2Y43


Conserved Protein Domain Family
RING-HC_RAD18

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cd16529: RING-HC_RAD18 
Click on image for an interactive view with Cn3D
RING finger, HC subclass, found in postreplication repair protein RAD18 and similar proteins
RAD18, also known as HR18 or RING finger protein 73 (RNF73), is an E3 ubiquitin-protein ligase involved in post replication repair of UV-damaged DNA via its recruitment to stalled replication forks. It associates to the E2 ubiquitin conjugating enzyme UBE2B to form the UBE2B-RAD18 ubiquitin ligase complex involved in mono-ubiquitination of DNA-associated PCNA on K164. It also interacts with another E2 ubiquitin conjugating enzyme RAD6 to form a complex that monoubiquitinates proliferating cell nuclear antigen at stalled replication forks in DNA translesion synthesis. Moreover, Rad18 is a key factor in double-strand break DNA damage response (DDR) pathways via its association with K63-linked polyubiquitylated chromatin proteins. It can function as a mediator for DNA damage response signals to activate the G2/M checkpoint in order to maintain genome integrity and cell survival after ionizing radiation (IR) exposure. RAD18 contains a C3HC4-type RING-HC finger, a ubiquitin-binding zinc finger domain (UBZ), a SAP (SAF-A/B, Acinus and PIAS) domain, and a RAD6-binding domain (R6BD).
Statistics
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PSSM-Id: 438192
Aligned: 19 rows
Threshold Bit Score: 83.506
Created: 2-May-2013
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding sitehomodimer
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Structure:2Y43; Homo sapiens Rad18 binds two Zn2+ ions through its RING-HC finger.
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #  #            # #  #  #               #  #         
2Y43_A        19 IDDLLRCGICFEYFNiamIIPQCSHNYCSLCIRKFLs-----YKTQCPTCCVTVTEPDL 72  human
EGI61570      12 IDALLQCGICYDYMDt-sVITSCSHSYCSLCIRKYLh-----HKTQCPTCFEEIFEKDL 64  Panamanian leafcutter ant
EFX84080      24 IDDRLHCPICYNYMKnpvISTACSHNFCSLCIRKNIs-----LKNSCPICFIDISDGLL 77  common water flea
ELT88215      94 LDAVLRCSICFEFLDtamMVTKCSHNYCSVCIRRYVg-----YKLQCPSCRESGKNCRS 147 Capitella sp. I Grassle & Grassle, 1976
EAL68069      13 FGQLLKCPICYDFFNtamMIPKCSHNYCSFCIRQSLs-----FKEFCPSCRISCNATQL 66  Dictyostelium discoideum AX4
KFM63245      29 LDSLLRCQICFEYFDt-sMVTKCSHNYCSFCIRRYMq-----YKSQCPICFKVATEPEL 81  Stegodyphus mimosarum
EDO39512       1 IDNLLRCSICFEYFDipvMVQECSHNYCSVCIRRSIt-----FDTQCPTCHMKTVQQDL 54  starlet sea anemone
KJE91015      52 LDALMRCAVCLEFFNtamMVTHCSHTFCSLCVRRHVe-----ADGRCPSCLKATSSLDL 105 Capsaspora owczarzaki ATCC 30864
O74747        23 LDSSLRCLICHEYFRa-pLITSCSHTFCSFCIRDYLr-----EHPMCPACRAPEQESRL 75  Schizosaccharomyces pombe 972h-
XP_001745442  28 LDGSLRCPICQGYFNhpvLLKTCSHNFCSECIRRHLtqqtrnFKKQCPICSKDCGISDM 86  Monosiga brevicollis MX1

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