1EHK,3EH3,2FWL


Conserved Protein Domain Family
ba3_CcO_II_C

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cd13913: ba3_CcO_II_C 
Click on image for an interactive view with Cn3D
C-terminal cupredoxin domain of Ba3-like heme-copper oxidase subunit II
The ba3 family of heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and some archaea, which catalyze the reduction of O2 and simultaneously pump protons across the membrane. It has been proposed that archaea acquired heme-copper oxidases through gene transfer from gram-positive bacteria. The ba3 family contains oxidases that lack the conserved residues that form the D- and K-pathways in CcO and ubiquinol oxidase. Instead, they contain a potential alternative K-pathway. Additional proton channels have been proposed for this family of oxidases but none have been identified definitively.
Statistics
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PSSM-Id: 259980
Aligned: 39 rows
Threshold Bit Score: 145.79
Created: 19-Jun-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1: CuA binuclear site [ion binding site], 5 residue positions
Conserved feature residue pattern:H C C H MClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                     #                                  
1EHK_B        69 QAVVQTGpnqYTVYVLAFAFGYqPNPIEVPQGaEIVFKITSPDVIHGFHVEgTNINVEVLPGeVSTVRYTFKrPGEYRII 148 Thermus thermop...
BAB04459      57 PGVTKIDedtYEVAVVAMAFSYqPNTITVPVDkKIIFNVTSTDVTHSFSIVnTNVNMMVVPGlISTKEYTFKeTGHYLIV 136 Bacillus halodu...
BAA31140      57 PGLVKKGeneYELNIVVAAFSFtPNAIEIPKGaKVTINVTSKDVIHGFQIPgTNINMMVEPGyVNSLTATFDePGEYTIL 136 Geobacillus ste...
YP_002769883  57 PGLKQVGdneYDAYMTAFAFGFsPTKMEIPVGaTVNFHVTSPDVIHGFQIPeTNINFMVLPGhISSATHTFDkPGEYLIL 136 Brevibacillus b...
YP_003587950  60 PGLYQVGpneYRAVMIAQMFMYqPNQVTVPAGaTVHFEVTSPDVVHGFEIPgTNVNLMVVPGhITEYTATFRtKMDRVIV 139 Bacillus tuscia...
EKN68121      55 PGVTQIGeneYEVVMTLQIFSFtPNKLEFPAGsTVHFKLTSKDVVHGFEVAgTNLNAMVMPGyVQEITQKFDkPGDYLVL 134 Bacillus azotof...
CCQ95728      57 PGVKKVDenrYEVNLIAQVFSFkPNKVQVPVGkEIVFNVTTKDVVHSFTIVgTNVNMMLIPGyINTAKYTFDkPGKYLVL 136 Clostridium ult...
AFH65144      58 PGLQRLGngeYEANIIAFAFGYkPDVIEIPLGaKVNFNITSSDVVHGFQVVnTTINMMVVPGeVNHLTYTFTePGEYLVI 137 Bacillus mucila...
EGL84077      57 PGLVQIDdhtYVANLVAMTFGYrPNTIEIPVGsTVIFEVTSEDVIHSFTIPgTNVNMMVMPGhVNQATHTFTePGSYLVI 136 Bacillus sp. HA6
CCQ98279      59 PGLYPSGsrnYKAAIVAKTFTFlPTEMRIPAGsTVHFEVTSPDVVHGLMIPgTNVNMLVVPGrITQFTYTFKhKGNYYLI 138 Clostridium ult...
Feature 1        #   #   #  #       
1EHK_B       149 CNQYCGLGHQNMFGTIVVK 167 Thermus thermophilus
BAB04459     137 CNEYCGAGHHYMSMEIEVV 155 Bacillus halodurans C-125
BAA31140     137 CNEYCGAGHHMMTARIKVV 155 Geobacillus stearothermophilus
YP_002769883 137 CNEYCGAGHQVMATTIIVK 155 Brevibacillus brevis NBRC 100599
YP_003587950 140 CNEYCGSGHQVMLGRFVVQ 158 Bacillus tusciae DSM 2912
EKN68121     135 CNEYCGAGHQLMSTTITVK 153 Bacillus azotoformans
CCQ95728     137 CNEYCGAGHQLMQMEIEVI 155 Clostridium ultunense
AFH65144     138 CNEYCGAAHEVMMMKLIVK 156 Bacillus mucilaginosus
EGL84077     137 CNEYCGAGHHYMQMTIEVV 155 Bacillus sp. HA6
CCQ98279     139 CNEYCGSGHQLMASRLIVE 157 Clostridium ultunense

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