2E9G,3MNM,1GYU,1P4U,3HS8,3H1Z


Conserved Protein Domain Family
Alpha_adaptinC2

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smart00809: Alpha_adaptinC2 
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Adaptin C-terminal domain
Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Gamma-adaptin is a subunit of the golgi adaptor. Alpha adaptin is a heterotetramer that regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This Ig-fold domain is found in alpha, beta and gamma adaptins and consists of a beta-sandwich containing 7 strands in 2 beta-sheets in a greek-key topology.. The adaptor appendage contains an additional N-terminal strand.
Statistics
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PSSM-Id: 197886
Aligned: 103 rows
Threshold Bit Score: 44.1563
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2E9G_A        18 VFEREGVQLNLSFIRPPENpalLLITITATNFSEGDVTHFICQAAVPKSLQLQLQAPSG-NTVPARGglPITQLFRIL-- 94   human
CAG08478     684 AMKAKGLEISGTFSRRAGV---IQMEMTLTNKAMSVMTDFAIQFNKNSFGLSPAGPLQVlTPLSPNQ--TVEATLPLS-- 756  spotted green ...
NP_001080473 731 AVKAKGLEISGTFSHRQSH---IYMDMTFTNKALQHMTDFAIQFNKNSFGVIPSAPLAIhTPLMPNQ--SIEISLPLN-- 803  African clawed...
XP_002743692 725 AMKAKGLEISGTFTRQVGS---ISMDLQLTNKALQVMTDFAIQFNRNSFGLAPAAPLQVhAPLSPNQ--TVEISLPLS-- 797  white-tufted-e...
NP_001022937 736 ASKAMGMQVEGTFVRRGGK---IFMEMTITNRAMQAISGFALQFNKNSFGLIPVEQVNP-APILPNQ--S--QNYTIA-- 805  nematode
XP_002641526 733 ASKAMGMQVEGTFVRRNGR---ISMEITITNRAMQAISEFALQFNKNSFGLIPVEQMDQ-SPILPNQ--S--KNFTIV-- 802  Caenorhabditis...
NP_194077    672 ASKGQGLQISAQLTRQDGQ---VFYSMLLENNSQSLLDGFMIQFNKNSFGLAAVGSLQV-PPLQPGA--SARTMMPMV-- 743  thale cress
NP_001190701 695 ASSGQGLQISAQLSRKDGQ---VFYSMLFENNSQSVLDGFMIQFNKNTFGLAAAGSLQI-PPLHPAT--SARTMLPMVlf 768  thale cress
XP_002743697 703 TLSGSYVAPKAVGS--------ISMDLQLTNKALQVMTDFAIQFNRNSfgLAPAAPLQVhAPLSPNq--tVEISLPLS-- 770  white-tufted-e...
NP_001022939 736 ASKAMGMQVEGTFVRRGGK---IFMEMTITNRAMQAISGFALQFNKNSfgLIPVEQVNPaPILPNQs-----qNYTIA-- 805  nematode
2E9G_A        95 -NPNKAPLRLKLRLTYDHFHQSVQEIFEVNNLP 126  human
CAG08478     757 -NVGP---VMKMEPLTNLQV-AIKNNIDIFYFS 784  spotted green pufferfish
NP_001080473 804 -TLGP---VMKMEPLNNLQV-AVKNNIDVFYFS 831  African clawed frog
XP_002743692 798 -TVGS---VMKMEPLNNLQV-AVKNNIDVFYFS 825  white-tufted-ear marmoset
NP_001022937 806 -CDTTGAVQVTTPLTNLQ--VAIKNDINAFYFA 835  nematode
XP_002641526 803 -CDTSGPVQVTTPLTNLQ--VAIKNNINAFYFA 832  Caenorhabditis briggsae
NP_194077    744 -LSQNMS---TGSTSSVLQVAVKNNQQPVWYFe 772  thale cress
NP_001190701 769 qNMSAGP------PSSLLQVAVKNNQQPVWYFt 795  thale cress
XP_002743697 771 -TVGS---VMKMEPLNNLQ-VAVKNNIDVFYFS 798  white-tufted-ear marmoset
NP_001022939 806 -CDTTGAVQVTTPLT-------------NLQVS 824  nematode
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