutation in 40 of 45 patients with polycythemia vera. They found that the mutation leads to constitutive tyrosine phosphorylation activity that promotes cytokine hypersensitivity and induces erythrocytosis in a mouse model. Jamieson et al. (2006) identified the V617F mutation in peripheral blood and bone marrow cells in 14 of 16 PV patients. In all PV peripheral blood samples analyzed, there were increased numbers of hematopoietic stem cells compared to controls. The V617F mutation was detected in hematopoietic stem cells of all 6 PV samples examined further, and those stem cells showed skewed differentiation towards the erythroid lineage. However, the mutation was also identified in most myeloid precursor cells examined, indicating that the mutation was clonally transmitted to all stem cell progeny. Aberrant erythroid potential of PV stem cells was potently inhibited by the JAK2 inhibitor AG490. An acquired V617F mutation in JAK2 occurs in most patients with polycythemia vera, but is seen in only half those with essential thrombocythemia and idiopathic myelofibrosis. Campbell et al. (2005) attempted to determine whether essential thrombocythemia patients with the mutation are biologically distinct from those without, and why the same mutation is associated with different disease phenotypes. The mutation-positive patients had lower serum erythropoietin and ferritin concentrations than did mutation-negative patients. Mutation-negative patients did, nonetheless, show many clinical and laboratory features characteristic of a myeloproliferative disorder. These V617F-positive individuals were more sensitive to therapy with hydroxyurea, but not anagrelide, than those without the JAK2 mutation. Thus, Campbell et al. (2005) concluded that V617F-positive essential thrombocythemia and polycythemia vera form a biologic continuum, with the degree of erythrocytosis determined by physiologic or genetic modifiers. Most patients with myeloproliferative neoplasms (MPNs) like myelofibrosis have the acquired V617F mutation of JAK2 in hematopoietic stem cells (HSCs), which renders the kinase constitutively active, leading to uncontrolled cell expansion. Mendez-Ferrer et al. (2008) and Mendez-Ferrer et al. (2010) showed that bone marrow nestin (NES; 600915)-positive mesenchymal stem cells (MSCs) innervated by sympathetic nerve fibers regulate normal HSCs. Arranz et al. (2014) demonstrated that abrogation of this regulatory circuit is essential for MPN pathogenesis. Sympathetic nerve fibers, supporting Schwann cells and nestin-positive MSCs, were consistently reduced in the bone marrow of MPN patients and mice expressing the human V617F mutation in the JAK2 gene in HSCs. Unexpectedly, MSC reduction was not due to differentiation but to bone marrow neural damage and Schwann cell death triggered by IL1B (147720) produced by mutant HSCs. In turn, in vivo depletion of nestin-positive cells or their production of CXCL12 (600835) expanded mutant HSC number and accelerated MPN progression. In contrast, administration of neuroprotective or sympathomimetic drugs prevented mutant HSC expansion. Treatment with beta-3-adrenergic agonists that restored the sympathetic regulation of nestin-positive MSCs prevented the loss of these cells and blocked MPN progression by indirectly reducing the number of leukemic stem cells. Arranz et al. (2014) concluded that their results demonstrated that mutant HSC-driven niche damage critically contributes to disease manifestations in MPNs, and identified niche-forming MSCs and their neural regulation as therapeutic targets. Ortmann et al. (2015) determined mutation order in patients with myeloproliferative neoplasms by genotyping hematopoietic colonies or by means of next-generation sequencing. Stem cells and progenitor cells were isolated to study the effect of mutation order on mature and immature hematopoietic cells. The age at which a patient presented with a myeloproliferative neoplasm, acquisition of JAK2 V617F homozygosity, and the balance of immature progenitors were all influenced by mutation order. As compared with patients in whom the TET2 (612839) mutation was acquired first (hereafter referred to as 'TET2-first patients'), patients in whom the JAK2 mutation was acquired first (JAK2-first patients) had a greater likelihood of presenting with polycythemia vera (263300) than with essential thrombocythemia, an increased risk of thrombosis, and an increased sensitivity of JAK2-mutant progenitors to ruxolitinib in vitro. Mutation order influenced the proliferative response to JAK2 V617F and the capacity of double-mutant hematopoietic cells and progenitor cells to generate colony-forming cells. Moreover, the hematopoietic stem-and-progenitor-cell compartment was dominated by TET2 single-mutant cells in TET2-first patients but by JAK2-TET2 double-mutant cells in JAK2-first patients. Prior mutation of TET2 altered the transcriptional consequences of JAK2 V617F in a cell-intrinsic manner and prevented JAK2 V617F from upregulating genes associated with proliferation. Ortmann et al. (2015) concluded that the order in which JAK2 and TET2 mutations were acquired influenced clinical features, the response to targeted therapy, the biology of stem and progenitor cells, and clonal evolution in patients with myeloproliferative neoplasms. Acute Myelogeneous Leukemia Lee et al. (2006) identified heterozygosity for the V617F mutation in bone marrow aspirates from 2 of 113 patients with acute myelogenous leukemia (AML; 601626). Neither patient had a history of previous hematologic disorders and or evidence of erythroid lineage proliferation on bone marrow biopsy. Susceptibility to Pregnancy Loss Mercier et al. (2007) screened for the JAK2 V617F mutation in 3,496 pairs of women enrolled in a matched case-control study of unexplained pregnancy loss (see RPRGL1, 614389) and found that the mutation was significantly associated with the risk of fetal loss (OR, 4.63; p = 0.002) and embryonic loss (OR, 7.20; p = 0.009). The mutation was more frequent in women with embryonic loss than in those with fetal loss (p less than 0.001); clinical examination and complete blood count were normal in all women with the mutation. The increased risks were independent of those associated with the 1691A mutation in the factor V Leiden gene (612309.0001) and the 20210A mutation in the prothrombin gene (176930.0009). Dahabreh et al. (2008) screened 389 women with a history of at least 3 consecutive early or 1 late pregnancy loss but did not find the JAK2 V617F mutation in any case; the authors concluded that latent maternal JAK2 V617F-positive myeloproliferative neoplasm is an unlikely cause of miscarriage. Budd-Chiari Syndrome Chung et al. (2006) described Budd-Chiari syndrome (600880) in a 46-year-old woman who was well until the onset of increasing abdominal distention over a period of several days. She was found to have a combination of the V617F mutation and the factor V Leiden mutation (612309.0001). This somatic JAK2 mutation was found by Patel et al. (2006) in a high proportion of patients with the Budd-Chiari syndrome, providing evidence that these patients have a latent myeloproliferative disorder. Sozer et al. (2009) identified somatic homozygous V617F mutations in liver venule endothelial and hematopoietic cells from 2 unrelated PV patients who developed Budd-Chiari syndrome. However, analysis of endothelial cells from a third PV patient with Budd-Chiari syndrome and in 2 patients with hepatoportal sclerosis without PV showed only wildtype JAK2. Endothelial and hematopoietic cells are believed to come from a common progenitor called the hemangioblast. Sozer et al. (2009) concluded that finding V617F-positive endothelial cells and hematopoietic cells from patients with PV who developed Budd-Chiari syndrome indicates that endothelial cells are involved by the PV malignant process, and suggested that the disease might originate from a common cell of origin in some patients. (less)
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Pathogenic
(Aug 07, 2014)
|
no assertion criteria provided
Method: literature only
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LEUKEMIA, ACUTE MYELOGENOUS, SOMATIC
Affected status: not provided
Allele origin:
somatic
|
OMIM
Accession: SCV000036037.9
First in ClinVar: Apr 04, 2013 Last updated: Oct 21, 2023 |
Comment on evidence:
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; … (more)
