5D3A,5NFD


Conserved Protein Domain Family
Rcc_KIF21A

?
cd22263: Rcc_KIF21A 
regulatory coiled-coil domain found in kinesin-like protein KIF21A
KIF21A, also called kinesin-like protein KIF2 or renal carcinoma antigen NY-REN-62, is a microtubule-binding motor protein involved in neuronal axonal transport. It works as a microtubule stabilizer that regulates axonal morphology, suppressing cortical microtubule dynamics in neurons. Mutations in KIF21A cause congenital fibrosis of the extraocular muscles type 1 (CFEOM1). In vitro, it has a plus-end directed motor activity. This model corresponds to the regulatory coiled-coil domain of KIF21A, which folds into an intramolecular antiparallel coiled-coil monomer in solution, but crystallizes into a dimeric domain-swapped antiparallel coiled-coil.
Statistics
?
PSSM-Id: 410204
Aligned: 8 rows
Threshold Bit Score: 118.877
Created: 30-Jul-2020
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
 
homodimer
Conserved site includes 41 residues -Click on image for an interactive view with Cn3D
Feature 1:homodimer interface [polypeptide binding site]
Evidence:
  • Structure:5D3A: Homo sapiens KIF21A regulatory coiled-coil domain forms a homodimer; contacts at 4A

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1            ##  ## ##  ## ##  ## ##  ## ##  ##  #  ##       ## ##  ## ##  ## ##  ## ##  #
5D3A_A          1 GSMTISNMEADMNRLLKQREELTKRREKLSKRREKIVKENGEGDKnv--aNINEEMESLTANIDYINDSISDCQANIMQM 78   human
5NFD_A          1 GSMTISNMEADCNRLLKQREELTKRREKLSKRREKIVKENGEGDKnv--aNINEEMESLTANIDYINDSISDCQANIMQM 78   human
Q7Z4S6        936 QKMTISNMEADMNRLLKQREELTKRREKLSKRREKIVKENGEGDKnv--aNINEEMESLTANIDYINDSISDCQANIMQM 1013 human
XP_014347765  916 QRMTIANMEADMNRLLKQREELTKRRDKISKKREKIIKEHGDVDKtv--hNVNEELESLTANIDYVNDNISECQANIMQM 993  coelacanth
XP_007884212   73 QRMTIANMETDMNRLLKQREELTKRLDKVTRRREKFQQECADGDKai--hNINEEIESLSANIDYINDSISDCQANIMQM 150  elephant shark
XP_018106902  917 QRMTISNMEVDMNRMLTQREELTKRKEKVTKKRDRIIKESGDVDKni--hSLSEEIESLNANIDYLNDSISDCQASIMQM 994  African clawe...
XP_005163243  917 QRMTISNMEADMNRLLKQREELTRRRDKISRKRERLLADDPEVEKhl--qPVNEELESLLANIDYINDSISDCQANIMQM 994  zebrafish
XP_015131283  931 QRMTISNMEADMNRLLTQREELTRRREKLSKKREKLIKDGGGSEAdrnvqNINEEMESLTANIDYINDSISDCQANIMQM 1010 chicken
Feature 1         #   
5D3A_A         79 EEAK 82   human
5NFD_A         79 EEAK 82   human
Q7Z4S6       1014 EEAK 1017 human
XP_014347765  994 EEAK 997  coelacanth
XP_007884212  151 EEAK 154  elephant shark
XP_018106902  995 EEAK 998  African clawed frog
XP_005163243  995 EEAK 998  zebrafish
XP_015131283 1011 EEAK 1014 chicken

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap