1SGV


Conserved Protein Domain Family
TruB

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COG0130: TruB 
tRNA U55 pseudouridine synthase TruB, may also work on U342 of tmRNA [Translation, ribosomal structure and biogenesis]
tRNA U55 pseudouridine synthase TruB, may also work on U342 of tmRNA is part of the Pathway/BioSystem: tRNA modification
Statistics
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PSSM-Id: 439900
Aligned: 725 rows
Threshold Bit Score: 237.257
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1SGV_A         7 GIVVIDKPAGMTSHDVVGRCRRIFA----TRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAPKSYAATIRLGQTTST 82 
WP_012359227   3 GFFLVHKPSQLTSHDVVYQIKKKFH----LDKVGHTGTLDPLASGLLIVCVGKATKLSFLFDGLDKTYQGTFIFNRKYDT 78 
WP_044278779  10 AFLAIDKPSGITSFAVIRRLRKITG----SKKIGHTGTLDPFATGLLICCLGSYTRLAGLLEEKDKTYLARMILGIKTAT 85 
WP_081719542  14 GLILIHKPPGITSFQLLSPLKKALG----IKKVGHAGTLDKFASGLMLVFAGQGTRFVQYLSNMDKRYHATIEFGKETET 89 
WP_011160612   3 GFFLVNKPEKMTSHDVVFQIKKKFH----FDKVGHTGTLDPLASGLLIICVGKATKLAFLFDKLPKTYQGTFLFNKHYDT 78 
WP_012422550   3 GIILLNKRIGITSCDTLFPLKRYFS----TSRVGHTGTLDKFASGLLVVLVGKYTKLSNYITSLDKEYISEFEFGIETDT 78 
WP_014269118   6 SILLVNKPSGITSFSSLNTIKRTVD-----PKVGHAGTLDKFAQGLMVALTGSMTKLNVLFSTMDKRYRATICFGSETDT 80 
WP_075573497   9 GLILIDKAEGITSYDVIRKIKKILKelniKTKIGHAGTLDPFATGLLVVLLGRYTRLSDYIMDASKVYSGIVDIGNATDT 88 
WP_106720988   3 GFLLVDKPKDMTSHDVVLYLKRKFR----IKKIGHTGTLDPFASGLLILCIGKATKLSDLFMNMNKSYEGTFVFNKHYDT 78 
NP_212937      4 GFLLINKEQGKTSFETLFPIKKYFN----TNRVGHAGTLDKFASGILVCLVGKYTKLSGYFTSLDKEYVAEFRFGLETDT 79 
1SGV_A        83 EDAEGQVLQSVP-AkH-LTIEAIDAAMERL-RGEIRQVP-SSVSAIKVGGRRAYRLARQGRSVQLEARPIRIDRFELLA- 157
WP_012359227  79 LDVTGKLLDTK--VnI-LNQQLIQKTFASFhQKSYFQTP-PMFSAIKVNGQKMYHLARKNKIIDLPPKKVMINHLETQSl 154
WP_044278779  86 GDPEGDIMQTAP-IpEfVS--KL-DVLAKk-ARQLTELPvPAYSAVKVNGKRAYELARKGEKFNLPKRPVQIKEVEFLP- 159
WP_081719542  90 LDPEGEVIATAE-Ip---DGSRLEEVLSRF-RGDLDQVP-PKYSAVHVDGQRAYKRSLKGDDFDIPSRRIVIHSLEIRD- 162
WP_011160612  79 LDVTGKLLDTKN-Tp--LTDCNIQKSFASFhQKKYLQIP-PMFSAVKIKGKKMYRLARKNQVVDIPPREVFIHHFEKTSl 154
WP_012422550  79 LDPNGRIANRTDyIp---NLEELSLGIRSF-IGEIYQIP-PKFSSVHVKGKRAYKLALSGEYFELQPRKVNIYDIQILN- 152
WP_014269118  81 LDPEGEIVATSP-Ip---SYDEIQQAMKTF-IGEIEQQP-PQYSALHIDGKRASALAREGKMVEMASRPVTIYSFEPVS- 153
WP_075573497  89 GDLTGKVIESKT-VtE-DEVNNLIVNSINY-IGNFMQTP-PQYSALKHNGKPLYEYARKGEYVHKDPRPIKVKSFEMk-- 162
WP_106720988  79 YDVTGQILKTKDq--N-IDEVTLKNAVHDM-IKPYDQLP-PMYSAIKIDGKKLYEHARAGVEIKRETRPVEIYDFKLTSk 153
NP_212937     80 LDPNGRIVSKTDyIp---NVEDIDLKLKDF-VGEIYQSP-PRFSSVHIDGSRAYKLALNGKFFEIKKRKVTVYNIQRLS- 153
1SGV_A       158 ARrrdqLIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRRTRVGRFELDQARSLDDLAE-----RPALSLSLDEAc 232
WP_012359227 155 LK----NDQIDFLTTVSKGTYIRSLAQDIASKMNTYGALLSLKRVAIGLYLLQNAKTVDDLTRd-------DFILDSSL- 222
WP_044278779 160 WEpn-kSDELSYRCKVGKGTYIRALSEWLAEQLNTIAYTTFLRRESIGNITLQDAVSLDDLTKd---nWFRYQLSYKKV- 234
WP_081719542 163 WN----PPRGDFDIHCSKGTYIRSLARDLGLAAGSRAYVERLQRTTVGEFHLDEALTLDEIREkggewVIDQMICGSDL- 237
WP_011160612 155 FC----RDQVDFLAHVSKGTYIRSLARDLALQLNTYGALLRLQRTAIGTHLLQNAKTIENLELn-------DLILDSTF- 222
WP_012422550 153 YNv--dSRILKLQIKCSKGTYVRSIARDLALSLGSFAYVKSLERIKIGDFRLDNACFCEDFNSn-------SLMSLESL- 222
WP_014269118 154 FD----GCNLVADVHVSKGTYIRSLARDLALACNSRAHLVDLVRTQIGPFLLEEAVCSDDRKAlv-----eSMGNTDSL- 223
WP_075573497 163 RE----NCQVTFRTEVSKGTYVRTLVEDYCKEYGVPANLKTLRRESSGSLNLEKAIGIDELNPd---nFYQSILKIDDI- 234
WP_106720988 154 LN----IDTIDFSIDVSKGTYIRSVAVDLADALDTYGALKELRRTKIGPYHIKQAKPLNDIMEs-------DIISLEAY- 221
NP_212937    154 YDf--sSSLLSLKISCSKGTYIRSIARDLAYSLNSCAYVSNLKRTKVGMFRLKDSTLCENLSKa-------SLISLESL- 223
1SGV_A       233 LLMFARRD---LTAAEASAAANG-----RS-----LPA-Vg-----I---DGv---Y-AACd-ADgrVIALLRDE-GSR- 283
WP_012359227 223 FESCDKII---LNDYLIKLVQNGvyldqRQ-----TTTe-----------KP----F-IVQd-SNhnLIAYYDVLeKNK- 276
WP_044278779 235 FPDYTCLK---LNADDFAKVMNG-----MD-----IAH-Sne-------nNEk--yI--LL--KEenICAIGQRMnNy-- 285
WP_081719542 238 IRRIPGFQlfqADSDLARRIRLG-----KD-----LYF-RelgapliersGDsppqIfAVMd-EYdqLAALFQA--GGd- 302
WP_011160612 223 FAAYDELI---LNDYLIKLVKNGthldqRQ-----ITTk-----------KP----F-IVKd-SNknFVAYYDTLdENK- 276
WP_012422550 223 -GLFEKIY---VDNSMIKLIRNG-----AY-----INV-Vin-------vGE----F-KILksYNeeILAIICGi--G-- 271
WP_014269118 224 MKRVPSLSvleIEDSDLFSVGNG-----RYpdrysV-VrQna-------dDTy---A-AVYs-KDgiLRCVVNLD-EqRi 284
WP_075573497 235 KTSYKRMD---LDKDSVDKLFNG-----IR-----IES-Sle------dqGP----L-LLs--SVgkVFALGEIK-EGL- 285
WP_106720988 222 FKNHPKII---LNDYMIKLVKNG-----VY-----LDE-Rq-----TtidQD----F-IVYd-EQghMIAFYQRVkENT- 275
NP_212937    224 -KSFEKVY---IDSNKINLVKNG-----VY-----FEI-Ein-------iNE----F-KILksREekILAVIQGv--G-- 272
1SGV_A       284 ---T-RSV------AVL-RP 292
WP_012359227 277 ---Y-YPR------YFFk-- 284
WP_044278779 286 ---I-HPL------MVL-K- 293
WP_081719542 303 ---I-QPQtrltyrGVFhKL 318
WP_011160612 277 ---Y-YPR------YFF--- 283
WP_012422550 272 ---LnKYKy----iIIF--- 281
WP_014269118 285 iaqI-HPSm----qR----- 294
WP_075573497 286 ---I-RTI------CFLgdk 295
WP_106720988 276 ---Y-KPS------LIF--- 282
NP_212937    273 ---LnKYKy----vIIF--- 282
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