5K31,4AE2


Conserved Protein Domain Family
COLFI

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pfam01410: COLFI 
Fibrillar collagen C-terminal domain
Found at C-termini of fibrillar collagens: Ephydatia muelleri procollagen EMF1 alpha, vertebrate collagens alpha(1)III, alpha(1)II, alpha(2)V etc.
Statistics
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PSSM-Id: 460199
Aligned: 20 rows
Threshold Bit Score: 349.332
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5K31_A         18 RDLEVDTTLKSLSQQIENIRSPEG-SRKNPARTCRDLKMCHSD----WKSGEYWIDPNQGCNLDAIKVFCNMET-GETCV 91  
NP_001029004  603 RDEEMMVVLKELTNSVENIKAPRGvSKKTAARSCMDIYLAEQQqnivAKNGIRWIDPNGGCTADGIEVYCNFDT-METCV 681 
NP_001073461 1463 GMEEIFGSLNSLRQEIESMRFPLG-TKESPGRTCQDLHLSQPD----LKDGEYWIDPNQGCARDSFKVYCNFTAgGETCL 1537
XP_016790449 1512 glEEVLASLTSLSLELEQLRRPPG-TAERPGLVCHELHRNHPH----LPDGEYWIDPNQGCARDSFRVFCNFTAgGETCL 1586
P20908       1607 GMEEIFGSLNSLKLEIEQMKRPLG-TQQNPARTCKDLQLCHPD----FPDGEYWVDPNQGCSRDSFKVYCNFTAgGSTCV 1681 human
P12107       1575 GMEEIFGSLNSLKQDIEHMKFPMG-TQTNPARTCKDLQLSHPD----FPDGEYWIDPNQGCSGDSFKVYCNFTSgGETCI 1649 human
CAG01332     1419 tDAGVHATLKTLRRRLSDLRSPDG-SRMDPAKTCQDLRHSHPD----KKSGEYWIDPDGGSAKDAIRVFCNMEA-GETCI 1492
EAX10907      651 tDPGVHATLKSLSSQIETMRSPDG-SKKHPARTCDDLKLCHSA----KQSGEYWIDPNQGSVEDAIKVYCNMET-GETCI 724 
CAF98967      148 vdPGILATLKALSSQISNMKSPDG-SRKHPARTCDDLKRCYPM----KKSGEYWVDPNQGSVEDAIQVHCNMDT-GETCI 221 
4AE2_A         20 ntdEIMTSLKSVNGQIESLISPDG-SRKNPARNCRDLKFCHPE----LKSGEYWVDPNQGCKLDAIKVFCNMET-GETCI 93  
5K31_A         92 YPTQPSVA-QKNWYISKNpkdkRHVWFGESMTDGFQFEY---GGQGSDPADVAIQLTFLRLMSTEASQQITYHCKNSVAY 167 
NP_001029004  682 YPTNRHIE-NGTHYTGES----RHVYYGEEMATGSTVRYdpsDEDRVPHADYTSQLTFLRLLSRQVKQHVTFYCRNMVAY 756 
NP_001073461 1538 YPSKAVENvKMNSWIKEK----PGSLFSQFAKGNK-FSY----VDSVGEAVGVVQLGFLRLLSVQARQNLTYHCQRSVAW 1608
XP_016790449 1587 YPDKKFEIvKLASWSKEK----PGGWYSTFRRGKK-FSY----VDADGSPVNVVQLNFLKLLSATARQNFTYSCQNAAAW 1657
P20908       1682 FPDKKSEGaRITSWPKEN----PGSWFSEFKRGKL-LSY----VDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAW 1752 human
P12107       1650 YPDKKSEGvRISSWPKEK----PGSWFSEFKRGKL-LSY----LDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAW 1720 human
CAG01332     1493 SASPANIP-RKSWWTKASpsssKPVWFGSDMNAGSRFQY---GHGDELGNTAAVQLKLLQLLSTESHQNITFHCRNTVAY 1568
EAX10907      725 SANPSSVP-RKTWWASKSpd-nKPVWYGLDMNRGSQFAY----GDHQSPNTAITQMTFLRLLSKEASQNITYICKNSVGY 798 
CAF98967      222 SANPPSIP-RKVWWNTSKn---KPVWFGADINRGTHFVY---GNKDQLANTITVQMTFIRLLSKEASQTITYHCKNSVAY 294 
4AE2_A         94 SANPLNVP-RKHWWTDSSae-kKHVWFGESMDGGFQFSY---GNPELPEDVLDVQLAFLRLLSSRASQQITYHCKNSIAY 168 
5K31_A        168 MDQQT-GNLKKALLLQGSNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKSSRLPIIDVAPLDVGAPDQEFG 246 
NP_001029004  757 YDAAA-DNKAQALKLRGFGDAEFTAEGDPSTTYRVLHDGCTGRPSTWGKTDIEFTTGFVGRMPITDIAPFDIGGADQQFG 835 
NP_001073461 1609 TDQTTdGGYKRALRLQGANDEEISYE--TSPYIKALIDGCSYRKGL-DRTVLEVNTPQVEQLPLLDIRISDFGEDNQKFG 1685
XP_016790449 1658 LDEAT-GDYSHSARFLGTNGEELSFNQTTAATVSVPQDGCRLRKGQ-TKTLFEFSSSRAGFLPLWDVAATDFGQTNQKFG 1735
P20908       1753 QDAAT-GSYDKALRFLGSNDEEMSYD--NNPYIRALVDGCATKKGY-QKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFG 1828 human
P12107       1721 YDVSS-GSYDKALRFLGSNDEEMSYD--NNPFIKTLYDGCASRKGY-EKTVIEINTPKIDQVPIVDVMINDFGDQNQKFG 1796 human
CAG01332     1569 KEQTS-GQLKKALVLRGANGQELRAQGNARLRYTVTKDGCSKSDGLWGKTVIQYRSQTAARLPVLDLGLMDTGKAEQEFG 1647
EAX10907      799 MDDQA-KNLKKAVVLKGANDLDIKAEGNIRFRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFG 877 
CAF98967      295 MDQKA-GNLKKAIILKGANDLELKAEGNSRFRYTVLEDSCSEANGKWGKTVFEYRTQKTPRLPIVDIAPVDIGGPDQEFG 373 
4AE2_A        169 MDQAS-GNVKKALKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAVRLPIVDIAPYDIGGPDQEFG 247 
5K31_A        247 FDVGPVCF 254 
NP_001029004  836 AEFGPACF 843 
NP_001073461 1686 FEVGPVCF 1693
XP_016790449 1736 FELGPVCF 1743
P20908       1829 FEVGPACF 1836 human
P12107       1797 FEVGPVCF 1804 human
CAG01332     1648 LDIGPVCF 1655
EAX10907      878 VEIGPVCF 885 
CAF98967      374 IDLGPVCF 381 
4AE2_A        248 VDVGPVCF 255 
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