2DZI


Conserved Protein Domain Family
Ubl_UBL4A_like

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cd01807: Ubl_UBL4A_like 
Click on image for an interactive view with Cn3D
ubiquitin-like (Ubl) domain found in ubiquitin-like proteins UBL4A and similar proteins
UBL4A, also termed GdX, is a ubiquitously expressed ubiquitin-like (Ubl) protein that forms a complex with partner proteins and participates in the protein processing through endoplasmic reticulum (ER), acting as a chaperone. As a key component of the BCL2-associated athanogene 6 (BAG6) chaperone complex, UBL4A plays a role in mediating DNA damage signaling and cell death. UBL4A also regulates insulin-induced Akt plasma membrane translocation through promotion of Arp2/3-dependent actin branching. Moreover, UBL4A specifically stabilizes the TC45/STAT3 association and promotes dephosphorylation of STAT3 to repress tumorigenesis. UBL4B is testis-specific, and encoded by an X-derived retrogene Ubl4b, which is specifically expressed in post-meiotic germ cells in mammals. As a germ cell-specific cytoplasmic protein, UBL4B is not present in somatic cells. Moreover, UBL4B is present in elongated spermatids, but not in spermatocytes and round spermatids, suggesting its function is restricted to late spermiogenesis. The function of UBL4A may be compensated by either UBL4B or other Ubl proteins in normal conditions. Both UBL4A and UBL4B contain a conserved Ubl domain with a beta-grasp Ubl fold, a common structure involved in protein-protein interactions.
Statistics
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PSSM-Id: 340505
Aligned: 11 rows
Threshold Bit Score: 115.923
Created: 9-Jun-2017
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
key conservedkey conserved
Conserved site include 1 residue -Click on image for an interactive view with Cn3D
Feature 1: key conserved lysine K27, 1 residue position
Conserved feature residue pattern:[KR]Click to see conserved feature residue pattern help
Evidence:
  • Comment:K27 (Ub numbering) is a lysine conserved in the Ubl_ubiquitin_like family; it is one of 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering); may have other functions, for example for NEDD8 it is involved in the mechanism of protein neddylation

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    #                                              
2DZI_A         8 MQLTVKALq--GRECSLQVpedeLVSTLKQLVSEKLNv-PVRQQRLLFKGKALADgkrLSDYSIGPNSKLNLVVK 79  human
Q0D261         1 MQLTVKALk--GKEAHIQVsegdTVLAVKRLVEEKLQv-PVSQQRLLFRGKSLADehcLSHYSIGPGSRLNLMVK 72  African clawed frog
KXJ14373       1 MKIKVKILk--GQEITIEVsqtePVLAVKRVVAQQMDv-PVEAQRLVFKGKTLTDsgcLHDHGVKEGDKIHLFVK 72  Exaiptasia pallida
Q7ZWB2         1 MILTVKPLq--GKECNVQVteneKVSTVKELVSERLNi-PASQQRLLYKGKALADehrLSDYSIGPEAKLNLVVR 72  zebrafish
XP_007072428   1 MLLTVKALq--GRGCSLQVspdeRVSTLKRLVSEKLNv-PVSQQRLLFKGKALADehrLSDYSIGPESKLNLVIK 72  green sea turtle
XP_014349650   1 MLLTVKLLq--GKECNLQVseneSVSTVKTLVSEKLSi-PVSQQRLLYKGKALADehrLSDYSIGPDSKLNLVIK 72  coelacanth
XP_006825369   1 MLIYVKVLqskGKECSIEVsstdTVLFVKQCIAVQFNv-PVLQQTLVFRGKTLADdqcLSYYDIEPDTKIHLVIK 74  Saccoglossus kowalev...
XP_791815      1 MLLIVKILqapGKECRIEVtdveSIVSVKRMVAREFDv-PVHLQRLVFRGKTLADgqsLDFYKIGPGTKIHLVVR 74  purple sea urchin
XP_002594764   1 MFITVKILq--GRECCIEVadadSVMSVKQLVARELDv-PVDQQRLVFRGKTLADsqsLGDYNIGPDAKIHLMVR 72  Florida lancelet
KOF77950       1 MNINVKILk--GRECTVKIspsdSIQKLKELIAVQMDi-PVGQQKLVYQGKNLSDektINSYQIPENGKVFLVTK 72  Octopus bimaculoides
EFX74412       1 MKIIVKPLt--EKEFEVEVnpecNVEHLKQLIERRCNmpGVQQQRLVHLGKTLTDgssLSTYKLAEGSKIHLFTK 73  common water flea

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