2AXI,1YCQ,2LZG,1TTV,4DIJ,4J3E


Conserved Protein Domain Family
MDM2

?
cd17672: MDM2 
Click on image for an interactive view with Cn3D
p53-binding domain found in E3 ubiquitin-protein ligase MDM2 and similar proteins
MDM2, also known as double minute 2 protein (Hdm2), or oncoprotein MDM2, or p53-binding protein, exerts its oncogenic activity predominantly by binding the p53 tumor suppressor and blocking its transcriptional activity. It forms homo-oligomers and displays E3 ubiquitin ligase activity, catalyzing the attachment of ubiquitin to p53 as an essential step in the regulation of its expression levels in cells. Moreover, in response to ribosomal stress, MDM2-mediated p53 ubiquitination and degradation can be inhibited through the interaction with ribosomal proteins L5, L11, and L23. MDM2 also has a p53-independent role in tumorigenesis and cell growth regulation. In addition, it binds interferon (IFN) regulatory factor-2 (IRF-2), an IFN-regulated transcription factor, and mediates its ubiquitination. MDM2 contains an N-terminal p53-binding domain and a C-terminal zinc RING-finger domain conferring E3 ligase activity that is required for ubiquitination and nuclear export of p53. It is also responsible for the hetero-oligomerization of MDM2, which is crucial for the suppression of P53 activity during embryonic development, and the recruitment of E2 ubiquitin-conjugating enzymes. MDM2 also harbors a RanBP2-type zinc finger (zf-RanBP2) domain, as well as a nuclear localization signal (NLS) and a nuclear export signal (NES), near the central acidic region.
Statistics
?
PSSM-Id: 349491
Aligned: 10 rows
Threshold Bit Score: 134.177
Created: 6-Jul-2017
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
p53 binding
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:p53 binding site [polypeptide binding site]
Evidence:
  • Structure:1YCQ, Xenopus laevis MDM2 binds the transactivation domain of human p53, contacts at 4A.
  • Citation:PMID 8875929
  • Structure:2AXI, Homo sapiens MDM2 in complex with a beta-hairpin mimetic inhibitor, contacts at 4A.
  • Structure:4DIJ, Homo sapiens MDM2 binds two molecules of inhibitors, contacts at 4A.
  • Structure:4J3E, Xenopus laevis MDM2 binds Nutlin-3a, contacts at 4A.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                     #  ##  ##    #    #                    ## #  ##    
2AXI_A         9 ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIY 88  human
1YCQ_A         9 EKLVQPTPLLLSLLKSAGAQKETFTMKEVIYHLGQYIMAKQLYDEKQQHIVHCSNDPLGELFGVQEFSVKEPRRLYAMIS 88  African clawed ...
2LZG_A        25 ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIY 104 human
1TTV_A         9 EKLVQPTPLLLSLLKSAGAQKETFTMKEVLYHLGQYIMAKQLYDEKQQHIVHCSNDPLGELFGVQEFSVKEHRRIYAMIS 88  African clawed ...
4DIJ_A        10 ETLVRPKPELLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIY 89  human
4J3E_A         2 EKLVQPTPLLLSLLKSAGAQKETFTMKEVLYHLGQYIMAKQLYDEKQQHIVHCSNDPLGELFGVQEFSVKEHRRIYAMIS 81  African clawed ...
AAF04192      21 EALVKPKPLLLKLLKLAGAQKDTFTMKEVIFYLGQYIMSKQLYDEKEQHIVHCANDLLGDLFGVTSFSVKEHRRIYSMIS 100 chicken
XP_014350442  20 EALVKPKQLLLKLLKCAGAQKDIFTMKEVIYYLGQYIMAKQLYDKNQQHIVHCSNDLLGELFGVQSFSVKEPRRLYAMIS 99  coelacanth
O42354        18 EKLVRPKVQLKSLLEDAGADKDVFTMKEVMFYLGKYIMSKELYDKQQQHIVHCGEDPLGAVLGVKSFSVKEPRALFALIN 97  zebrafish
NP_001279595  24 ESQVRPKPLLLKLLQFAGAQNEIFTIKEVMYYLGQYIMAKHLYDEKQQHVVHCSDNPLGRLFGVQSFSIKEPRTLYTMLS 103
Feature 1           
2AXI_A        89 RNL 91  human
1YCQ_A        89 RNL 91  African clawed frog
2LZG_A       105 RNL 107 human
1TTV_A        89 RNL 91  African clawed frog
4DIJ_A        90 RNL 92  human
4J3E_A        82 RNL 84  African clawed frog
AAF04192     101 RNL 103 chicken
XP_014350442 100 KNL 102 coelacanth
O42354        98 RNL 100 zebrafish
NP_001279595 104 KNL 106

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap