1KWM,1NSA,5LRG


Conserved Protein Domain Family
M14_CPB

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cd03871: M14_CPB 
Click on image for an interactive view with Cn3D
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B subgroup
Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients. this subfamily also includes thrombin activatable fibrinolysis inhibitor (TAFIa), a carboxypeptidase that stabilizes fibrin clots by removing C-terminal arginines and lysines from partially degraded fibrin. Inhibition of TAFIa stimulates the degradation of fibrin clots and may help in prevention of thrombosis.
Statistics
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PSSM-Id: 349443
Aligned: 9 rows
Threshold Bit Score: 591.735
Created: 18-Oct-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteactive site
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:[H] [ED] [H]Click to see conserved feature residue pattern help
Evidence:
  • Comment:Metallocarboxypeptidases share the zinc binding motif HXXE...H, where the zinc ion is penta-coordinated to ND1 atoms of the histidines, OE1 and OE2 atoms of the glutamic acid, and to a water molecule in a slightly distorted tetrahedral manner.
  • Structure:1KWM: human Procarboxypeptidase B; contacts at 3.5A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                    #  #             
1KWM_A     99 HSYeKYNKWETIEAWTQQVATENPaLISRSVIGTTFEGRAIYLLKVGka-gqNKPAIFMDCGFHAREWISPAFCQWFVRE 177 human
1NSA_A     93 HSYeKYNNWETIEAWTEQVTSKNPdLISRSAIGTTFDGDNIYLLKVGkp-gsNKPAIFMDCGFHAREWISQAFCQWFVRD 171 pig
AAF01344  114 YNYeKYNSWEKIDAWTADIANENPsLVSRLQIGTTFEGRPMPLLKVGkp-gvNKKAIFIDCGFHAREWISPAFCQWFVRE 192 jararaca
AAH84832  111 HSYeKYNDLDTINAWSANIAAQNPgLVSRSQMGSSYEGRPIYLLKVGks-gvNKKAVFIDCGFHAREWITPAFCQWFVKE 189 African clawed frog
AAH67637  110 HDYtKYNSWATINDWAISISSANPdLISRQSIGNTYEGRTMHLLKIGkntgsNKPAVFMDCGFHAREWITHAFCQWFVNE 189 zebrafish
P15088    114 HSYaKYNNWEKIVAWTEKMMDKYPeMVSRIKIGSTVEDNPLYVLKIGek-neRRKAIFTDCGIHAREWVSPAFCQWFVYQ 192 human
OCT80939  120 HSYtKYNTWEKIVEWTGNLAKKYPnLVKKVDIGKTVEGRPMYVLQVGna-nsATKAIFMDCGIHAREWISPAFCQWFVKE 198 African clawed frog
OCT80938  116 FSSpKYQTWLEIATWAYRVSLKHPnLVSIVHAGDTYEGRPILILKVGsq-ktNKNGIVFECGVHAREWISPAFCQWFVNE 194 African clawed frog
5LRG_A      4 HSYeKYNNWETIEAWTKQVTSENPdLISRTAIGTTFLGNNIYLLKVGkp-gpNKPAIFMDCGFHAREWISHAFCQWFVRE 82  pig
Feature 1                                                                                     
1KWM_A    178 AVRTYGREIq-VTELLNK------LDFYVLPVLNIDGYIYTWTKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGASR 250 human
1NSA_A    172 AVRTYGYEAh-MTEFLDN------LDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGSSCTGTDPNRNFNAGWCTVGASV 244 pig
AAF01344  193 AVRTYGKETi-MTQLLNK------LDFYILPVLNIDGYVYSWKQSRMWRKTRSVNAGSTCIGTDPNRNFDAAWCSVGASR 265 jararaca
AAH84832  190 AVNSYGVEAe-FTSLLDS------LDFYILPVLNVDGYVYTWTTNRMWRKTRSPNANSSCVGTDPNRNFNAGWCTVGASS 262 African clawed frog
AAH67637  190 AVSTYGSDPd-MTNLLDR------MDFFVLPVFNIDGYEYTWNRDRMWRKTRSKNSGSSCIGTDPNRNFNAGWCTVGASS 262 zebrafish
P15088    193 ATKTYGRNKi-MTKLLDR------MNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNTN 265 human
OCT80939  199 VMITYALCLlyQTGKNNIrelvksLTFYILPVFNIDGYVWTWTEDRMWRKNRSPSDDGNCVGTDLNRNFNISWCDIGSST 278 African clawed frog
OCT80938  195 AIRSYGKDKt-MTKLLDR------MTFHIVPVLNIDGYVWTWTHDRMWRKNRYPDPKTNCVGTDVNRNFNVSWGIGFHND 267 African clawed frog
5LRG_A     83 AVLTYGYESh-MTEFLNK------LDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGAST 155 pig
Feature 1                                           #                                         
1KWM_A    251 NPCDETYCGPAAESEKETKALADFIRNKlssIKAYLTIHSYSQMMIYPYSYAYKLGENNAELNALAKATVKELAslHGTK 330 human
1NSA_A    245 NPCNETYCGSAAESEKETKALADFIRNNlssIKAYLTIHSYSQMILYPYSYDYKLPENDAELNSLAKGAVKELAslYGTS 324 pig
AAF01344  266 NPCSETYCGSKPESEKETKALADFIRRNrsiIQAYLTIHSYSQMLLYPYSYTYDLTSNNKKLNSIAKEAIRELKvlFGTE 345 jararaca
AAH84832  263 RACDETYCGAAPESEPETKALANFIRQNigsIKGYLTIHSYSQMLLFPYSYTYSIAKDHNELNSVAQGAVNKLTslYRTK 342 African clawed frog
AAH67637  263 NPCSDTYCGSSPESEIESKNLANFIRTNksvIKAYLTVHSYSQLLLFPYSYKYDLAAHHSELMSVSQGAIAALRslYGTK 342 zebrafish
P15088    266 DPCADNYRGSAPESEKETKAVTNFIRSHlneIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKIGTDVLStrYETR 345 human
OCT80939  279 EPCSEIYCGATAESEIEAKNVANFIRSHvdsIKAYISIHSYSQMLLYPFSYTYNLAPDHKELDEIAKGAVSELKglYGTS 358 African clawed frog
OCT80938  268 EPCSEIYGGSGPESEKETKALASYIRDNissLKAYISFHAYGQLLMYPYGYKSKMAPNHEKLDEIAVSAVQALStlYGTN 347 African clawed frog
5LRG_A    156 DPCDETYCGSAAESEKETKALADFIRNNlssIKAYLTIHSYSQMILYPYSYDYKLPENNAELNNLAKAAVKELAtlYGTK 235 pig
Feature 1                                                                         
1KWM_A    331 YTYGPGATTIYPAAGGSDDWAYDqGIRYSFTFELRDtGRYGFLLPESQIRATCEETFLAIKYVASYVL 398 human
1NSA_A    325 YSYGPGSTTIYPAAGGSDDWAYNqGIKYSFTFELRDkGRFGFVLPESQIQATCQETMLAVKYVTNYTL 392 pig
AAF01344  346 YTYGPGAATIYPAAGGSDDWAYDqGIKYAFTFELRDkGRYGFALPESQIKPTCEETMIAVKYIAEYML 413 jararaca
AAH84832  343 YTYGAGGTTIYLAAGGSDDWAYDtGVKYSFTFELRDtGRYGFALPETQIKPTSEETLLAVKYIANHIK 410 African clawed frog
AAH67637  343 YTSGPGAATIYPAAGGSDDWAYDlGVKYSYTFELRDeGRYGFLLPESQIKPTCEETMLAVKYIANHVL 410 zebrafish
P15088    346 YIYGPIESTIYPISGSSLDWAYDlGIKHTFAFELRDkGKFGFLLPESRIKPTCRETMLAVKFIAKYIL 413 human
OCT80939  359 YTYGPSASTIYPTAGSSDDWAYSvGIKYSFTFELRDkGKKGFLLPQSQIKATCQESTLAVAYIAKYVL 426 African clawed frog
OCT80938  348 YTHGPIATTIYPVSGSSIDWTYDkGIKYSFVFELRDeGDFGFLLPECQIKQTCMETMLAVKAMANSVV 415 African clawed frog
5LRG_A    236 YTYGPGATTIYPAAGGSDDWAYDqGIKYSFTFELRDkGRYGFILPESQIQATCEETMLAIKYVTNYVL 303 pig

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