Conserved Protein Domain Family
ABC_choXWV_perm

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TIGR03416: ABC_choXWV_perm 
choline ABC transporter, permease protein
Statistics
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PSSM-Id: 188318
Aligned: 11 rows
Threshold Bit Score: 363.974
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011454623  35 ECKLRIGDGAEAVFDWLQSNGAFIFDAMAVALEAMIEVFLAILQEPPntswfqdirlrdaaflypqdwhPFLVIAIFTAL 114 Jannaschia sp. ...
WP_011337290  13 DHKLPVGRWSKMGFDWLNANGGPFFNLISRMMQAVIDAMLNVLDAAP----------------------PLLVIAILAAL 70  Rhodobacter sph...
WP_011536175   4 DQKIPLGQYIASFVEWLTQNGASYFDAIAQGLEFMIHGVTSALTWFN----------------------PFVLIALFAAL 61  Pseudomonas ent...
WP_011426322   6 DSKIPIGPLAKSFVDWLTSNGEWFFNQLAFLLSHVIDGLLLVLQKPH----------------------PLIVIAVISAL 63  Rhizobium etli
WP_011221750   6 EHKIPLGEWMATFVDWLTYNASGFFDSLSYTLESMIMLLVDLFKWFP----------------------PAVPIVMTALL 63  Photobacterium ...
WP_011394821  12 syKLPVGDWMESLVDMLIDHGGAFFDGVAICLEYLIQGLTEALLFAP----------------------PWLFIAVIVAF 69  Hahella chejuensis
WP_004691042   6 DYKIPVGPTAKSVVDWLTTHLGLFFDTLAAVMQSLIDDLLYLLELPH----------------------PLLLIAIFAII 63  Brucella
WP_006314638 100 ENRLPIGRYAKEAIDWLTGNLAFFFDWLSFIFQSVINALLYVLQAPH----------------------PLIIVAIVTAL 157 Agrobacterium s...
WP_013066638  46 KWKIPVGPWAKHVFEWMRDSFSIVFDHLAAIFETLIDGIMAIFATPLdiswitgaae--ytplyppeyqPFIMTGFFLGI 123 Rhodobacter cap...
WP_007177083   2 SEVIPLGAWVDHGVHYLLDHDAKTFDSIGKVIESFAAVIEHGLQAVP----------------------MWALMAFFVGI 59  Burkholderia
WP_010911149   3 DHKIPIGAWGKSFFGFLTDNFDTIFRAFSNGLNFILDGLVDLLLLVP----------------------PVLLALVIAVI 60  Mesorhizobium loti
WP_011454623 115 AWWMHRGWKVPMLVAVGFLFIVNQDYWEETTESLTLVLSACVVCMGVGVPIGIAVAHRPRLYAWMRPVLDLMQTLPTFVY 194 Jannaschia sp. ...
WP_011337290  71 AWILQRNWRVTALVVAGFAFILNQGYWDETMQSLTLIVLACVTCMAIGVPLGIAAAHRPRLYQAMSPVLDLMQTLPTFVY 150 Rhodobacter sph...
WP_011536175  62 AHLIQRKWALTVFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGIAAAHKPMFYTAMRPVLDLMQTVPTFVY 141 Pseudomonas ent...
WP_011426322  64 AFWLRRSIAITLFTCLGLLLIMNQGYWKETTETLALVLASTFVSMVIGIPLGIAAARRAWVYAAMRPVLDLMQTIPTFVY 143 Rhizobium etli
WP_011221750  64 AWFLHRSLSLVIFVVAALLLIMNLGYWEEMIETFVLVLSATMFSVIVGVPIGIAAAHRPWLYTIMRPILDLMQTIPTFVY 143 Photobacterium ...
WP_011394821  70 AAWRHRNWSSPLFALIALGLIWNMGYWEETIETLALVLFATGFCVLFGVPIGIAAAHRPWLYRGMRPLLDLMQTIPTFVY 149 Hahella chejuensis
WP_004691042  64 AWLIQRRISVVLLTILGFLFIINQGYWEPTLKTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVY 143 Brucella
WP_006314638 158 SAWTRRSAGMPIFTALGLLLIINLGYWKATTETLALVIAASAVCMIIGIPLGILAARRKWIYAGMRPALDLMQTIPTFVY 237 Agrobacterium s...
WP_013066638 124 SWFLQRRVSILLTVLLGLLYVFNQGYWKPTTESLTLVISACVVCMSLGVPIGIAAAHRPRLYLAMQPILDLMQTLPTFVY 203 Rhodobacter cap...