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; 614521), and 8 (50%) of 16 with idiopathic myelofibrosis (254450), Baxter et al. (2005) identified a somatic G-to-T transversion in the JAK2 gene, resulting in a val617-to-phe (V617F) substitution in the negative regulatory JH2 domain. The mutation was predicted to dysregulate kinase activity. It was heterozygous in most patients, homozygous in a subset as the result of mitotic recombination, and arose in a multipotent progenitor capable of giving rise to erythroid and myeloid cells. In all 51 patients with loss-of-heterozygosity (LOH) of chromosome 9p, Kralovics et al. (2005) identified a somatic V617F mutation. Of 193 patients without 9p LOH, 66 were heterozygous for V617F and 127 did not have the mutation. The frequency of V617F was 65% (83 of 128) among patients with polycythemia vera, 57% (13 of 23) among patients with idiopathic myelofibrosis, and 23% (21 of 93) among patients with essential thrombocythemia. James et al. (2005) identified a somatic V617F mutation in 40 of 45 patients with polycythemia vera. They found that the mutation leads to constitutive tyrosine phosphorylation activity that promotes cytokine hypersensitivity and induces erythrocytosis in a mouse model. Jamieson et al. (2006) identified the V617F mutation in peripheral blood and bone marrow cells in 14 of 16 PV patients. In all PV peripheral blood samples analyzed, there were increased numbers of hematopoietic stem cells compared to controls. The V617F mutation was detected in hematopoietic stem cells of all 6 PV samples examined further, and those stem cells showed skewed differentiation towards the erythroid lineage. However, the mutation was also identified in most myeloid precursor cells examined, indicating that the mutation was clonally transmitted to all stem cell progeny. Aberrant erythroid potential of PV stem cells was potently inhibited by the JAK2 inhibitor AG490. An acquired V617F mutation in JAK2 occurs in most patients with polycythemia vera, but is seen in only half those with essential thrombocythemia and idiopathic myelofibrosis. Campbell et al. (2005) attempted to determine whether essential thrombocythemia patients with the mutation are biologically distinct from those without, and why the same mutation is associated with different disease phenotypes. The mutation-positive patients had lower serum erythropoietin and ferritin concentrations than did mutation-negative patients. Mutation-negative patients did, nonetheless, show many clinical and laboratory features characteristic of a myeloproliferative disorder. These V617F-positive individuals were more sensitive to therapy with hydroxyurea, but not anagrelide, than those without the JAK2 mutation. Thus, Campbell et al. (2005) concluded that V617F-positive essential thrombocythemia and polycythemia vera form a biologic continuum, with the degree of erythrocytosis determined by physiologic or genetic modifiers. Most patients with myeloproliferative neoplasms (MPNs) like myelofibrosis have the acquired V617F mutation of JAK2 in hematopoietic stem cells (HSCs), which renders the kinase constitutively active, leading to uncontrolled cell expansion. Mendez-Ferrer et al. (2008) and Mendez-Ferrer et al. (2010) showed that bone marrow nestin (NES; 600915)-positive mesenchymal stem cells (MSCs) innervated by sympathetic nerve fibers regulate normal HSCs. Arranz et al. (2014) demonstrated that abrogation of this regulatory circuit is essential for MPN pathogenesis. Sympathetic nerve fibers, supporting Schwann cells and nestin-positive MSCs, were consistently reduced in the bone marrow of MPN patients and mice expressing the human V617F mutation in the JAK2 gene in HSCs. Unexpectedly, MSC reduction was not due to differentiation but to bone marrow neural damage and Schwann cell death triggered by IL1B (147720) produced by mutant HSCs. In turn, in vivo depletion of nestin-positive cells or their production of CXCL12 (600835) expanded mutant HSC number and accelerated MPN progression. In contrast, administration of neuroprotective or sympathomimetic drugs prevented mutant HSC expansion. Treatment with beta-3-adrenergic agonists that restored the sympathetic regulation of nestin-positive MSCs prevented the loss of these cells and blocked MPN progression by indirectly reducing the number of leukemic stem cells. Arranz et al. (2014) concluded that their results demonstrated that mutant HSC-driven niche damage critically contributes to disease manifestations in MPNs, and identified niche-forming MSCs and their neural regulation as therapeutic targets. Ortmann et al. (2015) determined mutation order in patients with myeloproliferative neoplasms by genotyping hematopoietic colonies or by means of next-generation sequencing. Stem cells and progenitor cells were isolated to study the effect of mutation order on mature and immature hematopoietic cells. The age at which a patient presented with a myeloproliferative neoplasm, acquisition of JAK2 V617F homozygosity, and the balance of immature progenitors were all influenced by mutation order. As compared with patients in whom the TET2 (612839) mutation was acquired first (hereafter referred to as 'TET2-first patients'), patients in whom the JAK2 mutation was acquired first (JAK2-first patients) had a greater likelihood of presenting with polycythemia vera (263300) than with essential thrombocythemia, an increased risk of thrombosis, and an increased sensitivity of JAK2-mutant progenitors to ruxolitinib in vitro. Mutation order influenced the proliferative response to JAK2 V617F and the capacity of double-mutant hematopoietic cells and progenitor cells to generate colony-forming cells. Moreover, the hematopoietic stem-and-progenitor-cell compartment was dominated by TET2 single-mutant cells in TET2-first patients but by JAK2-TET2 double-mutant cells in JAK2-first patients. Prior mutation of TET2 altered the transcriptional consequences of JAK2 V617F in a cell-intrinsic manner and prevented JAK2 V617F from upregulating genes associated with proliferation. Ortmann et al. (2015) concluded that the order in which JAK2 and TET2 mutations were acquired influenced clinical features, the response to targeted therapy, the biology of stem and progenitor cells, and clonal evolution in patients with myeloproliferative neoplasms. Acute Myelogeneous Leukemia Lee et al. (2006) identified heterozygosity for the V617F mutation in bone marrow aspirates from 2 of 113 patients with acute myelogenous leukemia (AML; 601626). Neither patient had a history of previous hematologic disorders and or evidence of erythroid lineage proliferation on bone marrow biopsy. Susceptibility to Pregnancy Loss Mercier et al. (2007) screened for the JAK2 V617F mutation in 3,496 pairs of women enrolled in a matched case-control study of unexplained pregnancy loss (see RPRGL1, 614389) and found that the mutation was significantly associated with the risk of fetal loss (OR, 4.63; p = 0.002) and embryonic loss (OR, 7.20; p = 0.009). The mutation was more frequent in women with embryonic loss than in those with fetal loss (p less than 0.001); clinical examination and complete blood count were normal in all women with the mutation. The increased risks were independent of those associated with the 1691A mutation in the factor V Leiden gene (612309.0001) and the 20210A mutation in the prothrombin gene (176930.0009). Dahabreh et al. (2008) screened 389 women with a history of at least 3 consecutive early or 1 late pregnancy loss but did not find the JAK2 V617F mutation in any case; the authors concluded that latent maternal JAK2 V617F-positive myeloproliferative neoplasm is an unlikely cause of miscarriage. Budd-Chiari Syndrome Chung et al. (2006) described Budd-Chiari syndrome (600880) in a 46-year-old woman who was well until the onset of increasing abdominal distention over a period of several days. She was found to have a combination of the V617F mutation and the factor V Leiden mutation (612309.0001). This somatic JAK2 mutation was found by Patel et al. (2006) in a high proportion of patients with the Budd-Chiari syndrome, providing evidence that these patients have a latent myeloproliferative disorder. Sozer et al. (2009) identified somatic homozygous V617F mutations in liver venule endothelial and hematopoietic cells from 2 unrelated PV patients who developed Budd-Chiari syndrome. However, analysis of endothelial cells from a third PV patient with Budd-Chiari syndrome and in 2 patients with hepatoportal sclerosis without PV showed only wildtype JAK2. Endothelial and hematopoietic cells are believed to come from a common progenitor called the hemangioblast. Sozer et al. (2009) concluded that finding V617F-positive endothelial cells and hematopoietic cells from patients with PV who developed Budd-Chiari syndrome indicates that endothelial cells are involved by the PV malignant process, and suggested that the disease might originate from a common cell of origin in some patients. (less)
