Conserved Protein Domain Family
N_to_GlyXaaXaa

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NF033172: N_to_GlyXaaXaa 
collagen-like repeat preface domain
All protein sequence used in the seed alignment for this model comes from the N-terminal region of proteins with extended collagen-like Gly-rich repeat regions, and occur in Firmicutes.
Statistics
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PSSM-Id: 467978
Aligned: 29 rows
Threshold Bit Score: 75.4034
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_071734228   30 ITSQQLSQLITLLNSLVSAITAFFANPSNANRLALLDLFNQFLIFLNSL-LPSPEVNFLKQLTQSIIVLl----qSPAPN 104  Bacillus nitr...
WP_053492608   25 VGRNQAARFITLIRQLTPLIRAFVEYAANENFTLIKIQLQSLNELVSGMrFSLRERRALREVVQQIARI------SNADN 98   Bacillus sp. ...
WP_052511822   32 MRLDELERYSQLLTALQKTAPAAISQSIILNISALQRTLRDLLQFVNNSsFPGVVKAQLQSILELTIASs----eVTPFV 107  Paenibacillus...
WP_063480741   47 ISPNRLRTLIGILEELNVNTLRVLTDPTPENILAFKDNIRALADFVRSLnMRSAARALLLIQLNLLLTA-------PTFV 119  Paenibacillus...
WP_068606021   29 IKLQQRIDVIELIQKLNELLPNLLKNPSESVIAETKSVLRGLDRWIIRAcLPTAVRVPVRSSIRNILSTl----rTFKLS 104  Paenibacillus...
WP_065481731   23 ITPAQETQFVALMQQLQTAINTYLNNPVPVNNTALRTSLTNLYNFLLNEfPTQQGRDATRYTLFLLLTVnnrlasATPSQ 102  Bacillus thur...
WP_061679244   30 ITSTQLGQLITLLNSLISAIAAFFANPSDANRLNLLNLFTQLLNLLNGLaP-SPEGNYLKQLIQSIINVl----qSPNPD 104  Bacillus mobilis
WP_001989953   30 ITSLQISQLIFLLNSLIAAIAAFFVNPSDANRVVLINLFNQLLVLIQSLaP-SPEGNYLIQLIQNILLLl----qSLTPN 104  Bacillus cereus
WP_070128376   29 PSNSQLNELISLLNALIIAIPTFFATPNAANKLILINLFNQLLDLLN-LlLPTTEGDYLKQLVQSILNEl----qSPNTD 103  Bacillus myco...
WP_016100332   29 PSNSQLIELQSILVALSTAIPTFLTTPNATNKAALVDLFNQLLILLNSLiP-TAEVDYLKELIESILAVl----tPITPN 103  Bacillus cereus
WP_071734228  105 LGQLSTLLQQFYSALAQFFFALdlipvscnsNIDSATLQLLFSLLIQLINATPGA 159  Bacillus nitratireducens
WP_053492608   99 HQEILTRLNGVLILFQSYGERI---------GVGSVIGPEIATSQHEVQMLLTNS 144  Bacillus sp. FJAT-18019
WP_052511822  108 KLNTIINLQDLLDDLLEITLLL---------LILPEEKDRLVGIIRATGVALTTA 153  Paenibacillus sp. TCA20
WP_063480741  120 VVSTAIQISQLLVNIVLVVQQI---------TQNVQIQQNITQIINNIQNIVDNV 165  Paenibacillus glucanolyticus
WP_068606021  105 ANATAIKLQVLVNDLTDALTVV---------TTTTQIRLEFFGQLSIINQTLSTV 150  Paenibacillus swuensis
WP_065481731  103 GSQIAIMLQSLYTTLSILVSEF---------IMTNVNRNLILNILSGLVSTTSIV 148  Bacillus thuringiensis
WP_061679244  105 ISELLSLLQQFYSALAPFFFSL---------IIDPASLQLLLNLLTQLIGATPGA 150  Bacillus mobilis
WP_001989953  105 LTQIAILLQQFYSALATFFFTL---------IIDSSVLQLLLNLVIQLINVTPIP 150  Bacillus cereus
WP_070128376  104 LGQLAVLLQQFYSALADFFFSIq-------tCFAPSTLRLLFNLLTQLISLTPIP 151  Bacillus mycoides
WP_016100332  104 TAQLIVLLQQFYSALADYFF-----------SIKTCFAPSTLRLLFDLLTLLISL 147  Bacillus cereus
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