3VPD


Conserved Protein Domain Family
LysX_arch

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TIGR02144: LysX_arch 
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Lysine biosynthesis enzyme LysX
The family of proteins found in this equivalog include the characterized LysX from Thermus thermophilus, which is part of a well-organized lysine biosynthesis gene cluster. LysX is believed to carry out an ATP-dependent acylation of the amino group of alpha-aminoadipate in the prokaryotic version of the fungal AAA lysine biosynthesis pathway. No species having a sequence in this equivalog contains the elements of the more common diaminopimelate lysine biosythesis pathway, and none has been shown to be a lysine auxotroph. These sequences have mainly recieved the name of the related enzyme, "ribosomal protein S6 modification protein RimK". RimK has been characterized in E. coli, and acts by ATP-dependent condensation of S6 with glutamate residues.
Statistics
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PSSM-Id: 273994
Aligned: 8 rows
Threshold Bit Score: 387.524
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3VPD_A         2 LAILYDRIRPDERMLFERAEALGLPYKKVYVPALPMVLGERPEALEGVTVALERCVSQSRGLAAARYLTALGIPVVNRPE 81  Thermus thermop...
BAC67243       2 LAILYDRIRPDERMLFERAEALGLPYKKVYVPALPMVLGERPKELEGVTVALERCVSQSRGLAAARYLTALGIPVVNRPE 81  Thermus thermop...
WP_009990384   3 IGILYDMPRWEEKNLIEEGKKLGYQVATIYSKDFVLFSNDFTID-NDTDLFIQRNVSHNRALITSFLVEQVGYPVINDHT 81  Sulfolobus solf...
WP_010888824  11 LAVLYDRVRPDEKMLFGALDELGVPYDKVYTPQLTVTFDDEGRARVPWKVAIERCVSQSRGHAVTRALEGFGVKVINPSH 90  Deinococcus rad...
WP_009991181   3 IALVVDIIRQEEKLIIKALNERQIDYDVINVGQEPIPFN---KALSKYDVGIIRPVSMYRALYSSAILEAAGVHTINSTD 79  Sulfolobus solf...
WP_010885785   3 IGITYTILRKEELMIRENAERFG---ETVMLHEDNVRFP----YKYDLDVVIIRNVSYFKALYLAKLFEEHGVPTVNPFS 75  Pyrococcus hori...
WP_010866389   7 ILFLYDIARLDEKMLLEELRKRAR-VRVIHTAARALPLGEPPREAEEADLAVARGVSGRRLLYSALAAESWGLETVNSSH 85  Aeropyrum pernix
WP_011007818   1 ------MARLDEKLLLNELRSLGLQVRPLNIEEVAAPEG-LG------EVGVIRLAARSRVIPMAFTYEHSGGVAINNAM 67  Pyrobaculum aer...
3VPD_A        82 VIEACGDKWATSVALAKAGLPQPKTALATDREEALRLMEAFGYPVVLKPVIGSWGRLLAKVTDRAAAEALLEHKEVLGGF 161 Thermus thermop...
BAC67243      82 VIEACGDKWATSVALAKAGLPQPKTALATDREEALRLMEAFGYPVVLKPVIGSWGRLLAKVTDRAAAEALLEHKEVLGGF 161 Thermus thermop...
WP_009990384  82 TLIRCENKIFTTYILARHNIPTPKTFIAFDKTNAIEYSKKLGYPVVIKPVEGSWGRMVAKADNLDVLYSYLEYQEFSTQK 161 Sulfolobus solf...
WP_010888824  91 VIELCGDKLATNARLAAAGLPTPRTGVAFDGESALGLIEEMGYPVVLKPTVGSWGRMVSRLNDRDAAEAVIEHKEVLGGP 170 Deinococcus rad...
WP_009991181  80 AIGTCGDKILTYSKLFKHGIPIPDSIIAASPDAAMKAYEQMGFPLIDKPPIGSWGRMVSLIRDVYEGKTIIEHREMLNNS 159 Sulfolobus solf...