|
|
risk factor
(Aug 07, 2014)
|
no assertion criteria provided
Method: literature only
|
BUDD-CHIARI SYNDROME, SUSCEPTIBILITY TO, SOMATIC
Affected status: not provided
Allele origin:
somatic
|
OMIM
Accession: SCV000036038.55
First in ClinVar: Apr 04, 2013 Last updated: Jan 06, 2024 |
Comment on evidence:
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; … (more)
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; 614521), and 8 (50%) of 16 with idiopathic myelofibrosis (254450), Baxter et al. (2005) identified a somatic G-to-T transversion in the JAK2 gene, resulting in a val617-to-phe (V617F) substitution in the negative regulatory JH2 domain. The mutation was predicted to dysregulate kinase activity. It was heterozygous in most patients, homozygous in a subset as the result of mitotic recombination, and arose in a multipotent progenitor capable of giving rise to erythroid and myeloid cells. In all 51 patients with loss-of-heterozygosity (LOH) of chromosome 9p, Kralovics et al. (2005) identified a somatic V617F mutation. Of 193 patients without 9p LOH, 66 were heterozygous for V617F and 127 did not have the mutation. The frequency of V617F was 65% (83 of 128) among patients with polycythemia vera, 57% (13 of 23) among patients with idiopathic myelofibrosis, and 23% (21 of 93) among patients with essential thrombocythemia. James et al. (2005) identified a somatic V617F mutation in 40 of 45 patients with polycythemia vera. They found that the mutation leads to constitutive tyrosine phosphorylation activity that promotes cytokine hypersensitivity and induces erythrocytosis in a mouse model. Jamieson et al. (2006) identified the V617F mutation in peripheral blood and bone marrow cells in 14 of 16 PV patients. In all PV peripheral blood samples analyzed, there were increased numbers of hematopoietic stem cells compared to controls. The V617F mutation was detected in hematopoietic stem cells of all 6 PV samples examined further, and those stem cells showed skewed differentiation towards the erythroid lineage. However, the mutation was also identified in most myeloid precursor cells examined, indicating that the mutation was clonally transmitted to all stem cell progeny. Aberrant erythroid potential of PV stem cells was potently inhibited by the JAK2 inhibitor AG490. An acquired V617F mutation in JAK2 occurs in most patients with polycythemia vera, but is seen in only half those with essential thrombocythemia and idiopathic myelofibrosis. Campbell et al. (2005) attempted to determine whether essential thrombocythemia patients with the mutation are biologically distinct from those without, and why the same mutation is associated with different disease phenotypes. The mutation-positive patients had lower serum erythropoietin and ferritin concentrations than did mutation-negative patients. Mutation-negative patients did, nonetheless, show many clinical and laboratory features characteristic of a myeloproliferative disorder. These V617F-positive individuals were more sensitive to therapy with hydroxyurea, but not anagrelide, than those without the JAK2 mutation. Thus, Campbell et al. (2005) concluded that V617F-positive essential thrombocythemia and polycythemia vera form a biologic continuum, with the degree of erythrocytosis determined by physiologic or genetic modifiers. Most patients with myeloproliferative neoplasms (MPNs) like myelofibrosis have the acquired V617F mutation of JAK2 in hematopoietic stem cells (HSCs), which renders the kinase constitutively active, leading to uncontrolled cell expansion. Mendez-Ferrer et al. (2008) and Mendez-Ferrer et al. (2010) showed that bone marrow nestin (NES; 600915)-positive mesenchymal stem cells (MSCs) innervated by sympathetic nerve fibers regulate normal HSCs. Arranz et al. (2014) demonstrated that abrogation of this regulatory circuit is essential for MPN pathogenesis. Sympathetic nerve fibers, supporting Schwann cells and nestin-positive MSCs, were consistently reduced in the bone marrow of MPN patients and mice expressing the human V617F mutation in the JAK2 gene in HSCs. Unexpectedly, MSC reduction was not due to differentiation but to bone marrow neural damage and Schwann cell death triggered by IL1B (147720) produced by mutant HSCs. In turn, in vivo depletion of nestin-positive cells or their production of CXCL12 (600835) expanded mutant HSC number and accelerated MPN progression. In contrast, administration of neuroprotective or sympathomimetic drugs prevented mutant HSC expansion. Treatment with beta-3-adrenergic agonists that restored the sympathetic regulation of nestin-positive MSCs prevented the loss of these cells and blocked MPN progression by indirectly reducing the number of leukemic stem cells. Arranz et al. (2014) concluded that their results demonstrated that mutant HSC-driven niche damage critically contributes to disease manifestations in MPNs, and identified niche-forming MSCs and their neural regulation as therapeutic targets. Ortmann et al. (2015) determined mutation order in patients with myeloproliferative neoplasms by genotyping hematopoietic colonies or by means of next-generation sequencing. Stem cells and progenitor cells were isolated to study the effect of mutation order on mature and immature hematopoietic cells. The age at which a patient presented with a myeloproliferative neoplasm, acquisition of JAK2 V617F homozygosity, and the balance of immature progenitors were all influenced by mutation order. As compared with patients in whom the TET2 (612839) mutation was acquired first (hereafter referred to as 'TET2-first patients'), patients in whom the JAK2 mutation was acquired first (JAK2-first patients) had a greater likelihood of presenting with polycythemia vera (263300) than with essential thrombocythemia, an increased risk of thrombosis, and an increased sensitivity of JAK2-mutant progenitors to ruxolitinib in vitro. Mutation order influenced the proliferative response to JAK2 V617F and the capacity of double-mutant hematopoietic cells and progenitor cells to generate colony-forming cells. Moreover, the hematopoietic stem-and-progenitor-cell compartment was dominated by TET2 single-mutant cells in TET2-first patients but by JAK2-TET2 double-mutant cells in JAK2-first patients. Prior mutation of TET2 altered the transcriptional consequences of JAK2 V617F in a cell-intrinsic manner and prevented JAK2 V617F from upregulating genes associated with proliferation. Ortmann et al. (2015) concluded that the order in which JAK2 and TET2 mutations were acquired influenced clinical features, the response to targeted therapy, the biology of stem and progenitor cells, and clonal evolution in patients with myeloproliferative neoplasms. Acute Myelogeneous Leukemia Lee et al. (2006) identified heterozygosity for the V617F mutation in bone marrow aspirates from 2 of 113 patients with acute myelogenous leukemia (AML; 601626). Neither patient had a history of previous hematologic disorders and or evidence of erythroid lineage proliferation on bone marrow biopsy. Susceptibility to Pregnancy Loss Mercier et al. (2007) screened for the JAK2 V617F mutation in 3,496 pairs of women enrolled in a matched case-control study of unexplained pregnancy loss (see RPRGL1, 614389) and found that the mutation was significantly associated with the risk of fetal loss (OR, 4.63; p = 0.002) and embryonic loss (OR, 7.20; p = 0.009). The mutation was more frequent in women with embryonic loss than in those with fetal loss (p less than 0.001); clinical examination and complete blood count were normal in all women with the mutation. The increased risks were independent of those associated with the 1691A mutation in the factor V Leiden gene (612309.0001) and the 20210A mutation in the prothrombin gene (176930.0009). Dahabreh et al. (2008) screened 389 women with a history of at least 3 consecutive early or 1 late pregnancy loss but did not find the JAK2 V617F mutation in any case; the authors concluded that latent maternal JAK2 V617F-positive myeloproliferative neoplasm is an unlikely cause of