Conserved Protein Domain Family
CCR4

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COG5239: CCR4 
mRNA deadenylase, 3'-5' endonuclease subunit Ccr4 [RNA processing and modification]
Statistics
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PSSM-Id: 227564
Aligned: 7 rows
Threshold Bit Score: 393.752
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2497217   82 GVDPDCP-PELHFIRRPFLSL-HEA----EPVTg------fRFKLMTYNCLAQALIRRKLFPDS-GDALKWYRRSKVLLN 148 baker's yeast
19074877 130 fntlirdkkllqfcrehntgypppndrlwiectgknvfygdTVSVGTFNILSNIYATRMTYAPS--WVINSEFRREGVLQ 207 Encephalitozoon cun...
19112545  86 PPSNAPPeFNTDFIKREMLSIpNYApfetEKSAl-------DITIMTYNVLAQTNIRRSMFPHS-GEALKWKNRSRMLAN 157 fission yeast
19075401 294 ergweklvsdddddvndnvstsvrdltaadsnkpsttsknlkfTIMSYNVLCERYATSTLYGYTpSWALSWSYRKDLIMQ 373 fission yeast
2497064   67 GKDPDFPtPDLQFIERPFLPInHDNskglTPATiqvtqdslDVKIMTYNTLAQTLIRRDFFPES-GPALKWHKRSKVLVH 145 baker's yeast
6324531    1 ----MFTrRFIPVVQSTKQNIgKYVr----KDAr--------FTLLTYNMLSPSYMWPQVYTYVaEPYKNWSYRHRLLEK 64  baker's yeast
399207   476 INTDGEPqREYDSLQQSTEHLaTDL----AKRT---------FTVLSYNTLCQHYATPKMYRYTpSWALSWDYRRNKLKE 542 baker's yeast
2497217  149 EFK-YYNSDVICLQEIDHIQFQSFWKDEFSKLG-YDGQYYRNATKnhgvaimwrrelfhqvDKMLIDYDkesse-sistr 225 baker's yeast
19074877 208 EIV-LYNVDILCLQEIELYSFFDFYKEQLEMRCnYDSIIYPRGR-----------------VKSVPDKK----------- 258 Encephalitozoon cun...
19112545 158 ELT-YYSPTLGCMQEVDAEFVPNFYKKLLGGLG-YELHFIKGEGKthgimifwksslfkkvQDLTIYYDdhde---lpgr 232 fission yeast
19075401 374 ELG-GYNADIICLQEVDVENYDTFFAPQMSLKG-YKGVHFPKSR-----------------VRTMNEVE----------- 423 fission yeast
2497064  146 ELK-KYRPDVVSLQEVDYNELN-FWQENFHKLG-FDVIFKRHEGKthgllvawnnkkfqldNDWMLDYDnilagnvisar 222 baker's yeast
6324531   65 ELLnTFKADIMCLQEMTARDYEDYWHDSIGVDVnYGSKFISKTPP----------------KYWKKPVK----------- 117 baker's yeast
399207   543 QLL-SYDSDLLCLQEVESKTFEEYWVPLLDKHG-YTGIFHAKAR-----------------AKTMHSKD----------- 592 baker's yeast
2497217  226 TtTNNVGLVLALKFsekvLSNLgkksSKkCGILIGTTHLFWHPFGTYERTRQCYIVLKKMKEFMHRVnvlqnendgdlsh 305 baker's yeast
19074877 259 ---NVDGCAIFWRR------------SK-FRLIAQFPIDFHQKVIQDTRFNTNQELLDRYGKKDNIA------------- 309 Encephalitozoon cun...
19112545 233 MnTKNIGCCVRLER----VDDP----SR--GLFLATTHLFWHPYGSYERLRQGAILVKEVNKMAQSHp-----------s 291 fission yeast
19075401 424 R-RIVDGCATFFKT------------SKyVMHEKMVIEYNQAPSLRRQDIKLTSNMYNRVMTKDNIS------------- 477 fission yeast
2497064  223 TrTKNIALIISLYFk--gITDSs---SR--GIIVANTHLFWHPFGVFERLRQSYLVLQKIQEIKACSky---------ng 286 baker's yeast
6324531  118 ---DMDGVSIFYNLakfdFISSs---GIyLNQLLNVFNQRELKYLYNKKVTLTDGASNVIGEDSLLDvlk-------gkn 184 baker's yeast
399207   593 S-KKVDGCCIFFKR----D-Q-----FK---LITKDAMDFSGAWMKHKKFQRTEDYLNRAMNKDNVA------------- 645 baker's yeast
2497217  306 WFPFFCGDFNSQPFDTPYLSMTSKPVHYRNRAKTVIGCSTSYKFSKVRDGEEGA----------DDEEGGNIEKYGK--- 372 baker's yeast
19074877 310 ----IGALLERPNGQQVLVMNTHIFWDPDYPDIKLLQVLLLVEEIKRVSSRHPNa------------------------- 360 Encephalitozoon cun...