WP_007177083  60 GLW-RVGWRFALFTLLAMLLIYGTGFWDQMVITLGLTLSSTLISLLLGVPLGIWTAKSRTIEMIVRPVLDLMQTMPAFVY 138 Burkholderia
WP_010911149  61 AWLLQRSRPLAIGVFLGLIFIINQNLWKQTVQTLVLVVAAAAMAMAIGVPLGIWAAHKPKVYRIMLPVLDLMQTLPTFVY 140 Mesorhizobium loti
WP_011454623 195 LIPAIVFFGIGMVPGLIATVIFVLPAPIRLTHLGISSTPQSLLEAADAFGATGSQKLWKVELPYALPQIMTGLNQTIMLS 274 Jannaschia sp. ...
WP_011337290 151 LIPAIVFFGLGMVPGLIATVIFVLPAPIRLTHLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLS 230 Rhodobacter sph...
WP_011536175 142 LIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQELLDAGKAFGCSRRQLLTRIELPHAMPSIAAGITQCIMLS 221 Pseudomonas ent...
WP_011426322 144 LIPALILFGLGMVPGLIATVIFAIPAPIRLTRLGIISTPPSLVEAAVAFGARPMQVLRKVELPFAAPQIMAGLTQTIMLS 223 Rhizobium etli
WP_011221750 144 LIPTLVLFGLGVVPGLISTIIFAIAAPIRLTYLGISRVPEELVEAGRAFGASRMKLLFKVELPAAMPNIMAGITQCIMLS 223 Photobacterium ...
WP_011394821 150 LIPTLTLFGLGVVPGLISTVIFAIAAPIRLTHLGITQVPEELLEAGKAFGCKPSVLLLKVEIPAAMSSIMAGVTQCIMLS 229 Hahella chejuensis
WP_004691042 144 LIPAIVFFGIGMVPGLLATVIFVIPAPIRLTQLGISSTPASLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLS 223 Brucella
WP_006314638 238 LIPALVLFGLGMVPGLIATVIFAIPAPVRLTRLGIVSTPPALVEAAVAFGATPSQVLRKVELPFAAPQIMAGLTQTIMLS 317 Agrobacterium s...
WP_013066638 204 LIPAIVFFGIGMVPGLIATVIFVLPAPIRLTHLGVSTTPQPLLEAARAFGATPRQVLWKVELPYALPQIMAGLNQTIMLS 283 Rhodobacter cap...
WP_007177083 139 LIPAAMLFGLGRVPGILSTVIFAMPPAVRLTSLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMTGVNQTIMMA 218 Burkholderia
WP_010911149 141 LIPVLTLFGLGNAPGLIVTIIFVIPTAVRLTHLGVVSVPKSIIEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIMLS 220 Mesorhizobium loti
WP_011454623 275 LSMVVIAALVGADGLGVPVVRALNQVNTGLGFESGFIIVVVAIVLDRTL 323 Jannaschia sp. CCS1
WP_011337290 231 LSMVVIAALVGANGLGVPVVRALNTVNTALGFESGFIIVVVAIVLDRML 279 Rhodobacter sphaeroides
WP_011536175 222 LSMVVIAALVGADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRIC 270 Pseudomonas entomophila
WP_011426322 224 LSMVVIAALVGADGLGVPVVRALNTVNVAKGFEAGLCIVILAIILDRMF 272 Rhizobium etli
WP_011221750 224 LSMVVISALVGADGLGKPVVRALNTVNISQGFEAGLAIVLVAIILDRLC 272 Photobacterium profundum
WP_011394821 230 LSMVVIAALVGADGLGKPVVRALNTVDIATGFEAGLAIVLIAILLDRLF 278 Hahella chejuensis
WP_004691042 224 LSMVVIAALVGADGLGVPVVRGLNSVNISLGFEAGFIIVVVAIVLDRIF 272 Brucella
WP_006314638 318 LSMVVISALVGANGLGVPVVRALNTVNIAMGFEAGLCIVILAIVLDRLF 366 Agrobacterium sp. ATCC 31749
WP_013066638 284 LSMVVIAALVGANGLGVPVVRALNSVNTALGFESGMIIVVVAIVLDRMM 332 Rhodobacter capsulatus
WP_007177083 219 LSMVIIASMVGAGGLGNDVLASIQRLDIGLGFESGLSVVMLAIILDRIT 267 Burkholderia
WP_010911149 221 LSMVVFAALIGAGGLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRMT 269 Mesorhizobium loti
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