miscarriage. Budd-Chiari Syndrome Chung et al. (2006) described Budd-Chiari syndrome (600880) in a 46-year-old woman who was well until the onset of increasing abdominal distention over a period of several days. She was found to have a combination of the V617F mutation and the factor V Leiden mutation (612309.0001). This somatic JAK2 mutation was found by Patel et al. (2006) in a high proportion of patients with the Budd-Chiari syndrome, providing evidence that these patients have a latent myeloproliferative disorder. Sozer et al. (2009) identified somatic homozygous V617F mutations in liver venule endothelial and hematopoietic cells from 2 unrelated PV patients who developed Budd-Chiari syndrome. However, analysis of endothelial cells from a third PV patient with Budd-Chiari syndrome and in 2 patients with hepatoportal sclerosis without PV showed only wildtype JAK2. Endothelial and hematopoietic cells are believed to come from a common progenitor called the hemangioblast. Sozer et al. (2009) concluded that finding V617F-positive endothelial cells and hematopoietic cells from patients with PV who developed Budd-Chiari syndrome indicates that endothelial cells are involved by the PV malignant process, and suggested that the disease might originate from a common cell of origin in some patients. (less)
|
|
Pathogenic
(Aug 07, 2014)
|
no assertion criteria provided
Method: literature only
|
THROMBOCYTHEMIA 3, SOMATIC
Affected status: not provided
Allele origin:
somatic
|
OMIM
Accession: SCV000043916.9
First in ClinVar: Apr 04, 2013 Last updated: Oct 21, 2023 |
Comment on evidence:
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; … (more)
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; 614521), and 8 (50%) of 16 with idiopathic myelofibrosis (254450), Baxter et al. (2005) identified a somatic G-to-T transversion in the JAK2 gene, resulting in a val617-to-phe (V617F) substitution in the negative regulatory JH2 domain. The mutation was predicted to dysregulate kinase activity. It was heterozygous in most patients, homozygous in a subset as the result of mitotic recombination, and arose in a multipotent progenitor capable of giving rise to erythroid and myeloid cells. In all 51 patients with loss-of-heterozygosity (LOH) of chromosome 9p, Kralovics et al. (2005) identified a somatic V617F mutation. Of 193 patients without 9p LOH, 66 were heterozygous for V617F and 127 did not have the mutation. The frequency of V617F was 65% (83 of 128) among patients with polycythemia vera, 57% (13 of 23) among patients with idiopathic myelofibrosis, and 23% (21 of 93) among patients with essential thrombocythemia. James et al. (2005) identified a somatic V617F mutation in 40 of 45 patients with polycythemia vera. They found that the mutation leads to constitutive tyrosine phosphorylation activity that promotes cytokine hypersensitivity and induces erythrocytosis in a mouse model. Jamieson et al. (2006) identified the V617F mutation in peripheral blood and bone marrow cells in 14 of 16 PV patients. In all PV peripheral blood samples analyzed, there were increased numbers of hematopoietic stem cells compared to controls. The V617F mutation was detected in hematopoietic stem cells of all 6 PV samples examined further, and those stem cells showed skewed differentiation towards the erythroid lineage. However, the mutation was also identified in most myeloid precursor cells examined, indicating that the mutation was clonally transmitted to all stem cell progeny. Aberrant erythroid potential of PV stem cells was potently inhibited by the JAK2 inhibitor AG490. An acquired V617F mutation in JAK2 occurs in most patients with polycythemia vera, but is seen in only half those with essential thrombocythemia and idiopathic myelofibrosis. Campbell et al. (2005) attempted to determine whether essential thrombocythemia patients with the mutation are biologically distinct from those without, and why the same mutation is associated with different disease phenotypes. The mutation-positive patients had lower serum erythropoietin and ferritin concentrations than did mutation-negative patients. Mutation-negative patients did, nonetheless, show many clinical and laboratory features characteristic of a myeloproliferative disorder. These V617F-positive individuals were more sensitive to therapy with hydroxyurea, but not anagrelide, than those without the JAK2 mutation. Thus, Campbell et al. (2005) concluded that V617F-positive essential thrombocythemia and polycythemia vera form a biologic continuum, with the degree of erythrocytosis determined by physiologic or genetic modifiers. Most patients with myeloproliferative neoplasms (MPNs) like myelofibrosis have the acquired V617F mutation of JAK2 in hematopoietic stem cells (HSCs), which renders the kinase constitutively active, leading to uncontrolled cell expansion. Mendez-Ferrer et al. (2008) and Mendez-Ferrer et al. (2010) showed that bone marrow nestin (NES; 600915)-positive mesenchymal stem cells (MSCs) innervated by sympathetic nerve fibers regulate normal HSCs. Arranz et al. (2014) demonstrated that abrogation of this regulatory circuit is essential for MPN pathogenesis. Sympathetic nerve fibers, supporting Schwann cells and nestin-positive MSCs, were consistently reduced in the bone marrow of MPN patients and mice expressing the human V617F mutation in the JAK2 gene in HSCs. Unexpectedly, MSC reduction was not due to differentiation but to bone marrow neural damage and Schwann cell death triggered by IL1B (147720) produced by mutant HSCs. In turn, in vivo depletion of nestin-positive cells or their production of CXCL12 (600835) expanded mutant HSC number and accelerated MPN progression. In contrast, administration of neuroprotective or sympathomimetic drugs prevented mutant HSC expansion. Treatment with beta-3-adrenergic agonists that restored the sympathetic regulation of nestin-positive MSCs prevented the loss of these cells and blocked MPN progression by indirectly reducing the number of leukemic stem cells. Arranz et al. (2014) concluded that their results demonstrated that mutant HSC-driven niche damage critically contributes to disease manifestations in MPNs, and identified niche-forming MSCs and their neural regulation as therapeutic targets. Ortmann et al. (2015) determined mutation order in patients with myeloproliferative neoplasms by genotyping hematopoietic colonies or by means of next-generation sequencing. Stem cells and progenitor cells were isolated to study the effect of mutation order on mature and immature hematopoietic cells. The age at which a patient presented with a myeloproliferative neoplasm, acquisition of JAK2 V617F homozygosity, and the balance of immature progenitors were all influenced by mutation order. As compared with patients in whom the TET2 (612839) mutation was acquired first (hereafter referred to as 'TET2-first patients'), patients in whom the JAK2 mutation was acquired first (JAK2-first patients) had a greater likelihood of presenting with polycythemia vera (263300) than with essential thrombocythemia, an increased risk of thrombosis, and an increased sensitivity of JAK2-mutant progenitors to ruxolitinib in vitro. Mutation order influenced the proliferative response to JAK2 V617F and the capacity of double-mutant hematopoietic cells and progenitor cells to generate colony-forming cells. Moreover, the hematopoietic stem-and-progenitor-cell compartment was dominated by TET2 single-mutant cells in TET2-first patients but by JAK2-TET2 double-mutant cells in JAK2-first patients. Prior mutation of TET2 altered the transcriptional consequences of JAK2 V617F in a cell-intrinsic manner and prevented JAK2 V617F from upregulating genes associated with proliferation. Ortmann et al. (2015) concluded that the order in which JAK2 and TET2 mutations were acquired influenced clinical features, the response to targeted therapy, the biology of stem and progenitor cells, and clonal evolution in patients with myeloproliferative neoplasms. Acute Myelogeneous Leukemia Lee et al. (2006) identified heterozygosity for the V617F mutation in bone marrow aspirates from 2 of 113 patients with acute myelogenous leukemia (AML; 601626). Neither patient had a history of previous hematologic disorders and or evidence of erythroid lineage proliferation on bone marrow biopsy. Susceptibility to Pregnancy Loss Mercier et al. (2007) screened for the JAK2 V617F mutation in 3,496 pairs of women enrolled in a matched case-control study of unexplained