19112545 292 WPVFIAGDFNTEPFDTNFPALTTRPLSICQRATDIIERSMNYVFGESELEEKNAstktendsneDDKEECQSSSTSSvp- 370 fission yeast
19075401 478 ---VITLLENKENGSRLIVANCHIHWDPQFRDVKVIQVAMLMDEIAQVATKFRNmps----kipSDQLKDERPTYPEylk 550 fission yeast
2497064  287 WHSLLMGDFNTEPEEPPYLAITKRPLILKGPIRAMVECSLAYRYSKKRNGEESD----------QDDEECDEKSRGEgh- 355 baker's yeast
6324531  185 QVCLFVSLRHKETGTIFVVLNTHLYWK--YDEVKLTQCMIIMRELSKIIKQLLP---------------GDVKGQERv-- 245 baker's yeast
399207   646 ---LFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQVGVLLDHLETLLKEETS-----------HNFRQDIKKFPV--- 708 baker's yeast
2497217  373 -DQPESPVPEKFHANEEQSELVD-KMAQLHNSLDMRAISLYSVGYKNVHPENAGL-DNDRGEPEISNWANTWRGLLDYLF 449 baker's yeast
19074877 361 -CLLLQGDFNSLRSSSVYKSITT-PVIDFAD--FGDTMQHLSN-QQFGDGLGLND-AYSNQDLGFTNFTPGFKGVIDYIF 434 Encephalitozoon cun...
19112545 371 eSTASTPKKRILHVQNDYVPHYR-SFYQQHE-QNPVLFSLYSVGYKLVHPENA---KNTFDHPAFTNWAHAYQGHLDYIF 445 fission yeast
19075401 551 iPILICGDFNSVQGSGVYDFLSSgSISQNHEDFMNNDYGEYTV-NGRSHAFNLKSaYGESEALSFTNYTPGFKGAIDHIW 629 fission yeast
2497064  356 sDQPQNPKPESFTATKEEKALVN-QLVALHNSLHVKGVSLYGIGYGKVHPENA---NGSHGEPGLSNWANTWCGLLDYIF 431 baker's yeast
6324531  246 -KILFTGDLNSTRDSLVVNFLQG--QIVSHG-----DLNLINPMRPYLDRCVYD--DIPKDYFVHTCYSGKLKGIFDYVW 315 baker's yeast
399207   709 ---LICGDFNSYINSAVYELINT-GRVQIHQEGNGRDFGYMSE-KNFSHNLALKSsYNCIGELPFTNFTPSFTDVIDYIW 783 baker's yeast
2497217  450 YVKKwdpqSNCQEVETLGDFEKENKVKCRGFLRMPPGNEMtkhgQPHVGEYASDHLSMVCDLELQL 515 baker's yeast
19074877 435 YGGG------ISLASVLSPVEDEYTENVAGLPNMHFPSDH----IFLGAKFAFPNKNISQNAFGRN 490 Encephalitozoon cuniculi
19112545 446 VMNR----DTSLQTPENQVVEG---IKLKALLRVPLPSEMke-aEPLEGRYPSDHVALMANVQIV- 502 fission yeast
19075401 630 YTGN-----SLEVTGLLKGVDKDYLSGVVGFPNAHFPSDH----ICLLAEFKVKQEKTPLPSSKFN 686 fission yeast
2497064  432 YIEGdh-nQDTRQKEPLNAFEGNNNVKIIGYLRMPCAQEMpkhsQPFEGEYASDHISLMCQIRLFF 496 baker's yeast
6324531  316 YHDSd--fLLTKILTGNEVSDELLASNQLGLPNENHPSDH----IPLLTEFKIL------------ 363 baker's yeast
399207   784 FSTH-----ALRVRGLLGEVDPEYESKFIGFPNDKFPSDH----IPLLARFEFMKTNTGSKKV--- 837 baker's yeast
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