1U3E,7CEI


Conserved Protein Domain Family
HNHc

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smart00507: HNHc 
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HNH nucleases
Statistics
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PSSM-Id: 214702
Aligned: 98 rows
Threshold Bit Score: 27.0369
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1U3E_M        49 KGKTFQVHR-LVAIhFCEGYee---------glVVDHKDGNKDNNLSTNLRWVTQKINV 97  Bacillus phage SP01
O80140        43 KGKRMYVHR-LVMLaFHGKSd-----------lTVDHLNMNKQDNRLENLEYVTAVENI 89  Lactococcus phage bIL170
Q84408       135 AGKIVLIHQlMGETrFVPKPygmp------snwTVHHIDNDPSNNHCDNLVWASPETQR 187 Paramecium bursaria Chlorella virus 1
Q84408       329 DGKELKFHR-KVVElFFGKLpktveingkthhlIVDHIDDDKQNARLDNLQLLTNQENS 386 Paramecium bursaria Chlorella virus 1
Q38419         1 -----MNYR-KIWIdANGPIpkdsd----grtdEIHHKDGNRENNDLDNLMCLSIQEHY 49  Enterobacteria phage RB3
AAP33980      38 TGKVVYCHR-VMs--NAPKg------------sTVLHSCDNPLCCNPEHLSIGTPKENS 81  T7
NP_848293     22 NGKLVTPHR-HIYEeTYGPVpt---------giVVMHICDNPRCYNIKHLTLGTPKDNS 70  Yersinia pestis phage phiA1122
NP_041974      8 FYKAPRRHI-QVWEaANGPIpk---------gyYIDHIDGNPLnDALDNLRLALPKENS 56  T7
YP_001285879  53 KAYEFRLNR-LVAAaFIGQPske--------knTVNHINGIKTDNRAVNLEWASRSEQM 102 Lactobacillus phage LL-H
AAC96790     233 ISKKEVPI--HILV-WKTFMgdip------egvIINHKDHNKQNASLDNLEILTRSENA 282 PBCV-1
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