WP_010885785  76 IMLEAGDKVFSTLKLSKK-VPVPRWGVSFSENSAKKIAEELGYPIVSKPVFGSWGRLLAKINDKDSLEGLLEHKKWMKNP 154 Pyrococcus hori...
WP_010866389  86 AIMASQDKVWSHMLLSRRGVPTPRSYTILDPQAVPYAAEAIGFPAVFKPARGSWGKLVSLLRDKSEASLLSEALEYVQG- 164 Aeropyrum pernix
WP_011007818  68 SLILSHDKYFTYLKLKEARVPTPETYLVFGREAAKEVARRLGYPVIVKPTDGSWGRFVNLVKSAEDLES-LILQKAAMDS 146 Pyrobaculum aer...
3VPD_A       162 QHQLFYIQEYVEKPGRDIRVFVVGERAIAAIYRRS--AHWITNTARGGQAENCPLTEEIARLSVGAAEAVGGGVVAVDLF 239 Thermus thermop...
BAC67243     162 QHQLFYIQEYVEKPGRDIRVFVVGERAIAAIYRRS--AHWITNTARGGQAENCPLTEEVARLSVKAAEAVGGGVVAVDLF 239 Thermus thermop...
WP_009990384 162 YKDIYYIQEFVNKPNRDIRIFVIGDETPVGIYRVNe-NNWRTNTALGAKAYPLKIDEELRELALKVKDIIGGFFLGIDIF 240 Sulfolobus solf...
WP_010888824 171 QHGVFYVQELINKPGRDIRAFVVGGQGIGAIYRTS--EHWITNTARGAKASNCEVTPAIADLAQRAAAAVDGQIVAIDLV 248 Deinococcus rad...
WP_009991181 160 ALKVHIIQEYIKYKERDIRCIVIGDELLGCYARNIppNEWRANVALGGNPTPIQLDDNIRELAVKSVKLVKGEFVSIDIL 239 Sulfolobus solf...
WP_010885785 155 LYNIHYFQEFIQKPGRDIRSYVIGGEFITAIYRYS--DHWITNTARGGRAEPCD-NSEVEEISIKAWEAFGDGALAIDIF 231 Pyrococcus hori...
WP_010866389 165 DLKLGLVQEYVDKPGRDIRSFCIGDTVPAAIYRYG--SGFATNLAAGGRAAPAPVTGDVEDLTLRACEALGVEVGGVDIV 242 Aeropyrum pernix
WP_011007818 147 HMHLYLVQEFINKPNRDIRVTVVGDRAVAAIYRITn-GDWRTNTARGGKAEPVKIDPELEDVAVRASKAVGAYYSGVDVV 225 Pyrobaculum aer...
3VPD_A       240 ES-Er-----GLLVNEVNHTMEFKNSVHTTGVDIPGEILRYAWEVAR 280 Thermus thermophilus
BAC67243     240 ESeR------GLLVNEVNHTMEFKNSVHTTGVDIPGEILKYAWSLAS 280 Thermus thermophilus HB8
WP_009990384 241 EDkDr-----GYLVDEVNGVPEYKNTVRVNNFNVSKFLLEKAAEWVK 282 Sulfolobus solfataricus
WP_010888824 249 EDpArqndwdGLVIIEINHTMEFKNSVSTTGVNIPRLMGEYAVSLLG 295 Deinococcus radiodurans
WP_009991181 240 EHkSk-----GYVINELNDVPEFKGFMLATGINVAEKLVDHIVKTYR 281 Sulfolobus solfataricus
WP_010885785 232 ESpN------GLLVNEVNPNMEFKNATRVTGVNIAEKLVEYAVEVAK 272 Pyrococcus horikoshii
WP_010866389 243 EStRd----gGLLVLEVNPSTEFKNTVRVTGVNVAALIADYVVSRVR 285 Aeropyrum pernix
WP_011007818 226 ES-Er-----GYLVLEVNGVPEFKNVQRVTGVNVAGEIARLVAEFVK 266 Pyrobaculum aerophilum
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