pregnancy loss (see RPRGL1, 614389) and found that the mutation was significantly associated with the risk of fetal loss (OR, 4.63; p = 0.002) and embryonic loss (OR, 7.20; p = 0.009). The mutation was more frequent in women with embryonic loss than in those with fetal loss (p less than 0.001); clinical examination and complete blood count were normal in all women with the mutation. The increased risks were independent of those associated with the 1691A mutation in the factor V Leiden gene (612309.0001) and the 20210A mutation in the prothrombin gene (176930.0009). Dahabreh et al. (2008) screened 389 women with a history of at least 3 consecutive early or 1 late pregnancy loss but did not find the JAK2 V617F mutation in any case; the authors concluded that latent maternal JAK2 V617F-positive myeloproliferative neoplasm is an unlikely cause of miscarriage. Budd-Chiari Syndrome Chung et al. (2006) described Budd-Chiari syndrome (600880) in a 46-year-old woman who was well until the onset of increasing abdominal distention over a period of several days. She was found to have a combination of the V617F mutation and the factor V Leiden mutation (612309.0001). This somatic JAK2 mutation was found by Patel et al. (2006) in a high proportion of patients with the Budd-Chiari syndrome, providing evidence that these patients have a latent myeloproliferative disorder. Sozer et al. (2009) identified somatic homozygous V617F mutations in liver venule endothelial and hematopoietic cells from 2 unrelated PV patients who developed Budd-Chiari syndrome. However, analysis of endothelial cells from a third PV patient with Budd-Chiari syndrome and in 2 patients with hepatoportal sclerosis without PV showed only wildtype JAK2. Endothelial and hematopoietic cells are believed to come from a common progenitor called the hemangioblast. Sozer et al. (2009) concluded that finding V617F-positive endothelial cells and hematopoietic cells from patients with PV who developed Budd-Chiari syndrome indicates that endothelial cells are involved by the PV malignant process, and suggested that the disease might originate from a common cell of origin in some patients. (less)
|
|
Pathogenic
(Aug 07, 2014)
|
no assertion criteria provided
Method: literature only
|
MYELOFIBROSIS, SOMATIC
Affected status: not provided
Allele origin:
somatic
|
OMIM
Accession: SCV000036036.9
First in ClinVar: Apr 04, 2013 Last updated: Oct 21, 2023 |
Comment on evidence:
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; … (more)
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; 614521), and 8 (50%) of 16 with idiopathic myelofibrosis (254450), Baxter et al. (2005) identified a somatic G-to-T transversion in the JAK2 gene, resulting in a val617-to-phe (V617F) substitution in the negative regulatory JH2 domain. The mutation was predicted to dysregulate kinase activity. It was heterozygous in most patients, homozygous in a subset as the result of mitotic recombination, and arose in a multipotent progenitor capable of giving rise to erythroid and myeloid cells. In all 51 patients with loss-of-heterozygosity (LOH) of chromosome 9p, Kralovics et al. (2005) identified a somatic V617F mutation. Of 193 patients without 9p LOH, 66 were heterozygous for V617F and 127 did not have the mutation. The frequency of V617F was 65% (83 of 128) among patients with polycythemia vera, 57% (13 of 23) among patients with idiopathic myelofibrosis, and 23% (21 of 93) among patients with essential thrombocythemia. James et al. (2005) identified a somatic V617F mutation in 40 of 45 patients with polycythemia vera. They found that the mutation leads to constitutive tyrosine phosphorylation activity that promotes cytokine hypersensitivity and induces erythrocytosis in a mouse model. Jamieson et al. (2006) identified the V617F mutation in peripheral blood and bone marrow cells in 14 of 16 PV patients. In all PV peripheral blood samples analyzed, there were increased numbers of hematopoietic stem cells compared to controls. The V617F mutation was detected in hematopoietic stem cells of all 6 PV samples examined further, and those stem cells showed skewed differentiation towards the erythroid lineage. However, the mutation was also identified in most myeloid precursor cells examined, indicating that the mutation was clonally transmitted to all stem cell progeny. Aberrant erythroid potential of PV stem cells was potently inhibited by the JAK2 inhibitor AG490. An acquired V617F mutation in JAK2 occurs in most patients with polycythemia vera, but is seen in only half those with essential thrombocythemia and idiopathic myelofibrosis. Campbell et al. (2005) attempted to determine whether essential thrombocythemia patients with the mutation are biologically distinct from those without, and why the same mutation is associated with different disease phenotypes. The mutation-positive patients had lower serum erythropoietin and ferritin concentrations than did mutation-negative patients. Mutation-negative patients did, nonetheless, show many clinical and laboratory features characteristic of a myeloproliferative disorder. These V617F-positive individuals were more sensitive to therapy with hydroxyurea, but not anagrelide, than those without the JAK2 mutation. Thus, Campbell et al. (2005) concluded that V617F-positive essential thrombocythemia and polycythemia vera form a biologic continuum, with the degree of erythrocytosis determined by physiologic or genetic modifiers. Most patients with myeloproliferative neoplasms (MPNs) like myelofibrosis have the acquired V617F mutation of JAK2 in hematopoietic stem cells (HSCs), which renders the kinase constitutively active, leading to uncontrolled cell expansion. Mendez-Ferrer et al. (2008) and Mendez-Ferrer et al. (2010) showed that bone marrow nestin (NES; 600915)-positive mesenchymal stem cells (MSCs) innervated by sympathetic nerve fibers regulate normal HSCs. Arranz et al. (2014) demonstrated that abrogation of this regulatory circuit is essential for MPN pathogenesis. Sympathetic nerve fibers, supporting Schwann cells and nestin-positive MSCs, were consistently reduced in the bone marrow of MPN patients and mice expressing the human V617F mutation in the JAK2 gene in HSCs. Unexpectedly, MSC reduction was not due to differentiation but to bone marrow neural damage and Schwann cell death triggered by IL1B (147720) produced by mutant HSCs. In turn, in vivo depletion of nestin-positive cells or their production of CXCL12 (600835) expanded mutant HSC number and accelerated MPN progression. In contrast, administration of neuroprotective or sympathomimetic drugs prevented mutant HSC expansion. Treatment with beta-3-adrenergic agonists that restored the sympathetic regulation of nestin-positive MSCs prevented the loss of these cells and blocked MPN progression by indirectly reducing the number of leukemic stem cells. Arranz et al. (2014) concluded that their results demonstrated that mutant HSC-driven niche damage critically contributes to disease manifestations in MPNs, and identified niche-forming MSCs and their neural regulation as therapeutic targets. Ortmann et al. (2015) determined mutation order in patients with myeloproliferative neoplasms by genotyping hematopoietic colonies or by means of next-generation sequencing. Stem cells and progenitor cells were isolated to study the effect of mutation order on mature and immature hematopoietic cells. The age at which a patient presented with a myeloproliferative neoplasm, acquisition of JAK2 V617F homozygosity, and the balance of immature progenitors were all influenced by mutation order. As compared with patients in whom the TET2 (612839) mutation was acquired first (hereafter referred to as 'TET2-first patients'), patients in whom the JAK2 mutation was acquired first (JAK2-first patients) had a greater likelihood of presenting with polycythemia vera (263300) than with essential thrombocythemia, an increased risk of thrombosis, and an increased sensitivity of JAK2-mutant progenitors to ruxolitinib in vitro. Mutation order influenced the proliferative response to JAK2 V617F and the capacity of double-mutant hematopoietic cells and progenitor cells to generate colony-forming cells. Moreover, the hematopoietic stem-and-progenitor-cell compartment was dominated by TET2 single-mutant cells in TET2-first patients but by JAK2-TET2 double-mutant cells in JAK2-first patients. Prior mutation of TET2 altered the transcriptional consequences of JAK2 V617F in a cell-intrinsic manner and