2UZX,3AL8,3OL2,3NVN


Conserved Protein Domain Family
Sema

?
smart00630: Sema 
Click on image for an interactive view with Cn3D
semaphorin domain
Statistics
?
PSSM-Id: 214747
Aligned: 62 rows
Threshold Bit Score: 166.004
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2UZX_B      31 IQNVILHE--HHIFLGATNYIYVL-NEeDL-QKVAEYKTGPVLEHPDC------FPCQdcsS---K---A-NLSggvWKD 93   human
O96681      75 LNHLLVDTitGRVFVGGVNRLYQL-SP-Dl-ELSETvktgPQNDSVEC------SILDcp----lN---A-V-Rs--PTD 134  fruit fly
O96682      87 FTHMSFDFmhNVLFAGATNKILKL-NE-Nl-RVLAEavtgPLHDSPQC------HAGGcp----eD---I-ETS---LVN 146  fruit fly
O43157      35 LQHLARDPtsGTLYLGATNFLFQL-SP-Gl-QLEATvstgPVLDSRDC------LPPVmp----dE---C-P-Qa-qPTN 95   human
O15031      34 LNHLAVDEasGVVYLGAVNALYQL-DA-Kl-QLEQQvatgPALDNKKC------TPPIea----sQ---C-H-Ea-eMTD 94   human
Q9QY40      34 FNHLVLAPdqGKLYVGAVNHLFQL-SP-El-KMESVavtgPVIDSPDC------VPFRdl----aE---C-P-Qa-qLTD 94   house mouse
Q9Y4D7      59 TNNFALDGaaGTVYLAAVNRLYQL-SG-ANlSLEAEaavgPVPDSPLC------HAPQ---LpqaS---C-EHPr-rLTD 122  human
ABA00169    43 FEKMAIDPstTRVFVGAVNSLYDLtSA-DL-TVRRHVQTGPQDDSPLCrdarnrEECR---H---------QLS---RTN 105  nematode
3OL2_B      19 LQHLARDPtsGTLYLGATNFLFQL-SP-GL-QLEATVSTGPVLDSRDC------LPPV---M---PdecP-QAQ---PTN 79   human
NP_497001   39 IDDFIVSRdqQTIYVASLNRLTSL-SI-SNfSIQHEVSLGPVQDSPWC------SADG---K---S---ClKDNrpfPTD 101  nematode
2UZX_B      94 NINMALVVDTYYD-DQLISCGS-VNRGTCQRHVFPhnhtadiqsevhcifspqieeps---------------------- 149  human
O96681     135 NYNKV-LLIDRAT-SRLIACGS-LFQGTCTVRNLQnvsiiehevpdavvandan-------------------------- 185  fruit fly
O96682     147 NFNKI-LVVSYAHdGILIACGS-IRQGACEIYSLPrfpatpqffavplaanden-------------------------- 198  fruit fly
O43157      96 NPNQL-LLVS-PG--ALVVCGS-VHQGVCEQRRLGqleqlllrperpgdtqyvaa------------------------- 145  human
O15031      95 NVNQL-LLLD-PPrKRLVECGS-LFKGICALRALSnislrlfyedgsgeksfvasn------------------------ 147  human
Q9QY40      95 NANQL-LLVS-SRtQELVACGQ-VKQGVCEKRRLGdvtqvlyqaedpgdgqfvaa------------------------- 146  house mouse
Q9Y4D7     123 NYNKI-LQLDP-GqGLVVVCGS-IYQGFCQLRRRGnisavavrfppaappaepvtvfpsmlnvaanhpnastvglvlppa 199  human
ABA00169   106 SHTKA-LSVYDKS-SKLIEC-SnLYQGRCRLRNLHniseviseaieprvsndts-------------------------- 156  nematode
3OL2_B      80 NPNQLLLV---SP-GALVVCGS-VHQGVCEQRRLGqleqlllrperpgdtqyvaa------------------------- 129  human
NP_497001  102 VRTKI--LQILPT-NQILQCGS-VKLGSCSTFNSKlslitestiavaan------------------------------- 146  nematode
2UZX_B     150 -------qcpdcvvsalgakvlssvkdrfiNFFVGNTI-NSSYFPDHPLHSIS---VRRlketkdg----fmfltdqSYI 214  human
O96681     186 ------------sstvafiapgppqhpvtnvMYVGVTYtNNSPYRSEIP-AVA---SRSlektkmf----qiassavTTG 245  fruit fly
O96682     199 ------------astyafvgparyawkeediLYVGTTFtN-VGDYRHDVPAIS---SRRlddlnya-----efsiqqSII 257  fruit fly
