2CSZ


Conserved Protein Domain Family
FYVE_Slp4

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cd15764: FYVE_Slp4 
Click on image for an interactive view with Cn3D
FYVE-related domain found in synaptotagmin-like protein 4 (Slp4) and similar proteins
Slp4, also termed exophilin-2, or granuphilin, has been characterized as a regulator of the release of insulin granules from pancreatic beta-cells and dense core granules from PC12 neuronal cells by binding to Rab27A , and amylase granules from parotid gland acinar cells through interaction with syntaxin-2/3 in a Munc18-2-dependent manner on the apical plasma membrane. It can binds to syntaxin 2 in parotid acinar cells. It is also involved in granule transport by recruitment of the motor protein myosin Va. Moreover, it requires Rab8 to increase granule release in platelets. Slp4 contains an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains. The Slp homology domain (SHD) consists of two conserved regions, designated SHD1 (Slp homology domain 1) and SHD2, which may function as protein interaction sites. The SHD1 and SHD2 of Slp4 are separated by a putative FYVE zinc finger, which resembles a FYVE-related domain that is structurally similar to the canonical FYVE domains but lacks the three signature sequences: an N-terminal WxxD motif (x for any residue), the central basic R(R/K)HHCRxCG patch, and a C-terminal RVC motif.
Statistics
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PSSM-Id: 277303
Aligned: 7 rows
Threshold Bit Score: 70.5811
Created: 2-May-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C C C C CClick to see conserved feature residue pattern help
Evidence:
  • Structure:2CSZ; Homo sapiens synaptotagmin-like protein 4 binds two Zn2+ ions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #  #             #  #    #  #           #  #  
2CSZ_A        23 YSDRTCARCQESLGrlsPKTNTCRGCNHLVCRDCRIQesn-gtWRCKVCSG 72  human
NP_001086460  63 YSERACARCKNNMGriaPKANTCRGCNHLVCKECRMEstg-ggWKCNVCSK 112 African clawed frog
CAG09849      61 YSQRSCGRCLESMSilsAFSSQCKMCKHDVCQSCRTVfsn-gsWLCSVCAK 110 spotted green pufferfish
NP_001074457  60 YSERSCGRCQEPLSllsGSGSQCRSCKHQVCKKCQSVrpn-gsWVCTVCAK 109 zebrafish
AFJ51576      57 YSERTCARCQQSLGrvsPKANTCRGCNHLVCRDCRAYsad-srWRCKVCAK 106 eastern diamondback rattlesnake
XP_006633088  61 YSRRACGRCQEPLGrlsVGSSRCRSCNHLVCRRCQVVrggggsWACSVCAK 111 spotted gar
XP_007232958  61 YSTRSCGRCQQPMGrlgSRTNQCPVCKHEVCQNCHAVrpn-raWVCSVCAK 110 Mexican tetra

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