prevented JAK2 V617F from upregulating genes associated with proliferation. Ortmann et al. (2015) concluded that the order in which JAK2 and TET2 mutations were acquired influenced clinical features, the response to targeted therapy, the biology of stem and progenitor cells, and clonal evolution in patients with myeloproliferative neoplasms. Acute Myelogeneous Leukemia Lee et al. (2006) identified heterozygosity for the V617F mutation in bone marrow aspirates from 2 of 113 patients with acute myelogenous leukemia (AML; 601626). Neither patient had a history of previous hematologic disorders and or evidence of erythroid lineage proliferation on bone marrow biopsy. Susceptibility to Pregnancy Loss Mercier et al. (2007) screened for the JAK2 V617F mutation in 3,496 pairs of women enrolled in a matched case-control study of unexplained pregnancy loss (see RPRGL1, 614389) and found that the mutation was significantly associated with the risk of fetal loss (OR, 4.63; p = 0.002) and embryonic loss (OR, 7.20; p = 0.009). The mutation was more frequent in women with embryonic loss than in those with fetal loss (p less than 0.001); clinical examination and complete blood count were normal in all women with the mutation. The increased risks were independent of those associated with the 1691A mutation in the factor V Leiden gene (612309.0001) and the 20210A mutation in the prothrombin gene (176930.0009). Dahabreh et al. (2008) screened 389 women with a history of at least 3 consecutive early or 1 late pregnancy loss but did not find the JAK2 V617F mutation in any case; the authors concluded that latent maternal JAK2 V617F-positive myeloproliferative neoplasm is an unlikely cause of miscarriage. Budd-Chiari Syndrome Chung et al. (2006) described Budd-Chiari syndrome (600880) in a 46-year-old woman who was well until the onset of increasing abdominal distention over a period of several days. She was found to have a combination of the V617F mutation and the factor V Leiden mutation (612309.0001). This somatic JAK2 mutation was found by Patel et al. (2006) in a high proportion of patients with the Budd-Chiari syndrome, providing evidence that these patients have a latent myeloproliferative disorder. Sozer et al. (2009) identified somatic homozygous V617F mutations in liver venule endothelial and hematopoietic cells from 2 unrelated PV patients who developed Budd-Chiari syndrome. However, analysis of endothelial cells from a third PV patient with Budd-Chiari syndrome and in 2 patients with hepatoportal sclerosis without PV showed only wildtype JAK2. Endothelial and hematopoietic cells are believed to come from a common progenitor called the hemangioblast. Sozer et al. (2009) concluded that finding V617F-positive endothelial cells and hematopoietic cells from patients with PV who developed Budd-Chiari syndrome indicates that endothelial cells are involved by the PV malignant process, and suggested that the disease might originate from a common cell of origin in some patients. (less)
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Affects
(Aug 07, 2014)
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no assertion criteria provided
Method: literature only
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ERYTHROCYTOSIS, SOMATIC
Affected status: not provided
Allele origin:
somatic
|
OMIM
Accession: SCV000043917.9
First in ClinVar: Apr 04, 2013 Last updated: Oct 21, 2023 |
Comment on evidence:
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; … (more)
Polycythemia Vera, Thrombocythemia, Myelofibrosis, or Erythrocytosis In 71 (97%) of 73 patients with polycythemia vera (PV; 263300), 29 (57%) of 51 with essential thrombocythemia (THCYT3; 614521), and 8 (50%) of 16 with idiopathic myelofibrosis (254450), Baxter et al. (2005) identified a somatic G-to-T transversion in the JAK2 gene, resulting in a val617-to-phe (V617F) substitution in the negative regulatory JH2 domain. The mutation was predicted to dysregulate kinase activity. It was heterozygous in most patients, homozygous in a subset as the result of mitotic recombination, and arose in a multipotent progenitor capable of giving rise to erythroid and myeloid cells. In all 51 patients with loss-of-heterozygosity (LOH) of chromosome 9p, Kralovics et al. (2005) identified a somatic V617F mutation. Of 193 patients without 9p LOH, 66 were heterozygous for V617F and 127 did not have the mutation. The frequency of V617F was 65% (83 of 128) among patients with polycythemia vera, 57% (13 of 23) among patients with idiopathic myelofibrosis, and 23% (21 of 93) among patients with essential thrombocythemia. James et al. (2005) identified a somatic V617F mutation in 40 of 45 patients with polycythemia vera. They found that the mutation leads to constitutive tyrosine phosphorylation activity that promotes cytokine hypersensitivity and induces erythrocytosis in a mouse model. Jamieson et al. (2006) identified the V617F mutation in peripheral blood and bone marrow cells in 14 of 16 PV patients. In all PV peripheral blood samples analyzed, there were increased numbers of hematopoietic stem cells compared to controls. The V617F mutation was detected in hematopoietic stem cells of all 6 PV samples examined further, and those stem cells showed skewed differentiation towards the erythroid lineage. However, the mutation was also identified in most myeloid precursor cells examined, indicating that the mutation was clonally transmitted to all stem cell progeny. Aberrant erythroid potential of PV stem cells was potently inhibited by the JAK2 inhibitor AG490. An acquired V617F mutation in JAK2 occurs in most patients with polycythemia vera, but is seen in only half those with essential thrombocythemia and idiopathic myelofibrosis. Campbell et al. (2005) attempted to determine whether essential thrombocythemia patients with the mutation are biologically distinct from those without, and why the same mutation is associated with different disease phenotypes. The mutation-positive patients had lower serum erythropoietin and ferritin concentrations than did mutation-negative patients. Mutation-negative patients did, nonetheless, show many clinical and laboratory features characteristic of a myeloproliferative disorder. These V617F-positive individuals were more sensitive to therapy with hydroxyurea, but not anagrelide, than those without the JAK2 mutation. Thus, Campbell et al. (2005) concluded that V617F-positive essential thrombocythemia and polycythemia vera form a biologic continuum, with the degree of erythrocytosis determined by physiologic or genetic modifiers. Most patients with myeloproliferative neoplasms (MPNs) like myelofibrosis have the acquired V617F mutation of JAK2 in hematopoietic stem cells (HSCs), which renders the kinase constitutively active, leading to uncontrolled cell expansion. Mendez-Ferrer et al. (2008) and Mendez-Ferrer et al. (2010) showed that bone marrow nestin (NES; 600915)-positive mesenchymal stem cells (MSCs) innervated by sympathetic nerve fibers regulate normal HSCs. Arranz et al. (2014) demonstrated that abrogation of this regulatory circuit is essential for MPN pathogenesis. Sympathetic nerve fibers, supporting Schwann cells and nestin-positive MSCs, were consistently reduced in the bone marrow of MPN patients and mice expressing the human V617F mutation in the JAK2 gene in HSCs. Unexpectedly, MSC reduction was not due to differentiation but to bone marrow neural damage and Schwann cell death triggered by IL1B (147720) produced by mutant HSCs. In turn, in vivo depletion of nestin-positive cells or their production of CXCL12 (600835) expanded mutant HSC number and accelerated MPN progression. In contrast, administration of neuroprotective or sympathomimetic drugs prevented mutant HSC expansion. Treatment with beta-3-adrenergic agonists that restored the sympathetic regulation of nestin-positive MSCs prevented the loss of these cells and blocked MPN progression by indirectly reducing the number of leukemic stem cells. Arranz et al. (2014) concluded that their results demonstrated that mutant HSC-driven niche damage critically contributes to disease manifestations in MPNs, and identified niche-forming MSCs and their neural regulation as therapeutic targets. Ortmann et al. (2015) determined mutation order in patients with myeloproliferative neoplasms by genotyping hematopoietic colonies or by means of next-generation sequencing. Stem cells and progenitor cells were isolated to study the effect of mutation order on mature and immature hematopoietic cells. The age at which a patient presented with a myeloproliferative neoplasm, acquisition of JAK2 V617F homozygosity, and the balance of immature progenitors were all influenced by mutation order. As compared with patients in whom the TET2 (612839) mutation was acquired first (hereafter referred to as 'TET2-first patients'), patients in whom the JAK2 mutation was acquired first (JAK2-first patients) had a greater likelihood of presenting with polycythemia vera (263300) than with essential thrombocythemia, an increased risk of thrombosis, and an increased sensitivity of JAK2-mutant progenitors to ruxolitinib in vitro. Mutation order influenced the proliferative response to JAK2 V617F and the capacity of double-mutant hematopoietic cells and progenitor cells to generate colony-forming cells. Moreover, the hematopoietic stem-and-progenitor-cell compartment was dominated by TET2 single-mutant cells in TET2-first patients but by JAK2-TET2 double-mutant cells in JAK2-first patients. Prior mutation of TET2 altered the transcriptional consequences of JAK2 V617F in a cell-intrinsic manner and prevented JAK2 V617F from upregulating genes associated with proliferation. Ortmann et al. (2015) concluded that the order in which JAK2 and TET2 mutations were acquired influenced clinical features, the response to targeted therapy, the biology of stem and progenitor cells, and clonal evolution in patients with myeloproliferative neoplasms. Acute Myelogeneous Leukemia Lee et al. (2006) identified heterozygosity for the V617F mutation in bone marrow aspirates from 2 of 113 patients with acute myelogenous leukemia (AML; 601626). Neither patient had a history of previous hematologic disorders and or evidence of erythroid lineage proliferation on bone marrow biopsy. Susceptibility to Pregnancy Loss Mercier et al. (2007) screened for the JAK2 V617F mutation in 3,496 pairs of women enrolled in a matched case-control study of unexplained pregnancy loss (see RPRGL1, 614389) and found that the mutation was significantly associated with the risk of fetal loss (OR, 4.63; p = 0.002) and embryonic loss (OR, 7.20; p = 0.009). The mutation was more frequent in women with embryonic loss than in those with fetal loss (p less than 0.001); clinical examination and complete blood count were normal in all women with the mutation. The increased risks were independent of those associated with the 1691A mutation in the factor V Leiden gene (612309.0001) and the 20210A mutation in the prothrombin gene (176930.0009). Dahabreh et al. (2008) screened 389 women with a history of at least 3 consecutive early or 1 late pregnancy loss but did not find the JAK2 V617F mutation in any case; the authors concluded that latent maternal JAK2 V617F-positive myeloproliferative neoplasm is an unlikely cause of miscarriage. Budd-Chiari Syndrome Chung et al. (2006) described Budd-Chiari syndrome (600880) in a 46-year-old woman who was well until the onset of increasing abdominal distention over a period of several days. She was found to have a combination of the V617F mutation and the factor V Leiden mutation (612309.0001). This somatic JAK2 mutation was found by Patel et al. (2006) in a high proportion of patients with the Budd-Chiari syndrome, providing evidence that these patients have a latent myeloproliferative disorder. Sozer et al. (2009) identified somatic homozygous V617F mutations in liver venule endothelial and hematopoietic cells from 2 unrelated PV patients who developed Budd-Chiari syndrome. However, analysis of endothelial cells from a third PV patient with Budd-Chiari syndrome and in 2 patients with hepatoportal sclerosis without PV showed only wildtype JAK2. Endothelial and hematopoietic cells are believed to come from a common progenitor called the hemangioblast. Sozer et al. (2009) concluded that finding V617F-positive endothelial cells and hematopoietic cells from patients with PV who developed Budd-Chiari syndrome indicates that endothelial cells are involved by the PV malignant process, and suggested that the disease might originate from a common cell of origin in some patients. (less)
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Pathogenic
(-)
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no assertion criteria provided
Method: provider interpretation
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Polycythemia vera
Affected status: yes
Allele origin:
somatic
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Molecular Diagnostics Laboratory, University of Rochester Medical Center
Accession: SCV004175181.1
First in ClinVar: Dec 17, 2023 Last updated: Dec 17, 2023 |
Age: 70-79 years
Sex: female
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Pathogenic
(Apr 30, 2024)
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no assertion criteria provided
Method: clinical testing
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JAK2-related condition
Affected status: unknown
Allele origin:
germline
|
PreventionGenetics, part of Exact Sciences
Accession: SCV005351640.1
First in ClinVar: Oct 08, 2024 Last updated: Oct 08, 2024 |
Comment:
The JAK2 c.1849G>T variant is predicted to result in the amino acid substitution p.Val617Phe. This variant has been reported to be present in almost all … (more)
The JAK2 c.1849G>T variant is predicted to result in the amino acid substitution p.Val617Phe. This variant has been reported to be present in almost all patients with polycythemia vera and more than half of those with essential thrombocytosis and primary myelofibrosis (Vassiliou 2016. PubMed ID: 27563148). Somatic c.1849G>T variants have been reported in myeloproliferative neoplasms (Ortmann et al. 2015. PubMed ID: 25671252; Rumi et al. 2014. PubMed ID: 24986690). This variant is reported in 0.058% of alleles in individuals of Ashkenazi Jewish descent in gnomAD. This variant is interpreted as pathogenic. (less)
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Likely pathogenic
(-)
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no assertion criteria provided
Method: research
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Splenomegaly
Myelofibrosis
Affected status: yes
Allele origin:
unknown
|
NIHR Bioresource Rare Diseases, University of Cambridge
Accession: SCV001162249.1
First in ClinVar: Feb 27, 2020 Last updated: Feb 27, 2020 |
Number of individuals with the variant: 1
Sex: male
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Pathogenic
(-)
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no assertion criteria provided
Method: research
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Polycythemia
Affected status: yes
Allele origin:
unknown
|
NIHR Bioresource Rare Diseases, University of Cambridge
Accession: SCV001162250.1
First in ClinVar: Feb 27, 2020 Last updated: Feb 27, 2020 |
Observation 1:
Number of individuals with the variant: 1
Sex: female
Observation 2:
Number of individuals with the variant: 1
Sex: female
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Pathogenic
(-)
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no assertion criteria provided
Method: research
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Myeloproliferative disorder
Affected status: yes
Allele origin:
unknown
|
NIHR Bioresource Rare Diseases, University of Cambridge
Accession: SCV001162251.1
First in ClinVar: Feb 27, 2020 Last updated: Feb 27, 2020 |
Observation 1:
Number of individuals with the variant: 1
Sex: female
Observation 2:
Number of individuals with the variant: 1
Sex: female
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Pathogenic
(-)
|
no assertion criteria provided
Method: clinical testing
|
not provided
Affected status: yes
Allele origin:
germline
|
Laboratory of Diagnostic Genome Analysis, Leiden University Medical Center (LUMC)
Additional submitter:
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen
Study: VKGL Data-share Consensus
Accession: SCV002036319.1 First in ClinVar: Dec 18, 2021 Last updated: Dec 18, 2021 |
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not provided
(Mar 10, 2016)
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no classification provided
Method: literature only
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Chronic myelogenous leukemia, BCR-ABL1 positive
(Somatic mutation)
Affected status: yes
Allele origin:
somatic
|
Database of Curated Mutations (DoCM)
Accession: SCV000504652.1
First in ClinVar: Mar 08, 2017 Last updated: Mar 08, 2017 |
