"GeneDx"[submitter] AND "LYRM4"[gene] - ClinVar

Warning: The NCBI web site requires JavaScript to function. more...

Search results

Items: 47

	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 58125	GRCh38/hg38 6p25.3-25.1(chr6:144957-5239181)x3	LINC02521, LINC02525 +281 more	Copy number gain	See cases	GPathogenic
Select item 58423	GRCh38/hg38 6p25.1-24.3(chr6:4427090-8391140)x1	BLOC1S5, BLOC1S5-TXNDC5 +159 more	Copy number loss	See cases	GPathogenic
Select item 1294407	NM_020408.6(LYRM4):c.*65A>C	LYRM4, LYRM4-AS1	Single nucleotide variant (3 prime UTR variant +2 more)	not provided	GBenign
Select item 1317736	NM_020408.6(LYRM4):c.*7G>A	LYRM4, LYRM4-AS1	Single nucleotide variant (3 prime UTR variant +2 more)	not provided	GLikely benign
Select item 680632	NM_020408.6(LYRM4):c.208-220G>A	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 680631	NM_020408.6(LYRM4):c.208-256G>A	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 680636	NM_020408.6(LYRM4):c.208-258dup	LYRM4, LYRM4-AS1	Duplication (intron variant)	not provided	GBenign
Select item 680629	NM_020408.6(LYRM4):c.208-273G>T	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1316696	NM_020408.6(LYRM4):c.208-34463T>C	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 680628	NM_020408.6(LYRM4):c.208-34464A>G	LYRM4-AS1, LYRM4	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 680627	NM_020408.6(LYRM4):c.208-34467G>A	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1260570	NM_020408.6(LYRM4):c.208-34617G>C	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 680630	NM_020408.6(LYRM4):c.208-34942G>A	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1258096	NM_020408.6(LYRM4):c.208-35015C>T	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1317871	NM_020408.6(LYRM4):c.207+30081G>C	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 1283276	NM_020408.6(LYRM4):c.207+29952C>A	LYRM4, LYRM4-AS1	Single nucleotide variant (3 prime UTR variant +1 more)	not provided	GBenign
Select item 1316427	NM_020408.6(LYRM4):c.207+29913G>A	LYRM4, LYRM4-AS1	Single nucleotide variant (3 prime UTR variant +1 more)	not provided	GLikely benign
Select item 1317633	NM_020408.6(LYRM4):c.207+29892C>T	LYRM4, LYRM4-AS1	Single nucleotide variant (3 prime UTR variant +1 more)	not provided	GLikely benign
Select item 1174280	NM_020408.6(LYRM4):c.207+29634del	LYRM4, LYRM4-AS1	Deletion (intron variant)	not provided	GBenign
Select item 1316800	NM_020408.6(LYRM4):c.207+274dup	LYRM4, LYRM4-AS1	Duplication (intron variant)	not provided	GLikely benign
Select item 1269043	NM_020408.6(LYRM4):c.207+201G>A	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 383025	NM_020408.6(LYRM4):c.207+18T>C	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not specified +1 more	GBenign
Select item 420286	NM_020408.6(LYRM4):c.87-18del	LYRM4, LYRM4-AS1	Deletion (intron variant)	not specified	GLikely benign
Select item 676148	NM_020408.6(LYRM4):c.87-39G>A	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1292605	NM_020408.6(LYRM4):c.87-97A>G	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1283110	NM_020408.6(LYRM4):c.87-111G>A	LYRM4, LYRM4-AS1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1317893	NM_020408.6(LYRM4):c.86+248G>A	FARS2, LYRM4	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 1181408	NM_020408.6(LYRM4):c.86+187G>A	LYRM4, LOC129995672 +1 more	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1292511	NM_020408.6(LYRM4):c.86+130G>C	FARS2, LOC129995672 +1 more	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1292135	NM_020408.6(LYRM4):c.86+69G>C	FARS2, LOC129995672 +1 more	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1261629	NM_020408.6(LYRM4):c.86+65T>C	FARS2, LOC129995672 +1 more	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 513283	NM_020408.6(LYRM4):c.33T>G (p.Ser11=)	LOC129995672, LYRM4 +1 more	Single nucleotide variant (synonymous variant +1 more)	not specified +1 more	GLikely benign
Select item 380035	NM_020408.6(LYRM4):c.31T>G (p.Ser11Ala)	FARS2, LOC129995672 +1 more (S11A)	Single nucleotide variant (missense variant +1 more)	not specified +2 more	GBenign
Select item 1292064	NM_020408.6(LYRM4):c.-11_-10dup	FARS2, LOC129995672 +1 more	Duplication (genic upstream transcript variant +2 more)	not provided +2 more	GBenign/Likely benign
Select item 516404	NM_020408.6(LYRM4):c.-10dup	FARS2, LOC129995672 +1 more	Duplication (5 prime UTR variant +1 more)	not specified	GBenign
Select item 508305	NM_020408.6(LYRM4):c.-46T>C	LYRM4, FARS2	Single nucleotide variant (5 prime UTR variant +1 more)	not specified	GLikely benign
Select item 676278	NM_020408.6(LYRM4):c.-170C>T	FARS2, LOC129995673 +1 more	Single nucleotide variant (5 prime UTR variant +1 more)	not provided	GBenign
Select item 676277	NM_020408.5(LYRM4):c.-297G>A	LYRM4, FARS2 +1 more	Single nucleotide variant (5 prime UTR variant)	not provided	GBenign
Select item 676237	NM_020408.5(LYRM4):c.-326C>T	FARS2, LYRM4	Single nucleotide variant (5 prime UTR variant)	not provided	GBenign
Select item 1233400	NC_000006.12:g.5261075T>G	FARS2, LYRM4	Single nucleotide variant (5 prime UTR variant)	not provided	GBenign
Select item 680626	NM_020408.5(LYRM4):c.-393T>C	FARS2, LYRM4	Single nucleotide variant (5 prime UTR variant)	not provided	GBenign
Select item 1318205	NC_000006.12:g.5261155C>T	FARS2, LYRM4	Single nucleotide variant (5 prime UTR variant)	not provided	GLikely benign
Select item 680634	NM_020408.5(LYRM4):c.-494T>G	FARS2, LYRM4	Single nucleotide variant (5 prime UTR variant)	not provided	GBenign
Select item 1293909	NC_000006.12:g.5261241_5261264del	FARS2, LYRM4	Deletion (5 prime UTR variant)	not provided	GBenign
Select item 253526	GRCh37/hg19 6p25.3-22.3(chr6:168775-24023234)x3	STMND1, SYCP2L +95 more	Copy number gain	See cases	GPathogenic
Select item 253511	GRCh37/hg19 6p25.3-24.1(chr6:204009-11608587)x1	BLOC1S5, BMP6 +60 more	Copy number loss	See cases	GPathogenic
Select item 253456	GRCh37/hg19 6p25.3-25.1(chr6:204009-6447311)x1	PPP1R3G, BPHL +33 more	Copy number loss	See cases	GPathogenic

ClinVar

Result Filters

Classification type

Germline classification

Types of conflicts

Molecular consequence

Variation type

Variation size

Variant length

Review status

Additional filters

Search results

Items: 47