4AM9


Conserved Protein Domain Family
LcrH_SycD

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TIGR02552: LcrH_SycD 
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type III secretion low calcium response chaperone LcrH/SycD
Genes in this family are found in type III secretion operons. LcrH, from Yersinia is believed to have a regulatory function in the low-calcium response of the secretion system. The same protein is also known as SycD (SYC = Specific Yop Chaperone) for its chaperone role. In Pseudomonas, where the homolog is known as PcrH, the chaperone role has been demonstrated and the regulatory role appears to be absent. ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array.
Statistics
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PSSM-Id: 274197
Aligned: 16 rows
Threshold Bit Score: 105.069
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4AM9_A         5 SGGGTIAMLNEISS-DTLEQLYSLAFNQYQSGKYEDAHKVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83  Yersinia entero...
CAF23511      29 AEGKTAQQIMELQD-STMAKFYGAAYYLFEHKRYEDAAHAFLFLATLNPYIHDYWLGLGMATQMCQNYEAAIDAYELAAF 107 Candidatus Prot...
CAF24108      39 SEGMTPKDAMGVNS-NILESVYAQAYRLYNTGKYIEAVHLFRVLIMMNYAESKYVLGLAACFHMMKEYKNAIQTYTMCSA 117 Candidatus Prot...
CAF24249      30 EDGLLSKSSFDLDP-EKMTKLYSRAYQLYTAGKFQNAQAIFSLLALVEYNEFNFIYGWASCCLMLKEYEKAAEGYIRCGM 108 Candidatus Prot...
CAF24110      36 GGNIPPKEALGFDE-NAMNQIYRHGFNEFQSGRYDEALKIFTFLRQIDVGNFDYTFAIAACHQFKQEYSEAAANYIICTY 114 Candidatus Prot...
CAE32119      13 ARLDALPGSRRLTA-EQLEVIYAMAYAHVARCEYGKALPIFAFLAQYGPTRKHYWAGLALCLQKTDRPDEARNIYALILT 91  Bordetella bron...
WP_010883448  65 SNGLDLQQILGLSD-YLLEEIYTVAYTFYSQGKYNEAVGLFQLLAAAQPQNYKYMLGLSSCYHQLHLYNEAAFGFFLAFD 143 Chlamydia pneum...
WP_000711030  18 RRGGSLRMLLDDDVtQPLNTVYRYAMQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQAQKHWGEAIYAYGRAAQ 97  Salmonella ente...
ELO84368      19 PEDI-LKQLLSVDP----ETVYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINFYGHALM 93  Salmonella ente...
WP_000087467  16 QDGGTLASLTNLTQ-QDLNDLHSYAYTAYQSGDVITARNLFHLLTYLEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCAT 94  Escherichia coli
4AM9_A        84 MDIKEPRFPFHAAECLLQKGELAEAESGLFLAQELIANKPefkeLSTRVSSMLEAI 139 Yersinia enterocolitica
CAF23511     108 CDINSPVPYFYLAKCLFAIHDRESALQALDLAIETAGESEeytdLKKQAEEAKRIL 163 Candidatus Protochlamydia amoebophila U...
CAF24108     118 IDPNTPIPYYHSSDCFIQMKDYLSAMLCLQLAIDKSQNKPefakIKERAILSLESL 173 Candidatus Protochlamydia amoebophila U...
CAF24249     109 LDLKNPLPYFYAADCYLNKQERVSACIALQIVIRRAQLNSqyseIQKRAEMTLETL 164 Candidatus Protochlamydia amoebophila U...
CAF24110     115 IDRLNPVPHFHLYDCFVKLNFPMSALKAIKETIALAELNPrdseLKERALLEYKSF 170 Candidatus Protochlamydia amoebophila U...
CAE32119      92 LYPDSADAVLRTAECELALGENERAQAALFGAIAIDAESGqpgpVSHRARALLDLI 147 Bordetella bronchiseptica RB50
WP_010883448 144 AQPDNPIPPYYIADSLLKLQQPEESNNFLDVTMDICGNNPefkiLKERCQIMKQSI 199 Chlamydia pneumoniae
WP_000711030  98 IKIDAPQAPWAAAECYLACDNVCYAIKALKAVVRICGEVSehqiLRLRAEKMLQQL 153 Salmonella enterica
ELO84368      94 LDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADAswseIRQNAQIMVDTL 149 Salmonella enterica subsp. enterica ser...
WP_000087467  95 LVMQDPRASYYSGISYLLVGNKKMAKKAFKACLMWCNEKEkyttYKENIKKLLGNT 150 Escherichia coli
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