6N7P


Conserved Protein Domain Family
FF

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pfam01846: FF 
Click on image for an interactive view with Cn3D
FF domain
This domain has been predicted to be involved in protein-protein interaction. This domain was recently shown to bind the hyperphosphorylated C-terminal repeat domain of RNA polymerase II, confirming its role in protein-protein interactions.
Statistics
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PSSM-Id: 426471
Aligned: 114 rows
Threshold Bit Score: 30.8879
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6N7P_J       494 EQKKHYFwLLLQRTYtktgKPKPSTWDLASKELGESLEY--KALgdEDNIRRQIFEDF 549 Saccharomyces cerevisiae S288C
XP_001349901 439 DAREHLK-FLFEEKK----VNPKMTWDSALKILEADNRWssLVIl-TKGEKKQLFCEY 490
A0BJK1        96 NPIDQFT-QLLKDNK----ITSSVKWDSVVKQLQSDSRW--KCIg-SISHKKKIYNQY 145 Paramecium tetraurelia
Q7ZUE4       639 RKEAAFK-SMLKQATp--pLEPEATWEGVRERFLKEPAF--EDIt-LESERKRIFKDF 690 zebrafish
O14176       260 KIRKEFI-EMLKSSDk---IHSYTLWRTVKNEFSSHPAF--NATs-SETEQQQLFFEY 310 Schizosaccharomyces pombe 972h-
Q0UMQ7       230 KLRSDFT-AMLRSHPe---IKHYTRWRTALPFIEDETIF--RSAk-DDSERRALLDEY 280 Parastagonospora nodorum SN15
Q7SD01       267 KLRADFA-TMLRSHPe---IKHYTRWKTARPMIEGETIF--RSTn-DDNERRQLFEDY 317 Neurospora crassa
Q6FL86       205 KFLEAFG-NLLKSNKn---IHYYTRWTTVKKMLANESIFkhAVV--PEKEMKRKFNDY 256 [Candida] glabrata
Q6CMR6       210 KFEQAFI-EMLEKLPn---IRYYSRWKTIKRQIMNEPIYkhSVI--DEKQKKRTFQRY 261 Kluyveromyces lactis
Q759W3       199 KFKDAFL-AMLRERNd---IHYYTRWPTVRRLIANEPIYkhSVM--SEKVKRETFQEY 250 Eremothecium gossypii
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