O43157     146 -----------ndpavstvglvaqglageplLFVGRGYtSR-GVGGGI-PPIT---TRAlwppdp-------qaafsYEE 202  human
O15031     148 -----------degvatvglvsstgpggdrvLFVGKGN----GPHDN-GIIVS---TRLldrtdsr----eafeaytDHA 204  human
Q9QY40     147 ------------ntlgvttvglvvplpgrdlLLVARGl-A--GKLSAGVPPLT---VRQlagpqp-------fssegLGR 201  house mouse
Q9Y4D7     200 agaggsrllvgatytgygssffprnrsledHRFENT--------PEIAIRSLD---TRgdlaklf------tfdlnpSDD 262  human
ABA00169   157 ------------ssvvifvgsgpanlssepVLYVGATI-GSGDHDRMSVSSLF---LRPqkafevv----fpglyggTHV 216  nematode
3OL2_B     130 -----------ndpavstvglvaqglagepLLFVGRGY-TSRGVGGGIPPITTralWPPdpqa-----------afsYEE 186  human
NP_497001  147 -----------------spdastvskiidnRLIVAASA-TKESPYRDPFPAVA---IRNlpglnvenagdlegeaavFLR 205  nematode
2UZX_B     215 DVLpEFRDS--Y---PIKYVHAFE--------SNNFIYFLTVQRETLD---AQTFHTRIIRFCs-------INSGLHSYM 271  human
O96681     246 TRTfINSYA--RetyFVNYVYGFS--------SERFSYFLTTQLKHSHhssPKEYITKLVRICqe-------dSNYYSYT 308  fruit fly
O96682     258 NIDvKYrd-----hfLVDYIYGFN--------SSEYAYFIIVQKKSHla-dEAGYVTRLARICit-------dPNYDSYT 316  fruit fly
O43157     203 TAKlAVGRL--Se-ySHHFVSAFA--------RGASAYFLFLRRDLQAq--SRAFRAYVSRVClr-------dQHYYSYV 262  human
O15031     205 TYKaGY--L--St-nTQQFVAAFE--------DGPYVFFVFNQQDKH----PARNRTLLARMCre-------dPNYYSYL 260  human
Q9QY40     202 LVVgDFSd------yNNSYVGAFS--------DAHSAYFVFRRRGARA---QTEYRSYVARVClr-------dVNLYSYV 257  house mouse
Q9Y4D7     263 NILkIKQGA--KeqhKLGFVSAFLhpsdpppgAQSYAYLALNSEARAgd-kESQARSLLARIClphgaggdAKKLTESYI 339  human
ABA00169   217 SLDyRSRGY--Yk-yQIDYINGFE--------SGDYAYFVTRQRVNIAddsS--IQSRLVRVCtg-------dKNFHSYT 276  nematode
3OL2_B     187 TAKlAVGRLseY---SHHFVSAFA--------RGASAYFLFLRR--DLqaqSRAFRAYVSRVClr-------dQHYYSYV 246  human
NP_497001  206 AAYk-------N---AFKFLYTFT--------HQHFVFVVAMVTPREs---RLPMTTRLIRFCrn-------dtKFESYS 257  nematode
2UZX_B     272 EMPLECILTEkrkkrsTKKEVFNILQAAYVSKPGaqlarqigaSL-NDDILFAVFA-------QskpdS----------- 332  human
O96681     309 EIPVECISDA------QGGTKFNLVQAGFLGKPSsnlaqslgiSi-QNDVLFAVFS-------K----Ge---------- 360  fruit fly
O96682     317 EITVQCTATe-------NNVDYNIVRDAKVTPAShklaqkmgiKk-DDHVLVTVFS-------P----Sre--------i 369  fruit fly
O43157     263 ELPLACEG-G------R----YGLIQAAAVATSR---------EVaHGEVLFAAFS-------S----Aapptvgrppsa 311  human
O15031     261 EMDLQCRDPd--------------IHAAAF---GtclaasvaaPg-SGRVLYAVFS-------R----Ds---------- 301  human
Q9QY40     258 EMPLTCHGQ-------------GLIQAAFLTP----------------DTLLGAFS-------A----G----------- 286  house mouse
Q9Y4D7     340 QLGLQCAGG---------------------AGRGdlysrlvsvFp-ARERLFAVFE-------R----Pqg--------s 378  human
ABA00169   277 EVPLECTQNG---------VEFNLVQDVYVTRAGyelaksldiSV-SDPVLYGVFWegdknsyR----S----------- 331  nematode
3OL2_B     247 ELPLACEGG-----------RYGLIQAAAVATSR---------EVaHGEVLFAAFS-------S----A----------- 284  human