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not provided
(Mar 10, 2016)
|
no classification provided
Method: literature only
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Acquired polycythemia vera
(Somatic mutation)
Affected status: yes
Allele origin:
somatic
|
Database of Curated Mutations (DoCM)
Accession: SCV000504658.1
First in ClinVar: Mar 08, 2017 Last updated: Mar 08, 2017 |
|
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not provided
(Mar 10, 2016)
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no classification provided
Method: literature only
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Subacute lymphoid leukemia
(Somatic mutation)
Affected status: yes
Allele origin:
somatic
|
Database of Curated Mutations (DoCM)
Accession: SCV000504657.1
First in ClinVar: Mar 08, 2017 Last updated: Mar 08, 2017 |
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Germline Functional Evidence
There is no functional evidence in ClinVar for this variation. If you have generated functional data for this variation, please consider submitting that data to ClinVar. |
Citations for germline classification of this variant
HelpTitle | Author | Journal | Year | Link |
---|---|---|---|---|
Whole-genome sequencing of patients with rare diseases in a national health system. | Turro E | Nature | 2020 | PMID: 32581362 |
Effect of mutation order on myeloproliferative neoplasms. | Ortmann CA | The New England journal of medicine | 2015 | PMID: 25671252 |
Prospective enterprise-level molecular genotyping of a cohort of cancer patients. | MacConaill LE | The Journal of molecular diagnostics : JMD | 2014 | PMID: 25157968 |
Neuropathy of haematopoietic stem cell niche is essential for myeloproliferative neoplasms. | Arranz L | Nature | 2014 | PMID: 25043017 |
Clinical effect of driver mutations of JAK2, CALR, or MPL in primary myelofibrosis. | Rumi E | Blood | 2014 | PMID: 24986690 |
Proliferation and survival signaling from both Jak2-V617F and Lyn involving GSK3 and mTOR/p70S6K/4EBP1 in PVTL-1 cell line newly established from acute myeloid leukemia transformed from polycythemia vera. | Nagao T | PloS one | 2014 | PMID: 24404189 |
Impact of isolated germline JAK2V617I mutation on human hematopoiesis. | Mead AJ | Blood | 2013 | PMID: 23535062 |
Secondary genetic lesions in acute myeloid leukemia with inv(16) or t(16;16): a study of the German-Austrian AML Study Group (AMLSG). | Paschka P | Blood | 2013 | PMID: 23115274 |
The oral HDAC inhibitor pracinostat (SB939) is efficacious and synergistic with the JAK2 inhibitor pacritinib (SB1518) in preclinical models of AML. | Novotny-Diermayr V | Blood cancer journal | 2012 | PMID: 22829971 |
Long term follow up of 93 families with myeloproliferative neoplasms: life expectancy and implications of JAK2V617F in the occurrence of complications. | Malak S | Blood cells, molecules & diseases | 2012 | PMID: 22818858 |
De novo childhood myelodysplastic/myeloproliferative disease with unique molecular characteristics. | Ismael O | British journal of haematology | 2012 | PMID: 22571758 |
Phase 2 study of the JAK kinase inhibitor ruxolitinib in patients with refractory leukemias, including postmyeloproliferative neoplasm acute myeloid leukemia. | Eghtedar A | Blood | 2012 | PMID: 22422826 |
Germline JAK2 mutation in a family with hereditary thrombocytosis. | Mead AJ | The New England journal of medicine | 2012 | PMID: 22397670 |
A case of myeloid sarcoma with correlation to JAK2V617F mutation, complicated by myelofibrosis and secondary acute myeloid leukemia. | Yoshiki Y | Internal medicine (Tokyo, Japan) | 2011 | PMID: 22041374 |
A patient with a 20-year lag phase between JAK2-V617F+ myeloproliferation and NPM1-mutated AML arguing against a common origin of disease. | Roug AS | European journal of haematology | 2011 | PMID: 21689158 |
JAK2 V617F mutation in myelodysplastic syndrome, myelodysplastic syndrome/myeloproliferative neoplasm, unclassifiable, refractory anemia with ring sideroblasts with thrombocytosis, and acute myeloid leukemia. | Jekarl DW | The Korean journal of hematology | 2010 | PMID: 21120162 |
Mesenchymal and haematopoietic stem cells form a unique bone marrow niche. | Méndez-Ferrer S | Nature | 2010 | PMID: 20703299 |
A prospective study of 338 patients with polycythemia vera: the impact of JAK2 (V617F) allele burden and leukocytosis on fibrotic or leukemic disease transformation and vascular complications. | Passamonti F | Leukemia | 2010 | PMID: 20631743 |
AML1 is overexpressed in patients with myeloproliferative neoplasms and mediates JAK2V617F-independent overexpression of NF-E2. | Wang W | Blood | 2010 | PMID: 20339092 |
The presence of JAK2V617F mutation in the liver endothelial cells of patients with Budd-Chiari syndrome. | Sozer S | Blood | 2009 | PMID: 19293426 |
A germline JAK2 SNP is associated with predisposition to the development of JAK2(V617F)-positive myeloproliferative neoplasms. | Kilpivaara O | Nature genetics | 2009 | PMID: 19287384 |
Mutation profile of JAK2 transcripts in patients with chronic myeloproliferative neoplasias. | Ma W | The Journal of molecular diagnostics : JMD | 2009 | PMID: 19074595 |
No evidence for increased prevalence of JAK2 V617F in women with a history of recurrent miscarriage. | Dahabreh IJ | British journal of haematology | 2009 | PMID: 19036091 |
Efficacy of TG101348, a selective JAK2 inhibitor, in treatment of a murine model of JAK2V617F-induced polycythemia vera. | Wernig G | Cancer cell | 2008 | PMID: 18394554 |
Haematopoietic stem cell release is regulated by circadian oscillations. | Méndez-Ferrer S | Nature | 2008 | PMID: 18256599 |
JAK2 V617F mutation in unexplained loss of first pregnancy. | Mercier E | The New England journal of medicine | 2007 | PMID: 17989398 |
Prevalence of the activating JAK2 tyrosine kinase mutation V617F in the Budd-Chiari syndrome. | Patel RK | Gastroenterology | 2006 | PMID: 16762626 |
High molecular response rate of polycythemia vera patients treated with pegylated interferon alpha-2a. | Kiladjian JJ | Blood | 2006 | PMID: 16709929 |
Case records of the Massachusetts General Hospital. Case 15-2006. A 46-year-old woman with sudden onset of abdominal distention. | Chung RT | The New England journal of medicine | 2006 | PMID: 16707754 |
The JAK2 V617F mutation occurs in hematopoietic stem cells in polycythemia vera and predisposes toward erythroid differentiation. | Jamieson CH | Proceedings of the National Academy of Sciences of the United States of America | 2006 | PMID: 16603627 |
V617F mutation in JAK2 is associated with poorer survival in idiopathic myelofibrosis. | Campbell PJ | Blood | 2006 | PMID: 16293597 |
The JAK2 V617F mutation in de novo acute myelogenous leukemias. | Lee JW | Oncogene | 2006 | PMID: 16247455 |
Definition of subtypes of essential thrombocythaemia and relation to polycythaemia vera based on JAK2 V617F mutation status: a prospective study. | Campbell PJ | Lancet (London, England) | 2005 | PMID: 16325696 |
The JAK2V617F activating mutation occurs in chronic myelomonocytic leukemia and acute myeloid leukemia, but not in acute lymphoblastic leukemia or chronic lymphocytic leukemia. | Levine RL | Blood | 2005 | PMID: 16081687 |
Widespread occurrence of the JAK2 V617F mutation in chronic myeloproliferative disorders. | Jones AV | Blood | 2005 | PMID: 15920007 |
A gain-of-function mutation of JAK2 in myeloproliferative disorders. | Kralovics R | The New England journal of medicine | 2005 | PMID: 15858187 |
Activating mutation in the tyrosine kinase JAK2 in polycythemia vera, essential thrombocythemia, and myeloid metaplasia with myelofibrosis. | Levine RL | Cancer cell | 2005 | PMID: 15837627 |
A unique clonal JAK2 mutation leading to constitutive signalling causes polycythaemia vera. | James C | Nature | 2005 | PMID: 15793561 |
Acquired mutation of the tyrosine kinase JAK2 in human myeloproliferative disorders. | Baxter EJ | Lancet (London, England) | 2005 | PMID: 15781101 |
http://docm.genome.wustl.edu/variants/ENST00000381652:c.1849G>T | - | - | - | - |
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Text-mined citations for rs77375493 ...
HelpRecord last updated Oct 20, 2024
This date represents the last time this VCV record was updated. The update may be due to an update to one of the included submitted records (SCVs), or due to an update that ClinVar made to the variant such as adding HGVS expressions or a rs number. So this date may be different from the date of the “most recent submission” reported at the top of this page.