NP_497001  258 EIELQCR--G------EDNTNYPFLNAIIQ----------------SYDKLIAS-F-------S----T----------- 290  nematode
2UZX_B     333 -AEPMDR------------SAMCAFPIKYVNDFFNKIVNKNNVRCLQHFY-GpN-HE-------HCFNRTL-L-RNS-SG 387  human
O96681     361 gNTPTNN------------SALCIYSLKSIRRKFMqNIKSCFNGSGMRGLnFiS-PSm------pCVLTKLqtigED-Fc 420  fruit fly
O96682     370 sNQPESK------------SAMCIYSIKDIEDMFIeNIHLCFNGTTKDRNl--G-YIsgtindgRCPIVGSl-------- 426  fruit fly
O43157     312 aAGASGA------------SALCAFPLDEVDRLANrTRDACYTREGRAEDgTeV-AYieydvnsDCAQLPVdtl--dayP 376  human
O15031     302 rSSGGPG------------AGLCLFPLDKVHAKMEaNRNACYTGTREARDiFyKpfh----gdiQCGGHAPgS-SKS-FP 363  human
Q9QY40     287 --TSQAQ------------AALCAFPLADLDRSMEqARRLCYTTGGQGPSgMeE-ATveygvtsRCVTLPPdS-PES-YP 349  house mouse
Q9Y4D7     379 pAARAAP------------AALCAFRFADVRAAIRaARTACFVEPAPDVVaVlD-SVvqg-tgpACERKL--N-IQL-QP 440  human
ABA00169   332 -QEPTGK------------SAICMFTMREIETSFKQNIMKCYKGTSGLKk---N-LPwfs-sndDCRFTT--------LP 385  nematode
3OL2_B     285 -APPTVGrppsaaagasgaSALCAFPLDEVDRLANRTRDACYTREGRAED-GtEvAYieydvnsDCAQLPV-D-TLDaYP 360  human
NP_497001  291 -SSTSPK------------SSICVFSMQKVKLTFWYNVDRCRSGT---DS-IrL-PHigr--dtKCVNKAH-I-PLD-ED 347  nematode
2UZX_B     388 CE----ARRDEYRTEFTTALQRVDLFMGQFSEVLLTSIS---TFIKG---DLTIANLGTSEGRFMQVVVSRSGPSTP--- 454  human
O96681     421 g----lDVNSPL--GGETPITSVPV---AMFNTKLTSVAa----TSt--sGYTVVFVGTSDGFLKKVVIESSSIAn---e 482  fruit fly
O96682     427 gNiy-nFCSVGLKISGVSPITAHALF--HFDNVSVTSVTa----TSTtdqQHSLAFLGTNMGVIKKVLLSGQSPGe---- 495  fruit fly
O43157     377 cg---sDHT-PSPMASRVPLEATPIL--EWPGIQLTAVAv----TMe--dGHTIAFLGDSQGQLHRVYLGPGSDGh---p 441  human
O15031     364 c----gSEHLPYPLGSRDGLRGTAVL--QRGGLNLTAVTv----AAe--nNHTVAFLGTSDGRILKVYLTPDGTSs---e 428  human
Q9QY40     350 c----gDEHTPSPIAGRQPLEAQPLL---QLGQSISAVAa----LQt--dGHTIAFLGDTQGQLHKVFLNSSHGQv---y 413  house mouse
Q9Y4D7     441 EQldcgAAHLQHPLSILQPLKATPVFR----APGLTSVAv----ASv--nNYTAVFLGTVNGRLLKINLNESMQVv---s 507  human
ABA00169   386 WEgikcGKDVNSKIGGDTPISTSATYVMEDSSNLLTAIAintTRSS------TVAFVGTQGGQLHKILIESKRSAEK--- 456  nematode
3OL2_B     361 Cg----SDHTPSPMASRVPLEATPIL--EWPGIQLTAVAvtmED------GHTIAFLGDSQGQLHRVYLGPGSDGh---p 425  human
NP_497001  348 SCelgvGGSIELVEMST-----------KDIMGKVTSLMa------V---DQKAIFAGTTTSQIVMFKWDE-HHSNQlee 406  nematode
2UZX_B     455 HVNFLL----DSHPV-S 466  human
O96681     483 YASFAVd---lGSEI-N 495  fruit fly
O96682     496 YEEIVVd---aGNRI-L 508  fruit fly
O43157     442 YSTQSIq---qGSAV-S 454  human
O15031     429 YDSILVe---iNKRV-K 441  human
Q9QY40     414 HSQQVGp---pGSAI-S 426  house mouse
Q9Y4D7     508 RRVVTVa---yGEPV-H 520  human
ABA00169   457 YATEMLt---dNEPIlS 470  nematode
3OL2_B     426 YSTQSIq--qGSAVS-R 439  human
NP_497001  407 YGRKEVgdgrTGSEV-S 422  nematode
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap